Zobrazeno 1 - 10
of 20
pro vyhledávání: '"Zachary R Lewis"'
Autor:
Zachary R Lewis, Casey W Dunn
Publikováno v:
eLife, Vol 7 (2018)
New sequence data from choanoflagellates improves our understanding of the genetic changes that occurred along the branch of the evolutionary tree that gave rise to animals.
Externí odkaz:
https://doaj.org/article/1d6d17ace78449cf8df4df9d9dca45df
Publikováno v:
PLoS ONE, Vol 6, Iss 9, p e24443 (2011)
In vertebrates, the sensory neurons of the epibranchial (EB) ganglia transmit somatosensory signals from the periphery to the CNS. These ganglia are formed during embryogenesis by the convergence and condensation of two distinct populations of precur
Externí odkaz:
https://doaj.org/article/41de40abd5df48c698e8e3ab72bea837
Autor:
Felipe Segato Dezem, Maycon Marção, Bassem Ben-Cheikh, Nadya Nikulina, Ayodele Omotoso, Destiny Burnett, Priscila Coelho, Judith Hurley, Carmen Gomez, Tien Phan-Everson, Giang Ong, Luciano Martelotto, Zachary R. Lewis, Sophia George, Oliver Braubach, Tathiane M. Malta, Jasmine Plummer
Publikováno v:
BMC Genomics, Vol 24, Iss 1, Pp 1-12 (2023)
Abstract Cell annotation is a crucial methodological component to interpreting single cell and spatial omics data. These approaches were developed for single cell analysis but are often biased, manually curated and yet unproven in spatial omics. Here
Externí odkaz:
https://doaj.org/article/b9b9187442f749489a02407b0cc07d3c
Autor:
Shanshan He, Ruchir Bhatt, Carl Brown, Emily A. Brown, Derek L. Buhr, Kan Chantranuvatana, Patrick Danaher, Dwayne Dunaway, Ryan G. Garrison, Gary Geiss, Mark T. Gregory, Margaret L. Hoang, Rustem Khafizov, Emily E. Killingbeck, Dae Kim, Tae Kyung Kim, Youngmi Kim, Andrew Klock, Mithra Korukonda, Alecksandr Kutchma, Zachary R. Lewis, Yan Liang, Jeffrey S. Nelson, Giang T. Ong, Evan P. Perillo, Joseph C. Phan, Tien Phan-Everson, Erin Piazza, Tushar Rane, Zachary Reitz, Michael Rhodes, Alyssa Rosenbloom, David Ross, Hiromi Sato, Aster W. Wardhani, Corey A. Williams-Wietzikoski, Lidan Wu, Joseph M. Beechem
Publikováno v:
Nature Biotechnology. 40:1794-1806
Resolving the spatial distribution of RNA and protein in tissues at subcellular resolution is a challenge in the field of spatial biology. We describe spatial molecular imaging, a system that measures RNAs and proteins in intact biological samples at
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::6ee5f3689cfbb16a84e4f40fd251566f
https://doi.org/10.1038/s41587-022-01483-z
https://doi.org/10.1038/s41587-022-01483-z
Autor:
Felipe Segato Dezem, Maycon Marção, Bassem Ben-Cheikh, Nadya Nikulina, Ayodele Omotoso, Destiny Burnett, Priscila Coelho, Simone Badal, Judith Hurley, Carmen Gomez, Tien Phan-Everson, Giang Ong, Luciano Martelotto, Zachary R. Lewis, Sophia George, Oliver Braubach, Tathiane Malta, Jasmine Plummer
Cell annotation is a crucial methodological component to interpreting single cell and spatial omics data. These approaches are often biased and manually curated. Here we harness an existing stemness model for assessing oncogenic states to transform i
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::c40de996c37d3644b7cc5649a7aafb94
https://doi.org/10.1101/2023.05.04.539461
https://doi.org/10.1101/2023.05.04.539461
Publikováno v:
Plant Physiol
C4 photosynthesis and Crassulacean acid metabolism (CAM) have been considered as largely independent adaptations despite sharing key biochemical modules. Portulaca is a geographically widespread clade of over 100 annual and perennial angiosperm speci
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::f4ba796237e4b85806467024d1c07fec
https://doi.org/10.1093/plphys/kiac116
https://doi.org/10.1093/plphys/kiac116
Publikováno v:
Science advances. 8(33)
One or more members of four living amphibian clades have independently dispensed with pulmonary respiration and lack lungs, but little is known of the developmental basis of lung loss in any taxon. We use morphological, molecular, and experimental ap
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::5d6be13a7fa39d00a7d631ff3df268e7
https://pubmed.ncbi.nlm.nih.gov/35977024
https://pubmed.ncbi.nlm.nih.gov/35977024
Autor:
Zachary R. Lewis, Brian Birditt, Emily Brown, Kan Chantranuvatana, Brian Filanoski, Chris Corless, Tiên Phan-Everson, Gary Geiss, Tyler Hether, Evie Hobbs, Brett Johnson, Taylor Kelley, Charles Lopez, Rhonda Meredith, Anastasiya Olson, Giang Ong, Mithra Korukonda, Erin Piazza, Jason Reeves, Alyssa Rosenbloom, Kiara Siex, Hye Son Yi, Edward Zhao, Joseph M. Beechem, Gordon Mills
Publikováno v:
Cancer Research. 83:5641-5641
The power of spatial biology lies in the integration of multiple scales of information from subcellular to tissue scale. Until recently, spatial analysis of protein biomarkers in tissues was limited to a few markers at a time using traditional IHC co
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::5526266edf25a0f60c7099f849e2615c
https://doi.org/10.1158/1538-7445.am2023-5641
https://doi.org/10.1158/1538-7445.am2023-5641
Autor:
Shanshan He, Ruchir Bhatt, Carl Brown, Emily A. Brown, Derek L. Buhr, Kan Chantranuvatana, Patrick Danaher, Dwayne Dunaway, Ryan G. Garrison, Gary Geiss, Mark T. Gregory, Margaret L. Hoang, Rustem Khafizov, Emily E. Killingbeck, Dae Kim, Tae Kyung Kim, Youngmi Kim, Andrew Klock, Mithra Korukonda, Alecksandr Kutchma, Zachary R. Lewis, Yan Liang, Jeffrey S. Nelson, Giang T. Ong, Evan P. Perillo, Joseph C. Phan, Tien Phan-Everson, Erin Piazza, Tushar Rane, Zachary Reitz, Michael Rhodes, Alyssa Rosenbloom, David Ross, Hiromi Sato, Aster W. Wardhani, Corey A. Williams-Wietzikoski, Lidan Wu, Joseph M. Beechem
The Spatial Molecular Imaging platform (CosMxTM SMI, NanoString Technologies, Seattle, WA) utilizes high-plex in-situ imaging chemistry for both RNA and protein detection. This automated instrument provides 1000’s of plex, at high sensitivity (1 to
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::c63eed1be671eeea583cad189d792534
https://doi.org/10.1101/2021.11.03.467020
https://doi.org/10.1101/2021.11.03.467020
C4photosynthesis and Crassulacean acid metabolism (CAM) have been considered as largely independent adaptations in spite of sharing key biochemical modules.Portulacais a geographically widespread clade of over 100 annual and perennial angiosperm spec
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::ab534625e5dbdb65ffb115b123eb1526
https://doi.org/10.1101/2021.07.07.451465
https://doi.org/10.1101/2021.07.07.451465