Zobrazeno 1 - 10
of 24
pro vyhledávání: '"annotation standards"'
Publikováno v:
Frontiers in Plant Science, Vol 14 (2023)
The plastome (plastid genome) represents an indispensable molecular data source for studying phylogeny and evolution in plants. Although the plastome size is much smaller than that of nuclear genome, and multiple plastome annotation tools have been s
Externí odkaz:
https://doaj.org/article/3574cc78e904473c8e79901ade0885c3
Publikováno v:
In Journal of Biomedical Informatics April 2011 44(2):310-318
Autor:
Denis Thieffry, Ioannis Xenarios, Sylvain Soliman, Claudine Chaouiya, Laurence Calzone, Aurélien Naldi, Julio Saez-Rodriguez, Cristina Casals-Casas, Vasundra Touré, Tomáš Helikar, Rahuman S. Malik Sheriff, Gautier Stoll, Martin Kuiper, Vincent Noël, Tom C. Freeman, Anna Niarakis, Marek Ostaszewski, Eugenia Oshurko, Paul Thomas
Publikováno v:
Briefings in Bioinformatics
Briefings in Bioinformatics, Oxford University Press (OUP), 2021, 22 (2), p. 1848-1859. ⟨10.1093/bib/bbaa046⟩
Briefings in Bioinformatics, 2021, 22 (2), pp.1848--1859. ⟨10.1093/bib/bbaa046⟩
Brief Bioinform
Briefings in Bioinformatics, Oxford University Press (OUP), 2021, 22 (2), p. 1848-1859. ⟨10.1093/bib/bbaa046⟩
Briefings in Bioinformatics, 2021, 22 (2), pp.1848--1859. ⟨10.1093/bib/bbaa046⟩
Brief Bioinform
The fast accumulation of biological data calls for their integration, analysis and exploitation through more systematic approaches. The generation of novel, relevant hypotheses from this enormous quantity of data remains challenging. Logical models h
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::c31a424ea86b96e810a0082492c6d0d3
https://hal.inria.fr/hal-02549796
https://hal.inria.fr/hal-02549796
Autor:
Emma C. Teeling, Michael Hiller, Angelique Corthals, Aris Katzourakis, Graham M. Hughes, Dina K. N. Dechmann, Roger D. Ransome, Ksenia Lavrichenko, Lars S. Jermiin, Bogdan M. Kirilenko, Emilia C. Skirmuntt, Sylke Winkler, Martin Pippel, David A. Ray, Sébastien J. Puechmaille, Megan L. Power, Olivier Fedrigo, Gareth Jones, Liliana M. Dávalos, Sonja C. Vernes, Kevin A.M. Sullivan, Erich D. Jarvis, Lucy Burkitt-Gray, Zixia Huang, Juliana G. Roscito, Paolo Devanna, David Jebb, Andrea G. Locatelli, Eugene W. Myers
Publikováno v:
Nature
Jebb, D, Jones, G, Teeling, E C & al., E 2020, ' Six reference-quality genomes reveal evolution of bat adaptations ', Nature, vol. 583, pp. 578-584 . https://doi.org/10.1038/s41586-020-2486-3
Jebb, D, Jones, G, Teeling, E C & al., E 2020, ' Six reference-quality genomes reveal evolution of bat adaptations ', Nature, vol. 583, pp. 578-584 . https://doi.org/10.1038/s41586-020-2486-3
Bats possess extraordinary adaptations, including flight, echolocation, extreme longevity and unique immunity. High-quality genomes are crucial for understanding the molecular basis and evolution of these traits. Here we incorporated long-read sequen
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::557f236093b07bbe58f53f87875e1b68
https://pubmed.ncbi.nlm.nih.gov/32811978
https://pubmed.ncbi.nlm.nih.gov/32811978
Akademický článek
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Autor:
Rachael P. Huntley, Florence Jungo, Tony Sawford, Harminder Sehra, Shyamala Sundaram, Phillippe Lemercier, Bernd Roechert, Silvia Braconi-Quintaje, Guillaume Keller, Madelaine Moinat, Sylvain Poux, Paul Browne, Rolf Apweiler, Kristian B. Axelsen, Kati Laiho, Andre Stutz, Janet James, Catherine Rivoire, Diego Poggioli, Wei Mun Chan, Ivo Pedruzzi, Anne Estreicher, Silvia Jimenez, Paula Duek Roggli, Michael Gardner, Serenella Ferro-Rojas, Claire O'Donovan, Patrick Masson, Maria Jesus Martin, Michele Magrane, Elizabeth Coudert, Benoit Bely, Michael Tognolli, Emmanuel Boutet, Isabelle Cusin, Andrea H. Auchincloss, Yasmin Alam-Faruque, Klemens Pichler, Nadine Gruaz-Gumowski, Chantal Hulo, Ursula Hinz, Ruth Y. Eberhardt, Duncan Legge, L Famiglietti, E. Dimmer, Michael Schneider, Marc Feuermann, Lionel Breuza, Arnaud Gos, Damien Lieberherr, Ghislaine Argoud-Puy, Marie-Claude Blatter, Lydie Bougueleret, Ioannis Xenarios, Alan Bridge
Publikováno v:
Nucleic Acids Research
Nucleic Acids Research, vol. 40, no. Database issue, pp. D565-D570
Nucleic Acids Research, vol. 40, no. Database issue, pp. D565-D570
The GO annotation dataset provided by the UniProt Consortium (GOA: http://www.ebi.ac.uk/GOA) is a comprehensive set of evidenced-based associations between terms from the Gene Ontology resource and UniProtKB proteins. Currently supplying over 100 mil
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::841ea9e8f55688773d2ad655152eaaa4
http://doc.rero.ch/record/290953/files/gkr1048.pdf
http://doc.rero.ch/record/290953/files/gkr1048.pdf
Autor:
P D'Eustachio, Benjamin C. Hitz, Julie Park, Paul Browne, Douglas G. Howe, Cynthia J. Krieger, Kalpana Karra, Stan Laulederkind, Karen R. Christie, Susan Tweedie, Eurie L. Hong, Lydie Bougueleret, Michele Magrane, Cathy R. Gresham, Rolf Apweiler, Lisa Matthews, Dong Li, Philippa J. Talmud, Ioannis Xenarios, J. M. Cherry, Tanya Z. Berardini, Deborah A. Siegele, Rama Balakrishnan, D. Sitnikov, A. Auchinchloss, Selina S. Dwight, Tony Sawford, Paul J. Kersey, Ruth C. Lovering, Ruth Y. Eberhardt, Ursula Hinz, Lakshmi Pillai, Sylvain Poux, Edith D. Wong, Klemens Pichler, Kati Laiho, Malcolm J. Gardner, Stephen G. Oliver, Lionel Breuza, Kara Dolinski, P Lemercier, Kristian B. Axelsen, Midori A. Harris, Adrienne E. Zweifel, H. Drabkin, Guillaume Keller, Marek S. Skrzypek, Daniel M. Staines, Fiona M. McCarthy, Nicholas H. Brown, Mark D. McDowall, Antonia Lock, Mary Shimoyama, Maria C. Costanzo, Teresia Buza, S. Jimenez, Rex L. Chisholm, Paul W. Sternberg, Hui Wang, Nadine Gruaz-Gumowski, Chantal Hulo, Rebecca E. Foulger, Melinda R. Dwinell, Judith A. Blake, Marcus C. Chibucos, B. K. McIntosh, C. D. Amundsen, Jane Lomax, L Famiglietti, Tom Hayman, Michael Tognolli, Eva Huala, James C. Hu, Patrick Masson, Maria Jesus Martin, Benoit Bely, Shuai Weng, Heather C. Wick, E. Dimmer, L. Ni, Catherine Rivoire, Christopher J. Mungall, H. Sehra, P. Duek-Roggli, Maria Victoria Schneider, Dianna G. Fisk, Michael S. Livstone, Ivo Pedruzzi, Shyamala Sundaram, Donna K. Slonim, Isabelle Cusin, Stuart R. Miyasato, Timothy F. Lowry, Varsha K. Khodiyar, Seth Carbon, Elisabeth Coudert, Jürg Bähler, Juancarlos Chan, Evelyn Camon, Daniel P. Renfro, Anne Estreicher, M. C. Blatter, Robert S. Nash, P Gaudet, Sven Heinicke, K. Van Auken, Stacia R. Engel, Alan Bridge, Ralf Stephan, Mary E. Dolan, Shane C. Burgess, Petra Fey, Shur-Jen Wang, Damien Lieberherr, Duncan Legge, P. Porras Millán, Andre Stutz, Yasmin Alam-Faruque, Gail Binkley, Bernd Roechert, S. Branconi-Quintaje, Ghislaine Argoud-Puy, S. Basu, Kim Rutherford, M. Moinat, Monte Westerfield, Arnaud Gos, Eleanor J Stanley, Valerie Wood, Ranjana Kishore, Diego Poggioli, S. Ferro-Rojas, Victoria Petri, Florence Jungo, Suzanna E. Lewis, Emmanuel Boutet, Warren A. Kibbe, M Feuermann, Claire O'Donovan, W. M. Chan, J. James, David P. Hill, Rachael P. Huntley, M. Gwinn Giglio, Paul Thomas, Jodi E. Hirschman, Paola Roncaglia
Publikováno v:
Nucleic Acids Research
Nucleic Acids Research, vol. 40, no. Database issue, pp. D559-D564
Nucleic Acids Research, vol. 40, no. Database issue, pp. D559-D564
The Gene Ontology (GO) (http://www.geneontology.org) is a community bioinformatics resource that represents gene product function through the use of structured, controlled vocabularies. The number of GO annotations of gene products has increased due
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::5585f546fdf0ce700258904074512169
https://doi.org/10.1093/nar/gkr1028
https://doi.org/10.1093/nar/gkr1028
Publikováno v:
Journal of Biomedical Informatics. 44:310-318
Information processing algorithms require significant amounts of annotated data for training and testing. The availability of such data is often hindered by the complexity and high cost of production. In this paper, we investigate the benefits of a s
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::b1dd75c138f59dfd7bc9f0fbf9608f7c
https://doi.org/10.1016/j.jbi.2010.11.001
https://doi.org/10.1016/j.jbi.2010.11.001
Autor:
Michailovsky, Boyd, Mazaudon, Martine, Michaud, Alexis, Guillaume, Séverine, François, Alexandre, Adamou, Evangelia
Publikováno v:
Language Documentation & Conservation
Language Documentation & Conservation, University of Hawaiʻi Press 2014, 8, pp.119-135
Language Documentation & Conservation, University of Hawaiʻi Press 2014, 8, pp.119-135
International audience; The Pangloss Collection is a language archive developed since 1994 at the Langues et Civilisations à Tradition Orale (LACITO) research group of the French Centre National de la Recherche Scientifique (CNRS). It contributes to
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=dedup_wf_001::6f4aaf3229624c9639593883db108460
https://halshs.archives-ouvertes.fr/halshs-01003734/document
https://halshs.archives-ouvertes.fr/halshs-01003734/document
Publikováno v:
Addi. Archivo Digital para la Docencia y la Investigación
instname
instname
This document presents the current draft of KAF: Kyoto Annotation Framework to be used within the KYOTO project. KAF aims to provide a reference format for the representation of semantic annotations.
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=dedup_wf_001::720a9af794552e769e618d9f2062775d
http://hdl.handle.net/10810/4624
http://hdl.handle.net/10810/4624