Výsledky vyhledávání - "Yvonne Th. van den Hoogen"

Bulge-out structures in the single-stranded trimer AUA and in the duplex (CUGGUGCGG).(CCGCCCAG). A model-building and NMR study

Autor: Yvonne Th. van den Hoogen, Jacques H. van Boom, Gijs A. van der Marel, Aart A. van Beuzekom, Erik de Vroom, Cornelis Altona

Publikováno v: Nucleic Acids Research. 16:5013-5030

Model-building studies were carried out on the trimer AUA. Bulge-out structures which allow incorporation into a continuous RNA helix were generated and energy-minimized. All geometrical features obtained by previous NMR studies on purine-pyrimidine-

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::48759cf6ec718436157202af185c7a4f
https://doi.org/10.1093/nar/16.11.5013

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Extra thymidine stacks into the d(CTGGTGCGG).d(CCGCCCAG) duplex. An NMR and modelbuilding study

Autor: Aart A. van Beuzekom, Jacques H. van Boom, Gijs A. van der Marel, Hans van den Elst, Cornelis Altona, Yvonne Th. van den Hoogen

Publikováno v: Nucleic Acids Research. 16:2971-2986

NMR and model-building studies were carried out on the duplex d(CTGGTGCGG).d(CCGCCCAG), referred to as (9+8)-mer, which contains an unpaired thymidine residue. Resonances of the base and of several sugar protons of the (9+8)-mer were assigned by mean

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::c8c3d5b9b4ef36b57fe4b073b7b49655
https://doi.org/10.1093/nar/16.7.2971

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Conformational analysis of the dinucleotides 5'-methylphospho-N6-dimethyladenylyl-uridine (mpm62A-U) and 5'methylphospho-uridylyl-N6-dimethyladenosine (mpU-m62A) and of the trinucleotide U-m62A-U. A nuclear magnetic resonance and circular dichroic study

Autor: Cornelis Altona, Peter P. Lankhorst, Arnold J. Hartel, Yvonne Th. van den Hoogen, Jacques H. van Boom, Pieter Gijsman

Publikováno v: European Journal of Biochemistry. 171:143-153

NMR and CD studies were carried out on the dinucleotides 5'-methylphospho-N6-dimethyladenylyl-uridine (mpm62-U) and 5'-methylphospho-uridylyl-N6-dimethyladenosine (mpU-m62A) and on the trinucleotide U-m62A-U. A detailed comparison is given of the con

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::67cad63c79811a3a0e464baca4c48b69
https://doi.org/10.1111/j.1432-1033.1988.tb13770.x

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Conformational analysis of the tetranucleotides m62A-m62A-U-m62A (m62A = N6-dimethyladenosine) and U-m62A-U-m62A and of the hybrid dA-r(U-A). A one- and two-dimensional NMR study

Autor: H. C. P. F. Roelen, Cornelis Altona, Yvonne Th. van den Hoogen, Gijs A. van der Marel, Erik de Vroom, Jacques H. van Boom, Stevin J. Treurniet

Publikováno v: European Journal of Biochemistry. 171:155-162

A 1H-NMR investigation was carried out on the tetranucleotides U-m6(2)A-U-m6(2)A and m6(2)A-m6(2)A-U-m6(2)A (m6(2) = N6-dimethyladenosine) as well as on the hybrid trinucleotide dA-r(U-A). An extensive comparison with m6(2)A-U-m6(2)A and other releva

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::9190d6cf1d541fc9cffd38d0d838a04f
https://doi.org/10.1111/j.1432-1033.1988.tb13771.x

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Influence of uracil on the conformational behaviour of RNA oligonucleotides in solution

Autor: Cornelis Altona, Erik de Vroom, Jacques H. van Boom, Cornelis Erkelens, Yvonne Th. van den Hoogen, Gijs A. van der Marel

Publikováno v: European journal of biochemistry. 173(2)

NMR studies were carried out on some alternating pyrimidine-purine sequences: the single-stranded tetramers CACA and UGUG and the self-complementary octamer CACAUGUG. Assignments, based upon COSY, homonuclear Hartmann-Hahn, and NOESY experiments, are

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::59191fec8da695cd2994387aeed48941
https://pubmed.ncbi.nlm.nih.gov/2452087

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