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Additional file 1 of DeepEdit: single-molecule detection and phasing of A-to-I RNA editing events using nanopore direct RNA sequencing

Autor: Chen, Longxian, Ou, Liang, Jing, Xinyun, Kong, Yimeng, Xie, Bingran, Zhang, Niubing, Shi, Han, Qin, Hang, Li, Xuan, Hao, Pei

Additional file 1: Fig. S1. Implementation of hADAR2 editing system in S. pombe. Fig. S2. Confirmation of candidate A-to-I RNA editing sites by sanger sequencing. Fig. S3. Base-calling errors can be used to identify I-type reads in direct Nanopore re

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::13ff46a6c8223c7694506962e5c86939

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Creating a bacterium that forms eukaryotic nucleosome core particles.

Autor: Jing X; Key Laboratory of Synthetic Biology, Key Laboratory of Plant Design, CAS Center for Excellence in Molecular Plant Sciences, Chinese Academy of Sciences, Shanghai, China., Zhang N; Key Laboratory of Synthetic Biology, Key Laboratory of Plant Design, CAS Center for Excellence in Molecular Plant Sciences, Chinese Academy of Sciences, Shanghai, China.; State Key Laboratory of Bioreactor Engineering, East China University of Science and Technology, Shanghai, China., Zhou X; Key Laboratory of Synthetic Biology, Key Laboratory of Plant Design, CAS Center for Excellence in Molecular Plant Sciences, Chinese Academy of Sciences, Shanghai, China.; University of Chinese Academy of Sciences, Beijing, China., Chen P; Key Laboratory of Synthetic Biology, Key Laboratory of Plant Design, CAS Center for Excellence in Molecular Plant Sciences, Chinese Academy of Sciences, Shanghai, China.; Key Laboratory of Molecular Virology and Immunology, Shanghai Institute of Immunity and Infection, Chinese Academy of Sciences, Shanghai, China., Gong J; Key Laboratory of Synthetic Biology, Key Laboratory of Plant Design, CAS Center for Excellence in Molecular Plant Sciences, Chinese Academy of Sciences, Shanghai, China.; University of Chinese Academy of Sciences, Beijing, China., Zhang K; Key Laboratory of Synthetic Biology, Key Laboratory of Plant Design, CAS Center for Excellence in Molecular Plant Sciences, Chinese Academy of Sciences, Shanghai, China.; State Key Laboratory of Bioreactor Engineering, East China University of Science and Technology, Shanghai, China.; University of Chinese Academy of Sciences, Beijing, China., Wu X; Key Laboratory of Synthetic Biology, Key Laboratory of Plant Design, CAS Center for Excellence in Molecular Plant Sciences, Chinese Academy of Sciences, Shanghai, China., Cai W; Core Facility Center, CAS Center for Excellence in Molecular Plant Sciences, Chinese Academy of Sciences, Shanghai, China., Ye BC; State Key Laboratory of Bioreactor Engineering, East China University of Science and Technology, Shanghai, China., Hao P; University of Chinese Academy of Sciences, Beijing, China.; Key Laboratory of Molecular Virology and Immunology, Shanghai Institute of Immunity and Infection, Chinese Academy of Sciences, Shanghai, China., Zhao GP; Key Laboratory of Synthetic Biology, Key Laboratory of Plant Design, CAS Center for Excellence in Molecular Plant Sciences, Chinese Academy of Sciences, Shanghai, China.; CAS Key Laboratory of Quantitative Engineering Biology, Shenzhen Institute of Synthetic Biology, Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences, Shenzhen, China.; Key Laboratory of Systems Health Science of Zhejiang Province, School of Life Science, Hangzhou Institute for Advanced Study, University of Chinese Academy of Sciences, Hangzhou, China., Yang S; Key Laboratory of Synthetic Biology, Key Laboratory of Plant Design, CAS Center for Excellence in Molecular Plant Sciences, Chinese Academy of Sciences, Shanghai, China.; University of Chinese Academy of Sciences, Beijing, China., Li X; Key Laboratory of Synthetic Biology, Key Laboratory of Plant Design, CAS Center for Excellence in Molecular Plant Sciences, Chinese Academy of Sciences, Shanghai, China. lixuan@sippe.ac.cn.; University of Chinese Academy of Sciences, Beijing, China. lixuan@sippe.ac.cn.

Publikováno v: Nature communications [Nat Commun] 2024 Sep 27; Vol. 15 (1), pp. 8283. Date of Electronic Publication: 2024 Sep 27.