Zobrazeno 1 - 10
of 165
pro vyhledávání: '"de Buyl, P."'
The onset of neural induction in the anterior ectoderm of ascidian embryos is regulated at the extracellular level by FGF signaling molecules, which control the acquisition of neural fate through the activation of the ERK pathway. Among the anterior
Externí odkaz:
http://arxiv.org/abs/2410.18143
Autor:
Ortiz, Irene, Dimitropoulou, Ermioni, de Buyl, Pierre, Clerbaux, Nicolas, García-Heras, Javier, Jafarimoghaddam, Amin, Brenot, Hugues, van Gent, Jeroen, Sievers, Klaus, Otero, Evelyn, Loganathan, Parthiban, Soler, Manuel
Aviation's non-CO$_2$ effects, especially the impact of aviation-induced contrails, drive atmospheric changes and can influence climate dynamics. Although contrails are believed to contribute to global warming through their net warming effect, uncert
Externí odkaz:
http://arxiv.org/abs/2409.10166
Publikováno v:
Phys. Rev. E, 105(3), 034133 (2022)
We investigate the motility of a growing population of cells in a idealized setting: we consider a system of hard disks in which new particles are added according to prescribed growth kinetics, thereby dynamically changing the number density. As a re
Externí odkaz:
http://arxiv.org/abs/2110.11315
Autor:
Fouego, Dorota Youmbi, de Buyl, Sophie
We propose a revisited version of the in vivo model of the cyanobacterial circadian clock. Our aim is to address the lack of robustness predicted for the mutant cyanobacteria without transcriptional regulation of the original model. For this, we rely
Externí odkaz:
http://arxiv.org/abs/2204.03950
Publikováno v:
Physics of Fluids 33(8), 083615 (2021)
Molecular dynamics (MD) simulations represent a powerful investigation tool in the field of soft matter. By using shear flows, one can probe the bulk rheology of complex fluids, also beyond the linear response regime, in a way that imitates laborator
Externí odkaz:
http://arxiv.org/abs/2104.12857
Autor:
de Buyl, Pierre
Publikováno v:
Phys. Rev. E 100, 022603 (2019)
Chemically powered self-propelled colloids generate a motor force by converting locally a source of energy into directed motion, a process that has been explored both in experiments and in computational models. The use of active colloids as building
Externí odkaz:
http://arxiv.org/abs/1802.03264
Autor:
Rougier, Nicolas P., Hinsen, Konrad, Alexandre, Frédéric, Arildsen, Thomas, Barba, Lorena, Benureau, Fabien C. Y., Brown, C. Titus, de Buyl, Pierre, Caglayan, Ozan, Davison, Andrew P., Delsuc, Marc André, Detorakis, Georgios, Diem, Alexandra K., Drix, Damien, Enel, Pierre, Girard, Benoît, Guest, Olivia, Hall, Matt G., Henriques, Rafael Neto, Hinaut, Xavier, Jaron, Kamil S, Khamassi, Mehdi, Klein, Almar, Manninen, Tiina, Marchesi, Pietro, McGlinn, Dan, Metzner, Christoph, Petchey, Owen L., Plesser, Hans Ekkehard, Poisot, Timothée, Ram, Karthik, Ram, Yoav, Roesch, Etienne, Rossant, Cyrille, Rostami, Vahid, Shifman, Aaron, Stachelek, Joseph, Stimberg, Marcel, Stollmeier, Frank, Vaggi, Federico, Viejo, Guillaume, Vitay, Julien, Vostinar, Anya, Yurchak, Roman, Zito, Tiziano
Publikováno v:
PeerJ Computer Science 3:e142 (2017)
Computer science offers a large set of tools for prototyping, writing, running, testing, validating, sharing and reproducing results, however computational science lags behind. In the best case, authors may provide their source code as a compressed a
Externí odkaz:
http://arxiv.org/abs/1707.04393
Autor:
Deprez, Laurens, de Buyl, Pierre
Chemotaxis is the response of a particle to a gradient in the chemical composition of the environment. While it was originally observed for biological organisms, it is of great interest in the context of synthetic active particles such as nanomotors.
Externí odkaz:
http://arxiv.org/abs/1701.05020
Autor:
Rossana Bettoni, Clare Hudson, Géraldine Williaume, Cathy Sirour, Hitoyoshi Yasuo, Sophie de Buyl, Geneviève Dupont
Publikováno v:
PLoS Computational Biology, Vol 19, Iss 2, p e1010335 (2023)
How cell specification can be controlled in a reproducible manner is a fundamental question in developmental biology. In ascidians, a group of invertebrate chordates, geometry plays a key role in achieving this control. Here, we use mathematical mode
Externí odkaz:
https://doaj.org/article/9b44006668854b00a4ed2dd7c0f13617
Publikováno v:
Journal of Open Research Software 5, p 3. (2017)
The RMPCDMD software package performs hybrid Molecular Dynamics simulations, coupling Multiparticle Collision Dynamics to model the solvent and Molecular Dynamics to model suspended colloids, including hydrodynamics, thermal fluctuations, and chemica
Externí odkaz:
http://arxiv.org/abs/1608.04904