Rational Design of Mechanism-Based Inhibitors and Activity-Based Probes for the Identification of Retaining α-L-Arabinofuranosidases

Autor: Jean-Guy Berrin, Jos Reijngoud, Marie-Noëlle Rosso, D. Linzel, Herman S. Overkleeft, Alba Nin-Hill, Gideon J. Davies, G. A. Van Der Marel, G.P. van Wezel, Jeroen D. C. Codée, Marta Artola, Mireille Haon, Carme Rovira, Arthur F. J. Ram, Nicholas McGregor

Publikováno v: Journal of the American Chemical Society
Journal of the American Chemical Society, American Chemical Society, 2020, ⟨10.1021/jacs.9b11351⟩
Journal of the American Chemical Society, 142(10), 4648-4662
Journal of the American Chemical Society, 2020, ⟨10.1021/jacs.9b11351⟩

Identifying and characterizing the enzymes responsible for an observed activity within a complex eukaryotic catabolic system remains one of the most significant challenges in the study of biomass-degrading systems. The debranching of both complex hem

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::934d42b8426e125ab3c7e4e95a374cf4
https://hal.archives-ouvertes.fr/hal-02482205

Rice straw hydrolysis using secretomes from novel fungal isolates from Vietnam

Autor: George E Anasontzis, Vu Nguyen Thanh, Dinh Thi My Hang, Lisbeth Olsson, Han Thu Huong, Dang Tat Thanh, Dinh Duc Hien, Nguyen Thanh Thuy

Publikováno v: Biomass and Bioenergy
Biomass and Bioenergy, Elsevier, 2017, 99, pp.11-20. ⟨10.1016/j.biombioe.2017.02.008⟩
Biomass and Bioenergy, 2017, 99, pp.11-20. ⟨10.1016/j.biombioe.2017.02.008⟩

With a production of 39 million metric tons each year, rice is one of the main agricultural products of Vietnam. Thus, rice straw is a significant by-product, whose use in a biorefinery process would contribute to the bio-based transformation of the

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::adf3874b2a038b021bdcc764f0b3f8d4
https://hal.archives-ouvertes.fr/hal-01612491

Inactivation of cellobiose dehydrogenases modifies the cellulose degradation mechanism of Podospora anserina

Autor: David Navarro, Kevin D. Hyde, Valérie Gautier, Didier Chevret, Laetitia Chan Ho Tong, Narumon Tangthirasunun, Philippe Silar, Jean-Guy Berrin, Sona Garajova

Publikováno v: Applied and Environmental Microbiology
Applied and Environmental Microbiology, American Society for Microbiology, 2016, 83 (2), ⟨10.1128/AEM.02716-16⟩
Applied and Environmental Microbiology, American Society for Microbiology, 2016, 83 (2), pp.e02716. ⟨10.1128/AEM.02716-16⟩
Applied and Environmental Microbiology, American Society for Microbiology, 2017, 83 (2), pp.e02716. ⟨10.1128/AEM.02716-16⟩
Applied and Environmental Microbiology, 2016, 83 (2), pp.e02716. ⟨10.1128/AEM.02716-16⟩

Conversion of biomass into high-value products, including biofuels, is of great interest to developing sustainable biorefineries. Fungi are an inexhaustible source of enzymes to degrade plant biomass. Cellobiose dehydrogenases (CDHs) play an importan

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::b020580b32ad8db29335ae306f60551d
https://hal.archives-ouvertes.fr/hal-01595461

Visual comparative omics of fungi for plant biomass deconstruction

Autor: Shingo Miyauchi, David Navarro, Igor V. Grigoriev, Anna Lipzen, Robert Riley, Didier Chevret, Sacha Grisel, Jean-Guy BERRIN, Bernard Henrissat, Marie-Noëlle Rosso

Publikováno v: Frontiers in microbiology
Frontiers in microbiology, Frontiers Research Foundation, 2016, 7, pp.1335. ⟨10.3389/fmicb.2016.01335⟩
Frontiers in Microbiology
Frontiers in Microbiology, Frontiers Media, 2016, 7, pp.1335. ⟨10.3389/fmicb.2016.01335⟩
Frontiers in microbiology, vol 7, iss AUG
Frontiers in Microbiology, Vol 7 (2016)
Frontiers in Microbiology (7), 1335. (2016)
Miyauchi, S; Navarro, D; Grigoriev, IV; Lipzen, A; Riley, R; Chevret, D; et al.(2016). Visual comparative omics of fungi for plant biomass deconstruction. Frontiers in Microbiology, 7(AUG). doi: 10.3389/fmicb.2016.01335. Lawrence Berkeley National Laboratory: Retrieved from: http://www.escholarship.org/uc/item/8gf166b6
Frontiers in Microbiology, 2016, 7, pp.1335. ⟨10.3389/fmicb.2016.01335⟩

Wood-decay fungi are able to decompose plant cell wall components such as cellulose, hemicelluloses and lignin. Such fungal capabilities may be exploited for the enhancement of directed enzymatic degradation of recalcitrant plant biomass. The compara

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::74cb9bf5a8f36003fb89b79ab431e30c
https://hal-amu.archives-ouvertes.fr/hal-01446771/document

Insights into Exo- and Endoglucanase Activities of Family 6 Glycoside Hydrolases from Podospora anserina

Autor: Jean-Guy Berrin, Mathieu Bey, Bernard Henrissat, Annick Doan, Senta Heiss-Blanquet, Julia Feliu, Laetitia Poidevin, Eric Record, Pedro M. Coutinho

Publikováno v: Applied and Environmental Microbiology
Applied and Environmental Microbiology, American Society for Microbiology, 2013, 79 (14), pp.4220-4229. ⟨10.1128/AEM.00327-13⟩
Applied and Environmental Microbiology, 2013, 79 (14), pp.4220-4229. ⟨10.1128/AEM.00327-13⟩
Applied and Environmental Microbiology 14 (79), 4220-4229. (2013)

The ascomycete Podospora anserina is a coprophilous fungus that grows at late stages on droppings of herbivores. Its genome encodes a large diversity of carbohydrate-active enzymes. Among them, four genes encode glycoside hydrolases from family 6 (GH

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::533143e30328ffecf8629139afcff867
https://europepmc.org/articles/PMC3697498/