Zobrazeno 1 - 10
of 9 174
pro vyhledávání: '"contig"'
Autor:
Du Y; Department of Quantitative and Computational Biology, University of Southern California, Los Angeles, California, USA., Zuo W; Department of Quantitative and Computational Biology, University of Southern California, Los Angeles, California, USA., Sun F; Department of Quantitative and Computational Biology, University of Southern California, Los Angeles, California, USA.
Publikováno v:
Journal of computational biology : a journal of computational molecular cell biology [J Comput Biol] 2024 Oct; Vol. 31 (10), pp. 1008-1021. Date of Electronic Publication: 2024 Sep 09.
Autor:
Pu L; The Blavatnik School of Computer Science, Tel Aviv University, Tel Aviv, Israel.; School of Computer Science and Technology, Shandong University, Qingdao, China., Shamir R; The Blavatnik School of Computer Science, Tel Aviv University, Tel Aviv, Israel.
Publikováno v:
Nucleic acids research [Nucleic Acids Res] 2024 Oct 28; Vol. 52 (19), pp. e94.
Autor:
Kutuzova S; Department of Computer Science, University of Copenhagen, Universitetsparken 1, Copenhagen, 2100, Denmark.; The Novo Nordisk Foundation Center for Protein Research, University of Copenhagen, Blegdamsvej 3A, Copenhagen, 2200, Denmark.; The Novo Nordisk Foundation Center for Basic Metabolic Research, University of Copenhagen, Blegdamsvej 3A, Copenhagen, 2200, Denmark., Nielsen M; Department of Computer Science, University of Copenhagen, Universitetsparken 1, Copenhagen, 2100, Denmark., Piera P; The Novo Nordisk Foundation Center for Protein Research, University of Copenhagen, Blegdamsvej 3A, Copenhagen, 2200, Denmark.; The Novo Nordisk Foundation Center for Basic Metabolic Research, University of Copenhagen, Blegdamsvej 3A, Copenhagen, 2200, Denmark., Nissen JN; The Novo Nordisk Foundation Center for Protein Research, University of Copenhagen, Blegdamsvej 3A, Copenhagen, 2200, Denmark. jakob.nissen@sund.ku.dk.; The Novo Nordisk Foundation Center for Basic Metabolic Research, University of Copenhagen, Blegdamsvej 3A, Copenhagen, 2200, Denmark. jakob.nissen@sund.ku.dk., Rasmussen S; The Novo Nordisk Foundation Center for Protein Research, University of Copenhagen, Blegdamsvej 3A, Copenhagen, 2200, Denmark. srasmuss@sund.ku.dk.; The Novo Nordisk Foundation Center for Basic Metabolic Research, University of Copenhagen, Blegdamsvej 3A, Copenhagen, 2200, Denmark. srasmuss@sund.ku.dk.; The Novo Nordisk Foundation Center for Genomic Mechanisms of Disease, Broad Institute of MIT and Harvard, Cambridge, 02142, MA, USA. srasmuss@sund.ku.dk.
Publikováno v:
Nature communications [Nat Commun] 2024 Sep 27; Vol. 15 (1), pp. 8357. Date of Electronic Publication: 2024 Sep 27.
Autor:
Wang D; Area of Ecology and Biodiversity, School of Biological Sciences, The University of Hong Kong, 999077, Hong Kong SAR., Rastas P; Institute of Biotechnology, University of Helsinki, Helsinki FI-00014, Finland., Yi X; Area of Ecology and Biodiversity, School of Biological Sciences, The University of Hong Kong, 999077, Hong Kong SAR., Löytynoja A; Institute of Biotechnology, University of Helsinki, Helsinki FI-00014, Finland.; Organismal and Evolutionary Biology Research Programme, Faculty of Biological and Environmental Sciences, University of Helsinki, Helsinki FI-00014, Finland., Kivikoski M; Ecological Genetics Research Unit, Organismal and Evolutionary Biology Research Programme, Faculty of Biological and Environmental Sciences, University of Helsinki, Helsinki FI-00014, Finland.; Department of Computer Science, University of Helsinki, Helsinki FI-00014, Finland., Feng X; Institute of Biotechnology, University of Helsinki, Helsinki FI-00014, Finland.; Ecological Genetics Research Unit, Organismal and Evolutionary Biology Research Programme, Faculty of Biological and Environmental Sciences, University of Helsinki, Helsinki FI-00014, Finland., Reid K; Area of Ecology and Biodiversity, School of Biological Sciences, The University of Hong Kong, 999077, Hong Kong SAR., Merilä J; Area of Ecology and Biodiversity, School of Biological Sciences, The University of Hong Kong, 999077, Hong Kong SAR.; Ecological Genetics Research Unit, Organismal and Evolutionary Biology Research Programme, Faculty of Biological and Environmental Sciences, University of Helsinki, Helsinki FI-00014, Finland.
Publikováno v:
G3 (Bethesda, Md.) [G3 (Bethesda)] 2024 Aug 07; Vol. 14 (8).
Autor:
Darabi A; Department of Computer and Data Sciences, Faculty of Mathematical Sciences, Shahid Beheshti University, Tehran, Iran., Sobhani S; Department of Computer and Data Sciences, Faculty of Mathematical Sciences, Shahid Beheshti University, Tehran, Iran.; School of Biological Sciences, Institute for Research in Fundamental Sciences (IPM), Tehran, Iran., Aghdam R; School of Biological Sciences, Institute for Research in Fundamental Sciences (IPM), Tehran, Iran.; Wisconsin Institute for Discovery, University of Wisconsin-Madison, Madison, WI, 53715, USA., Eslahchi C; Department of Computer and Data Sciences, Faculty of Mathematical Sciences, Shahid Beheshti University, Tehran, Iran. ch-eslahchi@sbu.ac.ir.; School of Biological Sciences, Institute for Research in Fundamental Sciences (IPM), Tehran, Iran. ch-eslahchi@sbu.ac.ir.
Publikováno v:
BMC bioinformatics [BMC Bioinformatics] 2024 Jul 16; Vol. 25 (1), pp. 241. Date of Electronic Publication: 2024 Jul 16.
Autor:
Jayakumar V; Department of Biosciences and Informatics, Keio University, Yokohama, Kanagawa, 223-8522, Japan., Nishimura O; Laboratory for Phyloinformatics, RIKEN Center for Biosystems Dynamics Research, Minatojimaminami-machi 2-2-3, Kobe, Hyogo, 650-0047, Japan., Kadota M; Laboratory for Phyloinformatics, RIKEN Center for Biosystems Dynamics Research, Minatojimaminami-machi 2-2-3, Kobe, Hyogo, 650-0047, Japan., Hirose N; RIKEN Center for Integrative Medical Science Preventive Medicine and Applied Genomics Unit, 1-7-22 Suehiro-cho, Tsurumi-ku, Yokohama, 230-0045, Japan.; Research Center for Genome & Medical Sciences, Tokyo Metropolitan Institute of Medical Science, 2-1-6 Kamikitazawa, Setagaya-ku, Tokyo, 156-8506, Japan.; Institute for the Advanced Study of Human Biology, Kyoto University, Yoshida-Konoe-cho, Sakyo-ku, Kyoto, 606-8501, Japan., Sano H; RIKEN Center for Integrative Medical Science Preventive Medicine and Applied Genomics Unit, 1-7-22 Suehiro-cho, Tsurumi-ku, Yokohama, 230-0045, Japan.; RIKEN Center for Integrative Medical Sciences RIKEN-IFOM Joint Laboratory for Cancer Genomics, 1-7-22 Suehiro-cho, Tsurumi-ku, Yokohama, 230-0045, Japan., Murakawa Y; RIKEN Center for Integrative Medical Sciences RIKEN-IFOM Joint Laboratory for Cancer Genomics, 1-7-22 Suehiro-cho, Tsurumi-ku, Yokohama, 230-0045, Japan.; RIKEN Preventive Medicine and Diagnosis Innovation Program, 1-7-22 Suehiro-cho, Tsurumi-ku, Yokohama, 230-0045, Japan.; Institute for the Advanced Study of Human Biology, Kyoto University, Yoshida-Konoe-cho, Sakyo-ku, Kyoto, 606-8501, Japan.; Department of Medical Systems Genomics, Graduate School of Medicine, Kyoto University, Yoshida-Konoe-cho, Sakyo-ku, Kyoto, 606-8501, Japan.; IFOM-the FIRC Institute of Molecular Oncology, Milan, Italy., Yamamoto Y; RIKEN Center for Integrative Medical Sciences Laboratory for Comprehensive Genomic Analysis, 1-7-22 Suehiro-cho, Tsurumi-ku, Yokohama, 230-0045, Japan., Nakaya M; Department of Stem Cells and Human Disease Models, Research Center for Animal Life Science, Shiga University of Medical Science, Shiga, 520-2192, Japan.; Institute for the Advanced Study of Human Biology (WPI-ASHBi), Kyoto University, Kyoto, 606-8501, Japan., Tsukiyama T; Department of Stem Cells and Human Disease Models, Research Center for Animal Life Science, Shiga University of Medical Science, Shiga, 520-2192, Japan.; Institute for the Advanced Study of Human Biology (WPI-ASHBi), Kyoto University, Kyoto, 606-8501, Japan., Seita Y; Department of Stem Cells and Human Disease Models, Research Center for Animal Life Science, Shiga University of Medical Science, Shiga, 520-2192, Japan., Nakamura S; Department of Stem Cells and Human Disease Models, Research Center for Animal Life Science, Shiga University of Medical Science, Shiga, 520-2192, Japan.; Institute for the Advanced Study of Human Biology (WPI-ASHBi), Kyoto University, Kyoto, 606-8501, Japan., Kawai J; RIKEN Preventive Medicine and Diagnosis Innovation Program, 1-7-22 Suehiro-cho, Tsurumi-ku, Yokohama, 230-0045, Japan., Sasaki E; Central Institute for Experimental Animals, Department of Marmoset Biology and Medicine, Central Institute for Experimental Animals, 3-25-12, Tonomachi, Kawasaki-ku, Kawasaki, 210-0821, Japan., Ema M; Department of Stem Cells and Human Disease Models, Research Center for Animal Life Science, Shiga University of Medical Science, Shiga, 520-2192, Japan.; Institute for the Advanced Study of Human Biology (WPI-ASHBi), Kyoto University, Kyoto, 606-8501, Japan., Kuraku S; Laboratory for Phyloinformatics, RIKEN Center for Biosystems Dynamics Research, Minatojimaminami-machi 2-2-3, Kobe, Hyogo, 650-0047, Japan., Kawaji H; RIKEN Center for Integrative Medical Science Preventive Medicine and Applied Genomics Unit, 1-7-22 Suehiro-cho, Tsurumi-ku, Yokohama, 230-0045, Japan. hideya.kawaji@riken.jp.; Research Center for Genome & Medical Sciences, Tokyo Metropolitan Institute of Medical Science, 2-1-6 Kamikitazawa, Setagaya-ku, Tokyo, 156-8506, Japan. hideya.kawaji@riken.jp.; RIKEN Preventive Medicine and Diagnosis Innovation Program, 1-7-22 Suehiro-cho, Tsurumi-ku, Yokohama, 230-0045, Japan. hideya.kawaji@riken.jp., Sakakibara Y; Department of Biosciences and Informatics, Keio University, Yokohama, Kanagawa, 223-8522, Japan. yasu@bio.keio.ac.jp.
Publikováno v:
Scientific data [Sci Data] 2021 Jun 28; Vol. 8 (1), pp. 159. Date of Electronic Publication: 2021 Jun 28.
Autor:
Lee YG; Department of Integrated Omics for Biomedical Science, WCU Graduate School, Yonsei University, Seoul, Republic of Korea., Lee JY; Department of Biochemistry, College of Life Science and Technology, Yonsei University, Seoul, Republic of Korea., Kim J; Department of Biology, University of Pennsylvania, Philadelphia, PA, USA., Kim YJ; Department of Integrated Omics for Biomedical Science, WCU Graduate School, Yonsei University, Seoul, Republic of Korea. yjkim@yonsei.ac.kr.; Department of Biochemistry, College of Life Science and Technology, Yonsei University, Seoul, Republic of Korea. yjkim@yonsei.ac.kr.
Publikováno v:
BMC biology [BMC Biol] 2020 Nov 13; Vol. 18 (1), pp. 167. Date of Electronic Publication: 2020 Nov 13.
Autor:
Alonge M; Department of Computer Science, Johns Hopkins University, Baltimore, Maryland 21218 malonge11@gmail.com salzberg@jhu.edu., Shumate A; Department of Biomedical Engineering, Johns Hopkins University, Baltimore, Maryland 21218.; Center for Computational Biology, Whiting School of Engineering, Johns Hopkins University, Baltimore, Maryland 21211., Puiu D; Department of Biomedical Engineering, Johns Hopkins University, Baltimore, Maryland 21218.; Center for Computational Biology, Whiting School of Engineering, Johns Hopkins University, Baltimore, Maryland 21211., Zimin AV; Department of Biomedical Engineering, Johns Hopkins University, Baltimore, Maryland 21218.; Center for Computational Biology, Whiting School of Engineering, Johns Hopkins University, Baltimore, Maryland 21211., Salzberg SL; Department of Computer Science, Johns Hopkins University, Baltimore, Maryland 21218 malonge11@gmail.com salzberg@jhu.edu.; Department of Biomedical Engineering, Johns Hopkins University, Baltimore, Maryland 21218.; Center for Computational Biology, Whiting School of Engineering, Johns Hopkins University, Baltimore, Maryland 21211.; Department of Biostatistics, Bloomberg School of Public Health, Johns Hopkins University, Baltimore, Maryland 21205.
Publikováno v:
Genetics [Genetics] 2020 Oct; Vol. 216 (2), pp. 599-608. Date of Electronic Publication: 2020 Aug 12.
Autor:
Asalone KC; Biology Department, American University, Washington DC, United States of America., Ryan KM; Biology Department, American University, Washington DC, United States of America., Yamadi M; Biology Department, American University, Washington DC, United States of America., Cohen AL; Biology Department, American University, Washington DC, United States of America., Farmer WG; Biology Department, American University, Washington DC, United States of America., George DJ; Biology Department, American University, Washington DC, United States of America., Joppert C; Biology Department, American University, Washington DC, United States of America., Kim K; Biology Department, American University, Washington DC, United States of America., Mughal MF; Biology Department, American University, Washington DC, United States of America., Said R; Biology Department, American University, Washington DC, United States of America., Toksoz-Exley M; Mathematics and Statistics Department, American University, Washington DC, United States of America., Bisk E; Office of Information Technology, American University, Washington DC, United States of America., Bracht JR; Biology Department, American University, Washington DC, United States of America.
Publikováno v:
PLoS computational biology [PLoS Comput Biol] 2020 Jul 31; Vol. 16 (7), pp. e1008104. Date of Electronic Publication: 2020 Jul 31 (Print Publication: 2020).
Autor:
Paris M; Aix-Marseille Université, CNRS, IBDM, Institut de Biologie du Développement de Marseille, Marseille Cedex 9, France.; IGFL, Institut de Génomique Fonctionnelle de Lyon, Université de Lyon, Ecole Normale Supérieure de Lyon, CNRS, Université Claude Bernard Lyon 1, UMR 5242, 69364, Lyon Cedex 07, France., Boyer R; Aix-Marseille Université, CNRS, IBDM, Institut de Biologie du Développement de Marseille, Marseille Cedex 9, France.; INRA, US 1426, GeT-PlaGe, Genotoul, Castanet-Tolosan, France., Jaenichen R; Ludwig-Maximilians Universität München, Fakultät für Biologie, Biozentrum, Grosshaderner Strasse 2, 82152, Planegg-Martinsried, Germany., Wolf J; Ludwig-Maximilians Universität München, Fakultät für Biologie, Biozentrum, Grosshaderner Strasse 2, 82152, Planegg-Martinsried, Germany.; Department of Ecology and Genetics, Evolutionary Biology Centre, Uppsala University, Norbyvägen 14-18, 75236, Uppsala, Sweden., Karageorgi M; Aix-Marseille Université, CNRS, IBDM, Institut de Biologie du Développement de Marseille, Marseille Cedex 9, France.; Department of Integrative Biology, University of California, Berkeley, CA, USA., Green J; Aix-Marseille Université, CNRS, IBDM, Institut de Biologie du Développement de Marseille, Marseille Cedex 9, France., Cagnon M; Ludwig-Maximilians Universität München, Fakultät für Biologie, Biozentrum, Grosshaderner Strasse 2, 82152, Planegg-Martinsried, Germany., Parinello H; MGX, MGX, Biocampus Montpellier, CNRS, INSERM, University of Montpellier, Montpellier, France., Estoup A; CBGP, INRA, CIRAD, IRD, Montpellier SupAgro, University of Montpellier, Montpellier, France., Gautier M; CBGP, INRA, CIRAD, IRD, Montpellier SupAgro, University of Montpellier, Montpellier, France. mathieu.gautier@inrae.fr., Gompel N; Ludwig-Maximilians Universität München, Fakultät für Biologie, Biozentrum, Grosshaderner Strasse 2, 82152, Planegg-Martinsried, Germany. gompel@bio.lmu.de., Prud'homme B; Aix-Marseille Université, CNRS, IBDM, Institut de Biologie du Développement de Marseille, Marseille Cedex 9, France. benjamin.prudhomme@univ-amu.fr.
Publikováno v:
Scientific reports [Sci Rep] 2020 Jul 08; Vol. 10 (1), pp. 11227. Date of Electronic Publication: 2020 Jul 08.