Zobrazeno 1 - 10
of 34
pro vyhledávání: '"Zarina S, Lalmahomed"'
Autor:
Marcel Smid, Robert R. J. Coebergh van den Braak, Harmen J. G. van de Werken, Job van Riet, Anne van Galen, Vanja de Weerd, Michelle van der Vlugt-Daane, Sandra I. Bril, Zarina S. Lalmahomed, Wigard P. Kloosterman, Saskia M. Wilting, John A. Foekens, Jan N. M. IJzermans, on behalf of the MATCH study group, John W. M. Martens, Anieta M. Sieuwerts
Publikováno v:
BMC Bioinformatics, Vol 19, Iss 1, Pp 1-13 (2018)
Abstract Background Current normalization methods for RNA-sequencing data allow either for intersample comparison to identify differentially expressed (DE) genes or for intrasample comparison for the discovery and validation of gene signatures. Most
Externí odkaz:
https://doaj.org/article/0b7a92e9f436482ca4f434ca1ad429a9
Autor:
Emile E. Voest, Jan N.M. Ijzermans, Marco J. Koudijs, Katharina Biermann, John A. Foekens, John W.M. Martens, Fried Zwartkruis, Armel Lefebvre, Marcel Smid, Anne van Galen, Salo Ooft, Zarina S. Lalmahomed, Ronne Brunekreef, Christina Stangl, Anieta M. Sieuwerts, Markus J. van Roosmalen, Mark Pieterse, Robert R.J. Coebergh van den Braak, Wigard P. Kloosterman
Colon tumor sample overview, clinical characteristics, fusion genes and KRAS, NRAS, BRAF mutation status and sequencing statistics.
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::0f2a256c59c51f564473fc640548b156
https://doi.org/10.1158/0008-5472.22415336.v1
https://doi.org/10.1158/0008-5472.22415336.v1
Autor:
Emile E. Voest, Jan N.M. Ijzermans, Marco J. Koudijs, Katharina Biermann, John A. Foekens, John W.M. Martens, Fried Zwartkruis, Armel Lefebvre, Marcel Smid, Anne van Galen, Salo Ooft, Zarina S. Lalmahomed, Ronne Brunekreef, Christina Stangl, Anieta M. Sieuwerts, Markus J. van Roosmalen, Mark Pieterse, Robert R.J. Coebergh van den Braak, Wigard P. Kloosterman
Genomic rearrangements that give rise to oncogenic gene fusions can offer actionable targets for cancer therapy. Here we present a systematic analysis of oncogenic gene fusions among a clinically well-characterized, prospectively collected set of 278
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::58a923860b81916ef0f93edf4d22c1c9
https://doi.org/10.1158/0008-5472.c.6509240.v1
https://doi.org/10.1158/0008-5472.c.6509240.v1
Supplementary Data file from A Systematic Analysis of Oncogenic Gene Fusions in Primary Colon Cancer
Autor:
Emile E. Voest, Jan N.M. Ijzermans, Marco J. Koudijs, Katharina Biermann, John A. Foekens, John W.M. Martens, Fried Zwartkruis, Armel Lefebvre, Marcel Smid, Anne van Galen, Salo Ooft, Zarina S. Lalmahomed, Ronne Brunekreef, Christina Stangl, Anieta M. Sieuwerts, Markus J. van Roosmalen, Mark Pieterse, Robert R.J. Coebergh van den Braak, Wigard P. Kloosterman
Combined supplementary data file containing: -extended materials and methods, describing details of sample collection and isolation, sequencing data generation, cell culturing and protein analysis. -Supplementary Figure S1 showing patient inclusion i
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::0e167d5f6d01e19f2822c7d205357c4d
https://doi.org/10.1158/0008-5472.22415339.v1
https://doi.org/10.1158/0008-5472.22415339.v1
Autor:
Robert R J Coebergh van den Braak, Anieta M Sieuwerts, Raju Kandimalla, Zarina S Lalmahomed, Sandra I Bril, Anne van Galen, Marcel Smid, Katharina Biermann, J Han J M van Krieken, Wigard P Kloosterman, John A Foekens, Ajay Goel, John W M Martens, Jan N M IJzermans, MATCH study group
Publikováno v:
PLoS ONE, Vol 12, Iss 9, p e0185607 (2017)
Overall and splice specific expression of Spleen Tyrosine Kinase (SYK) has been posed as a marker predicting both poor and favorable outcome in various epithelial malignancies. However, its role in colorectal cancer is largely unknown. The aim of thi
Externí odkaz:
https://doaj.org/article/a097a63dc8464cf5aefb121a394995f8
Autor:
Mirelle E E Bröker, Zarina S Lalmahomed, Henk P Roest, Nick A van Huizen, Lennard J M Dekker, Wim Calame, Cornelis Verhoef, Jan N M Ijzermans, Theo M Luider
Publikováno v:
PLoS ONE, Vol 8, Iss 8, p e70918 (2013)
INTRODUCTION: For both patients and the outpatient clinic the frequent follow-up visits after a resection of colorectal cancer (CRC) are time consuming and due to large patient numbers expensive. Therefore it is important to develop an effective non-
Externí odkaz:
https://doaj.org/article/dbcfcde4056e4d528a634c4c9a12c80b
Autor:
Wietske W. Vrijland, Robert R. J. Coebergh van den Braak, Jan Willem T. Dekker, Jan N. M. IJzermans, Peter-Paul L.O. Coene, Zarina S. Lalmahomed, David D. E. Zimmerman, W. J. Vles, Jeroen L.A. van Vugt
Publikováno v:
European Journal of Surgical Oncology, 44(9), 1354-1360. W.B. Saunders
Background Preoperative low skeletal muscle mass and density are associated with increased postoperative morbidity in patients undergoing curative colorectal cancer (CRC) surgery. However, the long-term effects of low skeletal muscle mass and density
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::f7f566afde4e895e600d5d6ea4cef48e
https://hdl.handle.net/1765/108856
https://hdl.handle.net/1765/108856
Autor:
John W.M. Martens, Marcel Smid, Zarina S. Lalmahomed, Anieta M. Sieuwerts, Christina Stangl, Katharina Biermann, Anne van Galen, Armel Lefebvre, Jan N. M. IJzermans, Salo N. Ooft, Wigard P. Kloosterman, John A. Foekens, Ronne Brunekreef, Robert R. J. Coebergh van den Braak, Mark Pieterse, Emile E. Voest, Marco J. Koudijs, Fried J. T. Zwartkruis, Markus J. van Roosmalen
Publikováno v:
Cancer Research, 77(14), 3814-3822. American Association for Cancer Research Inc.
Genomic rearrangements that give rise to oncogenic gene fusions can offer actionable targets for cancer therapy. Here we present a systematic analysis of oncogenic gene fusions among a clinically well-characterized, prospectively collected set of 278
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::770ab73a8ab1f049ac0baa85768f16d7
https://doi.org/10.1158/0008-5472.can-16-3563
https://doi.org/10.1158/0008-5472.can-16-3563
Autor:
M. H. A. Oomen, Zarina S. Lalmahomed, R. R. J. Coebergh van den Braak, Jan N. M. IJzermans, Peter Riegman, Shazia Arshad
Publikováno v:
Cell and Tissue Banking
Cell and Tissue Banking, 18(3), 425-431. Springer Netherlands
Cell and Tissue Banking, 18(3), 425-431. Springer Netherlands
The growing interest in the molecular subclassification of colorectal cancers is increasingly facilitated by large multicenter biobanking initiatives. The quality of tissue sampling is pivotal for successful translational research. This study shows t
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::a37dd561a3f5db4c9c58e0bfd1e37cee
https://doi.org/10.1007/s10561-017-9613-x
https://doi.org/10.1007/s10561-017-9613-x
Autor:
Robert R. J. Coebergh van den Braak, Zarina S. Lalmahomed, Bettina E. Hansen, Jan N. M. IJzermans, Stefan Büttner
Publikováno v:
Digestive Diseases, 36(1), 17-25. Karger
Background/Aims: The 5-year postoperative follow-up for patients undergoing curative treatment for colorectal cancer (CRC) is labour intensive. We assessed the added value of a dedicated nonphysician clinician (NPC) in the follow-up of patients after
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::523e05eb5077e6fa9390eebbb25f28ee
https://pure.eur.nl/en/publications/d17c8d28-bce7-4a3e-8c82-bd2fb6f46dfe
https://pure.eur.nl/en/publications/d17c8d28-bce7-4a3e-8c82-bd2fb6f46dfe