MtSSPdb: The Medicago truncatula Small Secreted Peptide Database

Autor: Michael K. Udvardi, Wolf-Rüdiger Scheible, Xinbin Dai, Ivone Torres-Jerez, Patrick X. Zhao, Peter K. Lundquist, Thomas C. de Bang, Clarissa Boschiero, Zhaohong Zhuang, Shulan Zhang, Sonali Roy

Publikováno v: Boschiero, C, Dai, X, Lundquist, P K, Roy, S, Christian De Bang, T, Zhang, S, Zhuang, Z, Torres-jerez, I, Udvardi, M K, Scheible, W & Zhao, P X 2020, ' MtSSPdb : The Medicago truncatula Small Secreted Peptide Database ', Plant Physiology, vol. 183, no. 1, pp. 399-413 . https://doi.org/10.1104/pp.19.01088

A growing number of small secreted peptides (SSPs) in plants are recognized as important regulatory molecules with roles in processes such as growth, development, reproduction, stress tolerance, and pathogen defense. Recent discoveries further implic

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::7f8d0c28f30e18928246f359a840f669
https://doi.org/10.1104/pp.19.01088

Draft Genome Sequence Resource of Switchgrass Rust Pathogen, Puccinia novopanici Isolate Ard-01

Autor: Zhaohong Zhuang, Xinbin Dai, Raja Sekhar Nandety, Kirankumar S. Mysore, Patrick X. Zhao, Nick Krom, Upinder S. Gill, Yuhong Tang

Publikováno v: Phytopathology®. 109:1513-1515

Puccinia novopanici is an important biotrophic fungal pathogen that causes rust disease in switchgrass. Lack of genomic resources for P. novopanici has hampered the progress toward developing effective disease resistance against this pathogen. Theref

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_________::ad86f62ddf2f76ca495e0a3bbb2c8a94
https://doi.org/10.1094/phyto-04-19-0118-a

Genome-Wide Identification of Medicago Peptides Involved in Macronutrient Responses and Nodulation

Autor: Ivone Torres-Jerez, Wolf-Rüdiger Scheible, Pooja Pant, Clarissa Boschiero, Thomas C. de Bang, Sonali Roy, Joaquina Nogales, Rebecca Dickstein, Michael K. Udvardi, Xinbin Dai, Peter K. Lundquist, Vijaykumar Veerappan, Zhaohong Zhuang, Patrick X. Zhao

Publikováno v: de Bang, T C, Lundquist, P K, Dai, X, Boschiero, C, Zhuang, Z, Pant, P, Torres-Jerez, I, Roy, S, Nogales, J, Veerappan, V, Dickstein, R, Udvardi, M K, Zhao, P X & Scheible, W-R 2017, ' Genome-wide identification of Medicago peptides involved in macronutrient responses and nodulation ', Plant Physiology, vol. 175, no. 4, pp. 1669-1689 . https://doi.org/10.1104/pp.17.01096

Growing evidence indicates that small, secreted peptides (SSPs) play critical roles in legume growth and development, yet the annotation of SSP-coding genes is far from complete. Systematic reannotation of the Medicago truncatula genome identified 1,

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::46338e9cfd8061c946c8b8b14be463e2
https://doi.org/10.1104/pp.17.01096

LegumeIP 2.0—a platform for the study of gene function and genome evolution in legumes

Autor: Zhaohong Zhuang, Patrick X. Zhao, Jun Li, Xinbin Dai

Publikováno v: Nucleic Acids Research

The LegumeIP 2.0 database hosts large-scale genomics and transcriptomics data and provides integrative bioinformatics tools for the study of gene function and evolution in legumes. Our recent updates in LegumeIP 2.0 include gene and protein sequences

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::de35b796ee685afc8b2a45a7e9273c50
http://europepmc.org/articles/PMC4702875

Computational analysis of miRNA targets in plants: current status and challenges.

Autor: Xinbin Dai¹, Zhaohong Zhuang², Zhao, Patrick Xuechun³ pzhao@noble.org

Publikováno v: Briefings in Bioinformatics. Mar2011, Vol. 12 Issue 2, p115-121. 7p. 1 Diagram, 1 Chart.