One carbon metabolism in SAR11 pelagic marine bacteria.

Autor: Jing Sun, Laura Steindler, J Cameron Thrash, Kimberly H Halsey, Daniel P Smith, Amy E Carter, Zachary C Landry, Stephen J Giovannoni

Publikováno v: PLoS ONE, Vol 6, Iss 8, p e23973 (2011)

The SAR11 Alphaproteobacteria are the most abundant heterotrophs in the oceans and are believed to play a major role in mineralizing marine dissolved organic carbon. Their genomes are among the smallest known for free-living heterotrophic cells, rais

Externí odkaz: https://doaj.org/article/263c57c5be024931b2119ea9832a64b2

Optofluidic Single-Cell Genome Amplification of Sub-micron Bacteria in the Ocean Subsurface

Autor: Zachary C. Landry, Kevin Vergin, Christopher Mannenbach, Stephen Block, Qiao Yang, Paul Blainey, Craig Carlson, Stephen Giovannoni

Publikováno v: Frontiers in Microbiology, Vol 9 (2018)

Optofluidic single-cell genome amplification was used to obtain genome sequences from sub-micron cells collected from the euphotic and mesopelagic zones of the northwestern Sargasso Sea. Plankton cells were visually selected and manually sorted with

Externí odkaz: https://doaj.org/article/7907ce4aed7f4e5bbb8abe3a664ebc6b

A closely-related clade of globally distributed bloom-forming cyanobacteria within the Nostocales

Autor: Giedrius Gasiūnas, Connor B. Driscoll, Timothy W. Davis, Yanbin Yin, Kevin A. Meyer, Timothy G. Otten, Theo W. Dreher, Gregory J. Dick, Susan B. Watson, Huansheng Cao, Albertas Timinskas, Sigitas Šulčius, Zachary C. Landry, Nathan M. Brown

Publikováno v: Harmful algae. 77

In order to better understand the relationships among current Nostocales cyanobacterial blooms, eight genomes were sequenced from cultured isolates or from environmental metagenomes of recent planktonic Nostocales blooms. Phylogenomic analysis of pub

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::df1beda2321b60ca27530f7f9501561d
https://pubmed.ncbi.nlm.nih.gov/30005805

Structural and functional analysis of the finished genome of the recently isolated toxic Anabaena sp. WA102

Autor: Theo W. Dreher, F. Joan Hardy, Jonathan W. Shepardson, Jeffrey T. Morré, Ryan S. Mueller, Zachary C. Landry, Claudia S. Maier, Nathan M. Brown

Publikováno v: BMC Genomics

Background Very few closed genomes of the cyanobacteria that commonly produce toxic blooms in lakes and reservoirs are available, limiting our understanding of the properties of these organisms. A new anatoxin-a-producing member of the Nostocaceae, A

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::d1033c6f48d021ec9ba9c4a8a7066221
https://pubmed.ncbi.nlm.nih.gov/27296936

Prevalent genome streamlining and latitudinal divergence of planktonic bacteria in the surface ocean

Autor: Mary Ann Moran, Ramunas Stepanauskas, Brian P. Thompson, Tanja Woyke, Jody J. Wright, Zachary C. Landry, Nicole J. Poulton, Brandon K. Swan, Niels W. Hanson, Stephen J. Giovannoni, Ben Tupper, Haiwei Luo, Manuel Martinez-Garcia, Patrick Schwientek, Steven J. Hallam, Alexander Sczyrba, Ricardo Cavicchioli, Federico M. Lauro, José M. González, Silvia G. Acinas

Publikováno v: Digital.CSIC. Repositorio Institucional del CSIC
instname
RUA. Repositorio Institucional de la Universidad de Alicante
Universidad de Alicante (UA)

Swan, Brandon K. ... et al.-- 6 pages, 4 figures.-- Data deposition: Whole-genome sequence data for single amplified genomes used for our analyses are available in the Joint Genome Institute’s Integrated Microbial Genome database, http://img.jgi.do

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::3f7bfcb0fbbd09a5aecfb37b86a2d3cd
http://hdl.handle.net/10261/89940