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Akademický článek

Inference of transcriptional regulation using gene expression data from the bovine and human genomes

Autor: McEwan John C, Zadissa Amonida, Brown Chris M

Publikováno v: BMC Genomics, Vol 8, Iss 1, p 265 (2007)

Abstract Background Gene expression is in part regulated by sequences in promoters that bind transcription factors. Thus, co-expressed genes may have shared sequence motifs representing putative transcription factor binding sites (TFBSs). However, fo

Externí odkaz: https://doaj.org/article/d5f273e7cdbc48f1bef739421cd61f48

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Akademický článek

Establishment of a pipeline to analyse non-synonymous SNPs in Bos taurus

Autor: Schreiber Mark, Morris Chris A, McCulloch Alan F, Dodds Ken G, Cullen Neil G, Manley Tim R, Glass Belinda C, Keane Orla M, Lee Michael A, Warren Jonathan, Zadissa Amonida, Wilson Theresa, McEwan John C

Publikováno v: BMC Genomics, Vol 7, Iss 1, p 298 (2006)

Abstract Background Single nucleotide polymorphisms (SNPs) are an abundant form of genetic variation in the genome of every species and are useful for gene mapping and association studies. Of particular interest are non-synonymous SNPs, which may alt

Externí odkaz: https://doaj.org/article/b9447dd971bb46bfbac25f88739af648

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Akademický článek

Gene expression profiling of Naïve sheep genetically resistant and susceptible to gastrointestinal nematodes

Autor: Hyndman Dianne L, Wilson Theresa, Zadissa Amonida, Keane Orla M, Greer Gordon J, Baird David B, McCulloch Alan F, Crawford Allan M, McEwan John C

Publikováno v: BMC Genomics, Vol 7, Iss 1, p 42 (2006)

Abstract Background Gastrointestinal nematodes constitute a major cause of morbidity and mortality in grazing ruminants. Individual animals or breeds, however, are known to differ in their resistance to infection. Gene expression profiling allows us

Externí odkaz: https://doaj.org/article/ead14a47e12045228bb47448995ade09

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Data Mining, Quality and Management in the Life Sciences

Autor: Amonida, Zadissa, Rolf, Apweiler

Publikováno v: Methods in molecular biology (Clifton, N.J.). 2449

With the evermore emphasis put on open science and its invaluable benefits to the scientific community, it is no longer the case where a research project simply ends with a scientific publication. The benefits of data sharing and reproducibility of r

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=pmid________::fa08cb299dcd689291d0c194e9640a83
https://pubmed.ncbi.nlm.nih.gov/35507257

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Data Mining, Quality and Management in the Life Sciences

Autor: Amonida Zadissa, Rolf Apweiler

Publikováno v: Methods in Molecular Biology ISBN: 9781071620946

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_________::81743332cd51434da475d80d1f4df25a
https://doi.org/10.1007/978-1-0716-2095-3_1

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Akademický článek

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ELIXIR-CONVERGE D8.1 Access to EU tools and project data

Autor: Cochrane, Guy, Rajan, Jeena, Zadissa, Amonida

Rich and integrated biomolecular data are essential to support the world's scientific research into COVID-19. These data underlie our biological understanding (viral biology, the infection processes and patient response), our ability to identify and

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::64a8676af9074ae816733b8ec1c059dd

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Ensembl 2019

Autor: Fiona Cunningham, Premanand Achuthan, Wasiu Akanni, James Allen, M Ridwan Amode, Irina M Armean, Ruth Bennett, Jyothish Bhai, Konstantinos Billis, Sanjay Boddu, Carla Cummins, Claire Davidson, Kamalkumar Jayantilal Dodiya, Astrid Gall, Carlos García Girón, Laurent Gil, Tiago Grego, Leanne Haggerty, Erin Haskell, Thibaut Hourlier, Osagie G Izuogu, Sophie H Janacek, Thomas Juettemann, Mike Kay, Matthew R Laird, Ilias Lavidas, Zhicheng Liu, Jane E Loveland, José C Marugán, Thomas Maurel, Aoife C McMahon, Benjamin Moore, Joannella Morales, Jonathan M Mudge, Michael Nuhn, Denye Ogeh, Anne Parker, Andrew Parton, Mateus Patricio, Ahamed Imran Abdul Salam, Bianca M Schmitt, Helen Schuilenburg, Dan Sheppard, Helen Sparrow, Eloise Stapleton, Marek Szuba, Kieron Taylor, Glen Threadgold, Anja Thormann, Alessandro Vullo, Brandon Walts, Andrea Winterbottom, Amonida Zadissa, Marc Chakiachvili, Adam Frankish, Sarah E Hunt, Myrto Kostadima, Nick Langridge, Fergal J Martin, Matthieu Muffato, Emily Perry, Magali Ruffier, Daniel M Staines, Stephen J Trevanion, Bronwen L Aken, Andrew D Yates, Daniel R Zerbino, Paul Flicek

Publikováno v: Nucleic Acids Research

The Ensembl project (https://www.ensembl.org) makes key genomic data sets available to the entire scientific community without restrictions. Ensembl seeks to be a fundamental resource driving scientific progress by creating, maintaining and updating

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::42bb0745f5f44e984bb1f2bbfd9fda58
http://europepmc.org/articles/PMC6323964

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Akademický článek

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