Zobrazeno 1 - 10
of 17
pro vyhledávání: '"Yuri A. Mirokhin"'
Autor:
Sanford P. Markey, Yuri A. Mirokhin, Yuxue Liang, Stephen E. Stein, C.A. Remoroza, Meghan C. Burke, Pedatsur Neta, Dmitrii V. Tchekhovskoi, Xiaoyu Yang
Publikováno v:
Journal of Proteome Research. 20:4603-4609
Annotating product ion peaks in tandem mass spectra is essential for evaluating spectral quality and validating peptide identification. This task is more complex for glycopeptides and is crucial for the confident determination of glycosylation sites
Autor:
Stephen E. Stein, Yuri A. Mirokhin, C.A. Remoroza, Meghan C. Burke, Yi Liu, Xiaoyu Yang, Dmitrii V. Tchekhovskoi
Publikováno v:
J Proteome Res
A method for representing and comparing distributions of N-linked glycans located at specific sites on proteins is presented. The representation takes the form of a simple mass spectrum for a given peptide sequence, with each peak corresponding to a
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::168b54be7ca611e815108b8ebe0b79e4
https://europepmc.org/articles/PMC9830564/
https://europepmc.org/articles/PMC9830564/
Autor:
Stephen E. Stein, Meghan C. Burke, Yuxue Liang, Dmitrii V. Tchekhovskoi, Yuri A. Mirokhin, Zheng Zhang, Sergey L. Sheetlin, William E. Wallace
Publikováno v:
Journal of Forensic Sciences
Recent reports have demonstrated that genetically variant peptides derived from human hair shaft proteins can be used to differentiate individuals of different biogeographic origins. We report a method involving direct extraction of hair shaft protei
Autor:
Stephen E. Stein, Ramesh Marupaka, Xinjian Yan, Kelly H. Telu, Yuri A. Mirokhin, Yuxue Liang, Yamil Simón-Manso
Publikováno v:
Anal Chem
A large fraction of ions observed in electrospray liquid chromatography–mass spectrometry (LC–ESI-MS) experiments of biological samples remain unidentified. One of the main reasons for this is that spectral libraries of pure compounds fail to acc
Autor:
Ramesh Marupaka, Zvi Kelman, Tallat H. Bukhari, Stephen E. Stein, Nirina R. Andriamaharavo, Renae J. Preston, Yuri A. Mirokhin, Yuxue Liang, Lila Kashi, Yamil Simón-Manso, Kelly H. Telu
Publikováno v:
Biotechnology and Bioengineering
This paper reports the first implementation of a new type of mass spectral library for the analysis of Chinese hamster ovary (CHO) cell metabolites that allows users to quickly identify most compounds in any complex metabolite sample. We also describ
Autor:
Yuri A. Mirokhin, Tytus D. Mak, Sergey L. Sheetlin, C.A. Remoroza, Xiaoyu Yang, Yuxue Liang, Joice V San Andres, Stephen E. Stein, Michael L. Power
Publikováno v:
Analytical chemistry. 92(15)
This study significantly expands both the scope and method of identification for construction of a previously reported tandem mass spectral library of 74 human milk oligosaccharides (HMOs) derived from results of combined LC-MS/MS experiments and com
Autor:
Ramesh Marupaka, William E. Wallace, Qian Dong, Brian T. Cooper, Xinjian Yan, Stephen E. Stein, Sanford P. Markey, Yuri A. Mirokhin
Publikováno v:
Anal Chem
We describe the creation of a mass spectral library of acylcarnitines and conjugated acylcarnitines from the LC-MS/MS analysis of six NIST urine reference materials. To recognize acylcarnitines, we conducted in-depth analyses of fragmentation pattern
Autor:
Qian Dong, Sanford P. Markey, Xinjian Yan, Dmitrii V. Tchekhovskoi, Yuxue Liang, Stephen E. Stein, Tallat H. Bukhari, Yuri A. Mirokhin
Publikováno v:
mAbs
We describe the creation of a mass spectral library composed of all identifiable spectra derived from the tryptic digest of the NISTmAb IgG1κ. The library is a unique reference spectral collection developed from over six million peptide-spectrum mat
Autor:
Stephen E. Stein, Xinjian Yan, Dmitrii V. Tchekhovskoi, Brian T. Cooper, Yamil Simón-Manso, Yuri A. Mirokhin
Publikováno v:
Anal Chem
Metabolomics has a critical need for better tools for mass spectral identification. Common metabolites may be identified by searching libraries of tandem mass spectra, which offers important advantages over other approaches to identification. But tan
Autor:
Stephen E. Stein, Zheng Zhang, Yuxue Liang, Dmitrii V. Tchekovskoi, Yuri A. Mirokhin, Meghan C. Burke
Publikováno v:
Journal of proteome research. 18(9)
We present a method for FDR estimation of mass spectral library search identifications made by a recently developed method for peptide identification, the hybrid search, based on an extension of the target-decoy approach. In addition to estimating co