Zobrazeno 1 - 10
of 508
pro vyhledávání: '"contact prediction"'
Publikováno v:
BMC Bioinformatics, Vol 25, Iss 1, Pp 1-21 (2024)
Abstract Background Recently, the process of evolution information and the deep learning network has promoted the improvement of protein contact prediction methods. Nevertheless, still remain some bottleneck: (1) One of the bottlenecks is the predict
Externí odkaz:
https://doaj.org/article/d74f8d889e004f7fa76791ed77886725
Autor:
Hongrui ZHAO
Publikováno v:
Meikuang Anquan, Vol 55, Iss 3, Pp 222-230 (2024)
It is of great significance to accurately grasp the charge induction law of rock mass during load failure process for the prediction of dynamic disasters such as rock burst. On the basis of optimizing and improving the acquisition accuracy of charge
Externí odkaz:
https://doaj.org/article/3e7908a052e946e190c710f8af7980d6
Autor:
Yunda Si, Chengfei Yan
Publikováno v:
eLife, Vol 12 (2024)
Accurate prediction of contacting residue pairs between interacting proteins is very useful for structural characterization of protein–protein interactions. Although significant improvement has been made in inter-protein contact prediction recently
Externí odkaz:
https://doaj.org/article/20faab102b134ac0a45c5b858a91fa76
Akademický článek
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Akademický článek
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Publikováno v:
Frontiers in Bioinformatics, Vol 2 (2022)
Computational function prediction is one of the most important problems in bioinformatics as elucidating the function of genes is a central task in molecular biology and genomics. Most of the existing function prediction methods use protein sequences
Externí odkaz:
https://doaj.org/article/779020ddf28649999abb7f25906cf257
Publikováno v:
BMC Bioinformatics, Vol 22, Iss 1, Pp 1-9 (2021)
Abstract Background Protein inter-residue contact and distance prediction are two key intermediate steps essential to accurate protein structure prediction. Distance prediction comes in two forms: real-valued distances and ‘binned’ distograms, wh
Externí odkaz:
https://doaj.org/article/93795621234d4cc69e899420b5353d4b
Publikováno v:
BMC Bioinformatics, Vol 22, Iss 1, Pp 1-17 (2021)
Abstract Background Driven by deep learning, inter-residue contact/distance prediction has been significantly improved and substantially enhanced ab initio protein structure prediction. Currently, most of the distance prediction methods classify inte
Externí odkaz:
https://doaj.org/article/07fe570a92064e6dbb8c42702feff109
Autor:
Hiroyuki Fukuda, Kentaro Tomii
Publikováno v:
BMC Bioinformatics, Vol 21, Iss 1, Pp 1-15 (2020)
Abstract Background Recently developed methods of protein contact prediction, a crucially important step for protein structure prediction, depend heavily on deep neural networks (DNNs) and multiple sequence alignments (MSAs) of target proteins. Prote
Externí odkaz:
https://doaj.org/article/7d40ba83bf324b678afa15d9cd59e217
Publikováno v:
Frontiers in Molecular Biosciences, Vol 8 (2021)
Proteins interact to form complexes. Predicting the quaternary structure of protein complexes is useful for protein function analysis, protein engineering, and drug design. However, few user-friendly tools leveraging the latest deep learning technolo
Externí odkaz:
https://doaj.org/article/fda179f6c3004153a4149e0502728cc9