Zobrazeno 1 - 10
of 13
pro vyhledávání: '"Zaneta Andrusivova"'
Autor:
Sanem Sariyar, Alexandros Sountoulidis, Jan Niklas Hansen, Sergio Marco Salas, Mariya Mardamshina, Anna Martinez Casals, Frederic Ballllosera Navarro, Zaneta Andrusivova, Xiaofei Li, Paulo Czarnewski, Joakim Lundeberg, Sten Linnarsson, Mats Nilsson, Erik Sundström, Christos Samakovlis, Emma Lundberg, Burcu Ayoglu
Publikováno v:
Nature Communications, Vol 15, Iss 1, Pp 1-19 (2024)
Abstract The respiratory system, including the lungs, is essential for terrestrial life. While recent research has advanced our understanding of lung development, much still relies on animal models and transcriptome analyses. In this study conducted
Externí odkaz:
https://doaj.org/article/f96183ed55c1432a879f9774af146d47
Autor:
Yuvarani Masarapu, Egle Cekanaviciute, Zaneta Andrusivova, Jakub O. Westholm, Åsa Björklund, Robin Fallegger, Pau Badia-i-Mompel, Valery Boyko, Shubha Vasisht, Amanda Saravia-Butler, Samrawit Gebre, Enikő Lázár, Marta Graziano, Solène Frapard, Robert G. Hinshaw, Olaf Bergmann, Deanne M. Taylor, Douglas C. Wallace, Christer Sylvén, Konstantinos Meletis, Julio Saez-Rodriguez, Jonathan M. Galazka, Sylvain V. Costes, Stefania Giacomello
Publikováno v:
Nature Communications, Vol 15, Iss 1, Pp 1-14 (2024)
Abstract Impairment of the central nervous system (CNS) poses a significant health risk for astronauts during long-duration space missions. In this study, we employed an innovative approach by integrating single-cell multiomics (transcriptomics and c
Externí odkaz:
https://doaj.org/article/e005e5c2fdd54d54a58a469fc7aa1cbf
Autor:
Reza Mirzazadeh, Zaneta Andrusivova, Ludvig Larsson, Phillip T. Newton, Leire Alonso Galicia, Xesús M. Abalo, Mahtab Avijgan, Linda Kvastad, Alexandre Denadai-Souza, Nathalie Stakenborg, Alexandra B. Firsova, Alia Shamikh, Aleksandra Jurek, Niklas Schultz, Monica Nistér, Christos Samakovlis, Guy Boeckxstaens, Joakim Lundeberg
Publikováno v:
Nature Communications, Vol 14, Iss 1, Pp 1-16 (2023)
Spatial transcriptomics relies on RNA quality, which is variable and dependent on sample handling, storage, and/or intrinsic factors. Here, authors present a genome-wide spatial gene expression profiling method called RNA Rescue Spatial Transcriptomi
Externí odkaz:
https://doaj.org/article/2506fddc5b224664b99b677008788151
Autor:
José Fernández Navarro, Deborah L. Croteau, Aleksandra Jurek, Zaneta Andrusivova, Beimeng Yang, Yue Wang, Benjamin Ogedegbe, Tahira Riaz, Mari Støen, Claus Desler, Lene Juel Rasmussen, Tone Tønjum, Marie-Christine Galas, Joakim Lundeberg, Vilhelm A. Bohr
Publikováno v:
iScience, Vol 23, Iss 10, Pp 101556- (2020)
Summary: Alzheimer disease (AD) is a devastating neurological disease associated with progressive loss of mental skills and cognitive and physical functions whose etiology is not completely understood. Here, our goal was to simultaneously uncover nov
Externí odkaz:
https://doaj.org/article/8d093f5f3f6e43889e1b6be067634ef0
Autor:
Xiaofei Li, Zaneta Andrusivova, Paulo Czarnewski, Christoffer Mattsson Langseth, Alma Andersson, Yang Liu, Daniel Gyllborg, Emelie Braun, Ludvig Larsson, Lijuan Hu, Zhanna Alekseenko, Hower Lee, Christophe Avenel, Helena Kopp Kallner, Elisabet Åkesson, Igor Adameyko, Mats Nilsson, Sten Linnarsson, Joakim Lundeberg, Erik Sundström
Publikováno v:
Nature Neuroscience. 26:891-901
The spatiotemporal regulation of cell fate specification in the human developing spinal cord remains largely unknown. In this study, by performing integrated analysis of single-cell and spatial multi-omics data, we used 16 prenatal human samples to c
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::3b23766a58ea8fb330107437388f1985
https://doi.org/10.1038/s41593-023-01312-9
https://doi.org/10.1038/s41593-023-01312-9
Autor:
Yuvarani Masarapu, Egle Cekanaviciute, Zaneta Andrusivova, Jakub Orzechowski Westholm, Åsa Björklund, Robin Fallegger, Pau Badia-i-Mompel, Valery Boyko, Shubha Vasisht, Amanda Saravia-Butler, Samrawit Gebre, Enikö Lázár, Olaf Bergmann, Deanne Taylor, Douglas Wallace, Christer Sylvén, Julio Saez Rodriguez, Jonathan Galazka, Sylvain Costes, Stefania Giacomello
Impairment of the central nervous system (CNS) functions in astronauts is a major health risk for long-duration space missions. Here, for the first time, we combine single-cell multiomics (transcriptomics and chromatin accessibility) and spatial tran
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::67f890e7ac91f2287d9d35893fcba5bb
https://doi.org/10.21203/rs.3.rs-2865086/v1
https://doi.org/10.21203/rs.3.rs-2865086/v1
Autor:
Reza Mirzazadeh, Zaneta Andrusivova, Ludvig Larsson, Phillip T. Newton, Leire Alonso Galicia, Xesús M. Abalo, Mahtab Avijgan, Linda Kvastad, Alexandre Denadai-Souza, Nathalie Stakenborg, Alexandra B. Firsova, Alia Shamikh, Aleksandra Jurek, Niklas Schultz, Monica Nistér, Christos Samakovlis, Guy Boeckxstaens, Joakim Lundeberg
Spatially resolved transcriptomics has enabled precise genome-wide mRNA expression profiling within tissue sections. The performance of methods targeting the polyA tails of mRNA relies on the availability of specimens with high RNA quality. Moreover,
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::c0ece69f265eb96b7ca9a4f817c0637b
https://doi.org/10.1101/2022.09.13.507728
https://doi.org/10.1101/2022.09.13.507728
Autor:
Xiaofei Li, Zaneta Andrusivova, Paulo Czarnewski, Christoffer Mattsson Langseth, Alma Andersson, Yang Liu, Daniel Gyllborg, Emelie Braun, Ludvig Larsson, Lijuan Hu, Zhanna Alekseenko, Hower Lee, Christophe Avenel, Helena Kopp Kallner, Elisabet Åkesson, Igor Adameyko, Mats Nilsson, Sten Linnarsson, Joakim Lundeberg, Erik Sundström
The human spinal cord contains diverse cell types, governed by a series of spatiotemporal events for tissue assembly and functions. However, the spatiotemporal regulation of cell fate specification in the human developing spinal cord remains largely
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::d6e0075be8c60db7a4475c16083c670e
https://doi.org/10.1101/2022.08.31.505986
https://doi.org/10.1101/2022.08.31.505986
Autor:
Eliah Overbey, Saswati Das, Henry Cope, Pedro Madrigal, Zaneta Andrusivova, Solène Frapard, Rebecca Klotz, Daniela Bezdan, Ryan Scott, Jiwoon Park, Dawn Chirko, Jonathan Matthew Galazka, Sylvain V. Costes, Christopher E. Mason, Raul Herranz, Nathaniel J. Szewczyk, Joseph Borg, Stefania Giacomello
Publikováno v:
SSRN Electronic Journal.
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::cdd0e4649f72b553bc1c4251c1132ff3
https://doi.org/10.2139/ssrn.4066811
https://doi.org/10.2139/ssrn.4066811
Autor:
Eliah G. Overbey, Saswati Das, Henry Cope, Pedro Madrigal, Zaneta Andrusivova, Solène Frapard, Rebecca Klotz, Daniela Bezdan, Anjali Gupta, Ryan T. Scott, Jiwoon Park, Dawn Chirko, Jonathan M. Galazka, Sylvain V. Costes, Christopher E. Mason, Raul Herranz, Nathaniel J. Szewczyk, Joseph Borg, Stefania Giacomello
Publikováno v:
Cell Reports Methods. 2:100325
15 p.-2 fig.-3 tab.
Single-cell RNA sequencing (scRNA-seq) and spatially resolved transcriptomics (SRT) have experienced rapid development in recent years. The findings of spaceflight-based scRNA-seq and SRT investigations are likely to improve
Single-cell RNA sequencing (scRNA-seq) and spatially resolved transcriptomics (SRT) have experienced rapid development in recent years. The findings of spaceflight-based scRNA-seq and SRT investigations are likely to improve
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::a158ebddde06114cfd38546cd933ae1b
https://doi.org/10.1016/j.crmeth.2022.100325
https://doi.org/10.1016/j.crmeth.2022.100325