Zobrazeno 1 - 10
of 41
pro vyhledávání: '"Zhifeng Jing"'
Publikováno v:
ACS Omega, Vol 5, Iss 19, Pp 11005-11012 (2020)
Externí odkaz:
https://doaj.org/article/a8d5cdb2f11b4d658ef4f52fbfc868ea
Publikováno v:
Adsorption Science & Technology, Vol 34 (2016)
The adsorption isotherm of n -perfluorohexane on BAM-P109 activated carbon was predicted using an ab initio force field and a slit-like pore model representing the activated carbon. The force field parameters were derived from data calculated using q
Externí odkaz:
https://doaj.org/article/b35caf5521304e268cf31dd09d440048
Autor:
Yazdan Maghsoud, Erik Antonio Vázquez-Montelongo, Xudong Yang, Chengwen Liu, Zhifeng Jing, Juhoon Lee, Matthew Harger, Ally K. Smith, Miguel Espinoza, Hou-Fu Guo, Jonathan M. Kurie, Kevin N. Dalby, Pengyu Ren, G. Andrés Cisneros
Publikováno v:
Journal of Chemical Information and Modeling. 63:986-1001
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::111cdbad2c351c9152b19292d2a77052
https://doi.org/10.1021/acs.jcim.2c01448
https://doi.org/10.1021/acs.jcim.2c01448
Autor:
Zhifeng Jing, Pengyu Ren
Publikováno v:
The Journal of Physical Chemistry B. 126:7343-7353
Protein-RNA interactions are integral to the biological functions of RNA. It is well recognized that molecular dynamics (MD) simulations of protein-RNA complexes are more challenging than those of each component. The difficulty arises from the strong
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::3aabe6a1aa37b0dc7344bc4908eb786e
https://doi.org/10.1021/acs.jpcb.2c05278
https://doi.org/10.1021/acs.jpcb.2c05278
Autor:
Juhoon Lee, Hou-fu Guo, Yazdan Maghsoud, Erik Antonio Vázquez-Montelongo, Zhifeng Jing, Shike Wang, Rachel M. Sammons, Eun Jeong Cho, Pengyu Ren, G. Andrés Cisneros, Jonathan M. Kurie, Kevin N. Dalby
Lysyl hydroxylase 2 (LH2), an Fe(II) and α-ketoglutarate (αKG, also called 2-oxoglutarate, or 2OG)-dependent oxygenase, is an endoplasmic reticulum-resident enzyme that hydroxylates telopeptidyl lysine residues on fibrillar collagen molecules. It l
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::bdb3db43d1a39dab985a8687275ef515
https://doi.org/10.26434/chemrxiv-2022-t2c5c
https://doi.org/10.26434/chemrxiv-2022-t2c5c
Autor:
Yazdan Maghsoud, Erik Antonio Vázquez-Montelongo, Xudong Yang, Chengwen Liu, Zhifeng Jing, Juhoon Lee, Matthew Harger, Ally K. Smith, Miguel Espinoza, Hou-Fu Guo, Jonathan M. Kurie, Kevin N. Dalby, Pengyu Ren, G. Andrés Cisneros
The catalytic function of Lysyl hydroxylase-2 (LH2), a member of the Fe(II)/αKG-dependent oxygenase superfamily, is to catalyze the hydroxylation of lysine to hydroxylysine in collagen, resulting in stable hydroxylysine aldehyde-derived collagen cro
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::7229f79adfc1070eb454c46e04c5b1bb
https://doi.org/10.26434/chemrxiv-2022-dszd3
https://doi.org/10.26434/chemrxiv-2022-dszd3
Publikováno v:
J Chem Inf Model
Ions play important roles in the structures and functions of biomolecules. In biomolecular simulations, ions either directly interact with biomolecules or provide an ionic environment that influences electrostatic interactions of solutes. The AMOEBA+
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::417e51fce61e5ce2f22ef24f3ced2246
https://doi.org/10.1021/acs.jcim.1c00426
https://doi.org/10.1021/acs.jcim.1c00426
Publikováno v:
Chemical Science
Potassium channels modulate various cellular functions through efficient and selective conduction of K+ ions. The mechanism of ion conduction in potassium channels has recently emerged as a topic of debate. Crystal structures of potassium channels sh
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::99a5a661f05768a64d4f2ab1fbdfba55
https://doi.org/10.1039/d1sc01887f
https://doi.org/10.1039/d1sc01887f
Autor:
Léa El Khoury, Zhifeng Jing, Alberto Cuzzolin, Alessandro Deplano, Daniele Loco, Boris Sattarov, Florent Hédin, Sebastian Wendeborn, Chris Ho, Dina El Ahdab, Theo Jaffrelot Inizan, Mattia Sturlese, Alice Sosic, Martina Volpiana, Angela Lugato, Marco Barone, Barbara Gatto, Maria Ludovica Macchia, Massimo Bellanda, Roberto Battistutta, Cristiano Salata, Ivan Kondratov, Rustam Iminov, Andrii Khairulin, Yaroslav Mykhalonok, Anton Pochepko, Volodymyr Chashka-Ratushnyi, Iaroslava Kos, Stefano Moro, Matthieu Montes, Pengyu Ren, Jay W. Ponder, Louis Lagardère, Jean-Philip Piquemal, Davide Sabbadin
Publikováno v:
Chemical Science
Chemical Science, 2022, ⟨10.1039/D1SC05892D⟩
Chemical Science, 2022, ⟨10.1039/D1SC05892D⟩
We report a fast-track computationally-driven discovery of new SARS-CoV2 Main Protease (Mpro) inhibitors whose potency range from mM for initial non-covalent ligands to high nM for the final covalent compound (IC50=830 +/- 50 nM). The project extensi
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::a7fb3c770ad5b156560e839423dea37d
https://hal.science/hal-03361062
https://hal.science/hal-03361062
Autor:
Léa, El Khoury, Zhifeng, Jing, Alberto, Cuzzolin, Alessandro, Deplano, Daniele, Loco, Boris, Sattarov, Florent, Hédin, Sebastian, Wendeborn, Chris, Ho, Dina, El Ahdab, Theo, Jaffrelot Inizan, Mattia, Sturlese, Alice, Sosic, Martina, Volpiana, Angela, Lugato, Marco, Barone, Barbara, Gatto, Maria Ludovica, Macchia, Massimo, Bellanda, Roberto, Battistutta, Cristiano, Salata, Ivan, Kondratov, Rustam, Iminov, Andrii, Khairulin, Yaroslav, Mykhalonok, Anton, Pochepko, Volodymyr, Chashka-Ratushnyi, Iaroslava, Kos, Stefano, Moro, Matthieu, Montes, Pengyu, Ren, Jay W, Ponder, Louis, Lagardère, Jean-Philip, Piquemal, Davide, Sabbadin
Publikováno v:
Chemical science. 13(13)
We report a fast-track computationally driven discovery of new SARS-CoV-2 main protease (M
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=pmid________::09aa3a22bcf963a31ded78c4b6b5bf9a
https://pubmed.ncbi.nlm.nih.gov/35432906
https://pubmed.ncbi.nlm.nih.gov/35432906