Zobrazeno 1 - 9
of 9
pro vyhledávání: '"Zachary S. Cooper"'
Autor:
Iva Veseli, Michelle A. DeMers, Zachary S. Cooper, Matthew S. Schechter, Samuel Miller, Laura Weber, Christa B. Smith, Lidimarie T. Rodriguez, William F. Schroer, Matthew R. McIlvin, Paloma Z. Lopez, Makoto Saito, Sonya Dyhrman, A. Murat Eren, Mary Ann Moran, Rogier Braakman
Publikováno v:
Scientific Data, Vol 11, Iss 1, Pp 1-13 (2024)
Abstract The remarkable pace of genomic data generation is rapidly transforming our understanding of life at the micron scale. Yet this data stream also creates challenges for team science. A single microbe can have multiple versions of genome archit
Externí odkaz:
https://doaj.org/article/c2521d05ac3b40efa382ccc61cbce7a8
Autor:
Zachary S. Cooper, Josephine Z. Rapp, Anna M. D. Shoemaker, Rika E. Anderson, Zhi-Ping Zhong, Jody W. Deming
Publikováno v:
Frontiers in Microbiology, Vol 13 (2022)
Marinobacter spp. are cosmopolitan in saline environments, displaying a diverse set of metabolisms that allow them to competitively occupy these environments, some of which can be extreme in both salinity and temperature. Here, we introduce a distinc
Externí odkaz:
https://doaj.org/article/e35f17158e0549aa8bf771dcbad38a6a
Autor:
Zhi-Ping Zhong, Josephine Z. Rapp, James M. Wainaina, Natalie E. Solonenko, Heather Maughan, Shelly D. Carpenter, Zachary S. Cooper, Ho Bin Jang, Benjamin Bolduc, Jody W. Deming, Matthew B. Sullivan
Publikováno v:
mSystems, Vol 5, Iss 3 (2020)
ABSTRACT Arctic regions, which are changing rapidly as they warm 2 to 3 times faster than the global average, still retain microbial habitats that serve as natural laboratories for understanding mechanisms of microbial adaptation to extreme condition
Externí odkaz:
https://doaj.org/article/246cd0b3fe5d49579d76e722ea66f853
Publikováno v:
Permafrost and Periglacial Processes. 32:427-446
Autor:
Zachary S, Cooper, Josephine Z, Rapp, Anna M D, Shoemaker, Rika E, Anderson, Zhi-Ping, Zhong, Jody W, Deming
Publikováno v:
Frontiers in microbiology. 13
Cryopeg is a volume of permafrost with a significant amount of cryotic unfrozen water as a result of freezing-point depression by dissolved salt content. Cryopeg and saline permafrost have been reported for coastal areas of the Arctic seas, and their
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::5d449e57c3c1fcdc3e2c1e2e543f94ca
https://doi.org/10.5194/egusphere-egu21-8528
https://doi.org/10.5194/egusphere-egu21-8528
Autor:
Shelly D. Carpenter, Matthew B. Sullivan, Heather Maughan, Jody W. Deming, Josephine Z. Rapp, Natalie Solonenko, Zhi-Ping Zhong, James M. Wainaina, Ho Bin Jang, Benjamin Bolduc, Zachary S. Cooper
Publikováno v:
mSystems, Vol 5, Iss 3, p e00246-20 (2020)
mSystems, Vol 5, Iss 3 (2020)
mSystems
mSystems, Vol 5, Iss 3 (2020)
mSystems
This study explores viral community structure and function in remote and extreme Arctic environments, including subzero brines within marine layers of permafrost and sea ice, using a modern viral ecogenomics toolkit for the first time. In addition to
Autor:
Josephine Z. Rapp, Hajo Eicken, Go Iwahana, Jody W. Deming, Zachary S. Cooper, Shelly D. Carpenter
Publikováno v:
FEMS Microbiology Ecology
Hypersaline aqueous environments at subzero temperatures are known to be inhabited by microorganisms, yet information on community structure in subzero brines is very limited. Near Utqiaġvik, Alaska, we sampled subzero brines (–6°C, 115–140 ppt
Autor:
Uri Neri, Yuri I. Wolf, Simon Roux, Antonio Pedro Camargo, Benjamin Lee, Darius Kazlauskas, I. Min Chen, Natalia Ivanova, Lisa Zeigler Allen, David Paez-Espino, Donald A. Bryant, Devaki Bhaya, Mart Krupovic, Valerian V. Dolja, Nikos C. Kyrpides, Eugene V. Koonin, Uri Gophna, Adrienne B. Narrowe, Alexander J. Probst, Alexander Sczyrba, Annegret Kohler, Armand Séguin, Ashley Shade, Barbara J. Campbell, Björn D. Lindahl, Brandi Kiel Reese, Breanna M. Roque, Chris DeRito, Colin Averill, Daniel Cullen, David A.C. Beck, David A. Walsh, David M. Ward, Dongying Wu, Emiley Eloe-Fadrosh, Eoin L. Brodie, Erica B. Young, Erik A. Lilleskov, Federico J. Castillo, Francis M. Martin, Gary R. LeCleir, Graeme T. Attwood, Hinsby Cadillo-Quiroz, Holly M. Simon, Ian Hewson, Igor V. Grigoriev, James M. Tiedje, Janet K. Jansson, Janey Lee, Jean S. VanderGheynst, Jeff Dangl, Jeff S. Bowman, Jeffrey L. Blanchard, Jennifer L. Bowen, Jiangbing Xu, Jillian F. Banfield, Jody W. Deming, Joel E. Kostka, John M. Gladden, Josephine Z. Rapp, Joshua Sharpe, Katherine D. McMahon, Kathleen K. Treseder, Kay D. Bidle, Kelly C. Wrighton, Kimberlee Thamatrakoln, Klaus Nusslein, Laura K. Meredith, Lucia Ramirez, Marc Buee, Marcel Huntemann, Marina G. Kalyuzhnaya, Mark P. Waldrop, Matthew B. Sullivan, Matthew O. Schrenk, Matthias Hess, Michael A. Vega, Michelle A. O’Malley, Monica Medina, Naomi E. Gilbert, Nathalie Delherbe, Olivia U. Mason, Paul Dijkstra, Peter F. Chuckran, Petr Baldrian, Philippe Constant, Ramunas Stepanauskas, Rebecca A. Daly, Regina Lamendella, Robert J. Gruninger, Robert M. McKay, Samuel Hylander, Sarah L. Lebeis, Sarah P. Esser, Silvia G. Acinas, Steven S. Wilhelm, Steven W. Singer, Susannah S. Tringe, Tanja Woyke, T.B.K. Reddy, Terrence H. Bell, Thomas Mock, Tim McAllister, Vera Thiel, Vincent J. Denef, Wen-Tso Liu, Willm Martens-Habbena, Xiao-Jun Allen Liu, Zachary S. Cooper, Zhong Wang
Publikováno v:
Cell, Cambridge, MA : Cell Press, 2022, vol. 185, iss. 21, p. 4023-4037, e1-e18
Cell
Cell, 2022, 185 (21), pp.4023-4037.e18. ⟨10.1016/j.cell.2022.08.023⟩
Cell
Cell, 2022, 185 (21), pp.4023-4037.e18. ⟨10.1016/j.cell.2022.08.023⟩
International audience; High-throughput RNA sequencing offers broad opportunities to explore the Earth RNA virome. Mining 5,150 diverse metatranscriptomes uncovered >2.5 million RNA virus contigs. Analysis of >330,000 RNA-dependent RNA polymerases (R