Data Exploration Toolkit for serial diffraction experiments

Autor: Zeldin, OB, Brewster, AS, Hattne, J, Uervirojnangkoorn, M, Lyubimov, AY, Zhou, Q, Zhao, M, Weis, WI, Sauter, NK, Brunger, AT

Publikováno v: Acta crystallographica. Section D, Biological crystallography, vol 71, iss Pt 2
Zeldin, OB; Brewster, AS; Hattne, J; Uervirojnangkoorn, M; Lyubimov, AY; Zhou, Q; et al.(2015). Data Exploration Toolkit for serial diffraction experiments. Acta Crystallographica Section D: Biological Crystallography, 71, 352-356. doi: 10.1107/S1399004714025875. Lawrence Berkeley National Laboratory: Retrieved from: http://www.escholarship.org/uc/item/7053d2b0

© 2015. Ultrafast diffraction at X-ray free-electron lasers (XFELs) has the potential to yield new insights into important biological systems that produce radiation-sensitive crystals. An unavoidable feature of the 'diffraction before destruction' n

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=dedup_wf_001::d8a6624839f1d31240427758895f057a
https://escholarship.org/uc/item/7053d2b0

Advances in X-ray free electron laser (XFEL) diffraction data processing applied to the crystal structure of the synaptotagmin-1 / SNARE complex.

Autor: Lyubimov AY; Department of Molecular and Cellular Physiology, Stanford University, Stanford, United States.; Neurology and Neurological Science, Stanford University, Stanford, United States.; Structural Biology, Stanford University, Stanford, United States.; Photon Science, Stanford University, Stanford, United States.; Howard Hughes Medical Institute, Stanford University, Stanford, United States., Uervirojnangkoorn M; Department of Molecular and Cellular Physiology, Stanford University, Stanford, United States.; Neurology and Neurological Science, Stanford University, Stanford, United States.; Photon Science, Stanford University, Stanford, United States.; Structural Biology, Stanford University, Stanford, United States.; Howard Hughes Medical Institute, Stanford University, Stanford, United States., Zeldin OB; Department of Molecular and Cellular Physiology, Stanford University, Stanford, United States.; Neurology and Neurological Science, Stanford University, Stanford, United States.; Photon Science, Stanford University, Stanford, United States.; Structural Biology, Stanford University, Stanford, United States.; Howard Hughes Medical Institute, Stanford University, Stanford, United States., Zhou Q; Department of Molecular and Cellular Physiology, Stanford University, Stanford, United States.; Neurology and Neurological Science, Stanford University, Stanford, United States.; Photon Science, Stanford University, Stanford, United States.; Structural Biology, Stanford University, Stanford, United States.; Howard Hughes Medical Institute, Stanford University, Stanford, United States., Zhao M; Department of Molecular and Cellular Physiology, Stanford University, Stanford, United States.; Neurology and Neurological Science, Stanford University, Stanford, United States.; Photon Science, Stanford University, Stanford, United States.; Structural Biology, Stanford University, Stanford, United States.; Howard Hughes Medical Institute, Stanford University, Stanford, United States., Brewster AS; Molecular Biophysics and Integrated Bioimaging Division, Lawrence Berkeley National Laboratory, Berkeley, United States., Michels-Clark T; Molecular Biophysics and Integrated Bioimaging Division, Lawrence Berkeley National Laboratory, Berkeley, United States., Holton JM; Molecular Biophysics and Integrated Bioimaging Division, Lawrence Berkeley National Laboratory, Berkeley, United States.; Stanford Synchrotron Radiation Lightsource, SLAC National Accelerator Laboratory, Menlo Park, United States.; Department of Biochemistry and Biophysics, University of California, San Francisco, San Francisco, United States., Sauter NK; Molecular Biophysics and Integrated Bioimaging Division, Lawrence Berkeley National Laboratory, Berkeley, United States., Weis WI; Department of Molecular and Cellular Physiology, Stanford University, Stanford, United States.; Structural Biology, Stanford University, Stanford, United States.; Photon Science, Stanford University, Stanford, United States., Brunger AT; Department of Molecular and Cellular Physiology, Stanford University, Stanford, United States.; Neurology and Neurological Science, Stanford University, Stanford, United States.; Photon Science, Stanford University, Stanford, United States.; Structural Biology, Stanford University, Stanford, United States.; Howard Hughes Medical Institute, Stanford University, Stanford, United States.

Publikováno v: ELife [Elife] 2016 Oct 12; Vol. 5. Date of Electronic Publication: 2016 Oct 12.

Architecture of the synaptotagmin-SNARE machinery for neuronal exocytosis.

Autor: Zhou Q; Department of Molecular and Cellular Physiology, Howard Hughes Medical Institute, Stanford University, Stanford, California 94305, USA.; Departments of Neurology and Neurological Sciences, Photon Science, and Structural Biology, Stanford University, Stanford, California 94305, USA., Lai Y; Department of Molecular and Cellular Physiology, Howard Hughes Medical Institute, Stanford University, Stanford, California 94305, USA.; Departments of Neurology and Neurological Sciences, Photon Science, and Structural Biology, Stanford University, Stanford, California 94305, USA., Bacaj T; Department of Molecular and Cellular Physiology, Howard Hughes Medical Institute, Stanford University, Stanford, California 94305, USA., Zhao M; Department of Molecular and Cellular Physiology, Howard Hughes Medical Institute, Stanford University, Stanford, California 94305, USA.; Departments of Neurology and Neurological Sciences, Photon Science, and Structural Biology, Stanford University, Stanford, California 94305, USA., Lyubimov AY; Department of Molecular and Cellular Physiology, Howard Hughes Medical Institute, Stanford University, Stanford, California 94305, USA.; Departments of Neurology and Neurological Sciences, Photon Science, and Structural Biology, Stanford University, Stanford, California 94305, USA., Uervirojnangkoorn M; Department of Molecular and Cellular Physiology, Howard Hughes Medical Institute, Stanford University, Stanford, California 94305, USA.; Departments of Neurology and Neurological Sciences, Photon Science, and Structural Biology, Stanford University, Stanford, California 94305, USA., Zeldin OB; Department of Molecular and Cellular Physiology, Howard Hughes Medical Institute, Stanford University, Stanford, California 94305, USA.; Departments of Neurology and Neurological Sciences, Photon Science, and Structural Biology, Stanford University, Stanford, California 94305, USA., Brewster AS; Physical Biosciences Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, USA., Sauter NK; Physical Biosciences Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, USA., Cohen AE; SLAC National Accelerator Laboratory, Stanford, California 94305, USA., Soltis SM; SLAC National Accelerator Laboratory, Stanford, California 94305, USA., Alonso-Mori R; SLAC National Accelerator Laboratory, Stanford, California 94305, USA., Chollet M; SLAC National Accelerator Laboratory, Stanford, California 94305, USA., Lemke HT; SLAC National Accelerator Laboratory, Stanford, California 94305, USA., Pfuetzner RA; Department of Molecular and Cellular Physiology, Howard Hughes Medical Institute, Stanford University, Stanford, California 94305, USA.; Departments of Neurology and Neurological Sciences, Photon Science, and Structural Biology, Stanford University, Stanford, California 94305, USA., Choi UB; Department of Molecular and Cellular Physiology, Howard Hughes Medical Institute, Stanford University, Stanford, California 94305, USA.; Departments of Neurology and Neurological Sciences, Photon Science, and Structural Biology, Stanford University, Stanford, California 94305, USA., Weis WI; Departments of Structural Biology, Molecular and Cellular Physiology, and Photon Science, Stanford University, Stanford, California 94305, USA., Diao J; Department of Molecular and Cellular Physiology, Howard Hughes Medical Institute, Stanford University, Stanford, California 94305, USA.; Departments of Neurology and Neurological Sciences, Photon Science, and Structural Biology, Stanford University, Stanford, California 94305, USA., Südhof TC; Department of Molecular and Cellular Physiology, Howard Hughes Medical Institute, Stanford University, Stanford, California 94305, USA., Brunger AT; Department of Molecular and Cellular Physiology, Howard Hughes Medical Institute, Stanford University, Stanford, California 94305, USA.; Departments of Neurology and Neurological Sciences, Photon Science, and Structural Biology, Stanford University, Stanford, California 94305, USA.

Publikováno v: Nature [Nature] 2015 Sep 03; Vol. 525 (7567), pp. 62-7. Date of Electronic Publication: 2015 Aug 17.

Enabling X-ray free electron laser crystallography for challenging biological systems from a limited number of crystals.

Autor: Uervirojnangkoorn M; Department of Molecular and Cellular Physiology, Stanford University, Stanford, United States., Zeldin OB; Department of Molecular and Cellular Physiology, Stanford University, Stanford, United States., Lyubimov AY; Department of Molecular and Cellular Physiology, Stanford University, Stanford, United States., Hattne J; Janelia Research Campus, Ashburn, United States., Brewster AS; Physical Biosciences Division, Lawrence Berkeley National Laboratory, Berkeley, United States., Sauter NK; Physical Biosciences Division, Lawrence Berkeley National Laboratory, Berkeley, United States., Brunger AT; Department of Molecular and Cellular Physiology, Stanford University, Stanford, United States., Weis WI; Department of Molecular and Cellular Physiology, Stanford University, Stanford, United States.

Publikováno v: ELife [Elife] 2015 Mar 17; Vol. 4. Date of Electronic Publication: 2015 Mar 17.

Goniometer-based femtosecond crystallography with X-ray free electron lasers.

Autor: Cohen AE; Stanford Synchrotron Radiation Lightsource, HodgsonK@stanford.edu acohen@slac.stanford.edu., Soltis SM; Stanford Synchrotron Radiation Lightsource., González A; Stanford Synchrotron Radiation Lightsource., Aguila L; Stanford Synchrotron Radiation Lightsource., Alonso-Mori R; Linac Coherent Light Source, and., Barnes CO; Department of Structural Biology, University of Pittsburgh School of Medicine, Pittsburgh, PA 15261;, Baxter EL; Stanford Synchrotron Radiation Lightsource, Departments of Chemistry., Brehmer W; Stanford Synchrotron Radiation Lightsource., Brewster AS; Physical Biosciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94720;, Brunger AT; Molecular and Cellular Physiology, and Howard Hughes Medical Institute, Stanford University, Stanford, CA 94305;, Calero G; Department of Structural Biology, University of Pittsburgh School of Medicine, Pittsburgh, PA 15261;, Chang JF; Stanford Synchrotron Radiation Lightsource., Chollet M; Linac Coherent Light Source, and., Ehrensberger P; Stanford Synchrotron Radiation Lightsource., Eriksson TL; Stanford Synchrotron Radiation Lightsource., Feng Y; Linac Coherent Light Source, and., Hattne J; Physical Biosciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94720;, Hedman B; Stanford Synchrotron Radiation Lightsource., Hollenbeck M; Stanford Synchrotron Radiation Lightsource., Holton JM; Physical Biosciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94720; Department of Biochemistry and Biophysics, University of California, San Francisco, CA 94158; and., Keable S; Department of Chemistry and Biochemistry, Montana State University, Bozeman, MT 59715., Kobilka BK; Molecular and Cellular Physiology, and., Kovaleva EG; Stanford Synchrotron Radiation Lightsource., Kruse AC; Molecular and Cellular Physiology, and., Lemke HT; Linac Coherent Light Source, and., Lin G; Department of Structural Biology, University of Pittsburgh School of Medicine, Pittsburgh, PA 15261;, Lyubimov AY; Molecular and Cellular Physiology, and Howard Hughes Medical Institute, Stanford University, Stanford, CA 94305;, Manglik A; Molecular and Cellular Physiology, and., Mathews II; Stanford Synchrotron Radiation Lightsource., McPhillips SE; Stanford Synchrotron Radiation Lightsource., Nelson S; Linac Coherent Light Source, and., Peters JW; Department of Chemistry and Biochemistry, Montana State University, Bozeman, MT 59715., Sauter NK; Physical Biosciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94720;, Smith CA; Stanford Synchrotron Radiation Lightsource., Song J; Stanford Synchrotron Radiation Lightsource., Stevenson HP; Department of Structural Biology, University of Pittsburgh School of Medicine, Pittsburgh, PA 15261;, Tsai Y; Stanford Synchrotron Radiation Lightsource, Departments of Chemistry., Uervirojnangkoorn M; Molecular and Cellular Physiology, and Howard Hughes Medical Institute, Stanford University, Stanford, CA 94305;, Vinetsky V; Stanford Synchrotron Radiation Lightsource., Wakatsuki S; Photon Science, SLAC National Accelerator Laboratory, Stanford University, Menlo Park, CA 94025; Structural Biology, and., Weis WI; Molecular and Cellular Physiology, and Structural Biology, and., Zadvornyy OA; Department of Chemistry and Biochemistry, Montana State University, Bozeman, MT 59715., Zeldin OB; Molecular and Cellular Physiology, and Howard Hughes Medical Institute, Stanford University, Stanford, CA 94305;, Zhu D; Linac Coherent Light Source, and., Hodgson KO; Stanford Synchrotron Radiation Lightsource, Departments of Chemistry, HodgsonK@stanford.edu acohen@slac.stanford.edu.

Publikováno v: Proceedings of the National Academy of Sciences of the United States of America [Proc Natl Acad Sci U S A] 2014 Dec 02; Vol. 111 (48), pp. 17122-7. Date of Electronic Publication: 2014 Oct 31.