Zobrazeno 1 - 10
of 43
pro vyhledávání: '"Yuichi Inadomi"'
Autor:
Masao Nagasaki, Yayoi Sekiya, Akihiro Asakura, Ryo Teraoka, Ryoko Otokozawa, Hiroki Hashimoto, Takahisa Kawaguchi, Keiichiro Fukazawa, Yuichi Inadomi, Ken T. Murata, Yasuyuki Ohkawa, Izumi Yamaguchi, Takamichi Mizuhara, Katsushi Tokunaga, Yuji Sekiya, Toshihiro Hanawa, Ryo Yamada, Fumihiko Matsuda
Publikováno v:
Human Genome Variation, Vol 10, Iss 1, Pp 1-9 (2023)
Abstract In the field of genomic medical research, the amount of large-scale information continues to increase due to advances in measurement technologies, such as high-performance sequencing and spatial omics, as well as the progress made in genomic
Externí odkaz:
https://doaj.org/article/9848fea025c949ef844217112591f940
Autor:
Mutsumi Aoyagi, Yuichi Inadomi, Takayuki Umeda, Masatsugu Ueda, Keiichiro Fukazawa, Koji Inoue
Publikováno v:
HPCC/SmartCity/DSS
Presently the power consumption of supercomputer system becomes a critical issue to develop the exascale supercomputer system. On the other hand, the power consumption character of applications is not so considered by the applications developers beca
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::b0ec0d7f4cb19733ca3423aa0c71b904
https://doi.org/10.1109/hpcc/smartcity/dss.2018.00113
https://doi.org/10.1109/hpcc/smartcity/dss.2018.00113
Autor:
Yuta Kakibuka, Toshio Endo, Keiichiro Fukazawa, Satoshi Imamura, Koji Ueno, Katsuki Fujisawa, Yuichi Inadomi, Takatsugu Ono, Yuichiro Yasui, Nozomi Hata, Keitaro Oka, Koji Inoue
Publikováno v:
IEEE BigData
As the power consumption of HPC systems will be a primary constraint for exascale computing, a main objective in HPC communities is recently becoming to maximize power efficiency (i.e., performance per watt) rather than performance. Although programm
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::f6eda58fcc5476de10dc493ceb022f58
https://doi.org/10.1109/bigdata.2016.7840624
https://doi.org/10.1109/bigdata.2016.7840624
Autor:
Hiroaki Honda, Jun Maki, Kazuo Minami, Toshiya Takami, Yuichi Inadomi, Mutsumi Aoyagi, Taizo Kobayashi
Publikováno v:
Journal of Computer Chemistry, Japan. 12:145-155
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::0e6e44402800bdb779e75ab1bfe49e66
https://doi.org/10.2477/jccj.2012-0031
https://doi.org/10.2477/jccj.2012-0031
Autor:
Koji Inoue, Hidetomo Shibamura, Hisashige Ando, Hideki Miwa, Yuji Oinaga, Yuichi Inadomi, Toshiyuki Shimizu, Jun Maki, Tomoya Hirao, Makoto Yoshida, Takayuki Kando, Ikuo Miyoshi, Kazuaki Murakami, Mutsumi Aoyagi, Ryutaro Susukita, Yuichiro Ajima
Publikováno v:
IEICE Transactions on Information and Systems. :2298-2308
In the near future, interconnection networks of massively parallel computer systems will connect more than a hundred thousands of computing nodes. The performance evaluation of the interconnection networks can provide real insights to help the develo
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::8904fea7ffb60dee2d07d775c0c4fa80
https://doi.org/10.1587/transinf.e94.d.2298
https://doi.org/10.1587/transinf.e94.d.2298
Autor:
Toru Yagi, Toshio Watanabe, Hiroto Tadano, Tsutomu Ikegami, Yuichi Inadomi, Takayoshi Ishimoto, Umpei Nagashima, Tetsuya Sakurai, Hiroaki Umeda
Publikováno v:
Journal of Computational Chemistry. 31(No. 13):2381-2388
A parallel Fock matrix construction program for FMO-MO method has been developed with the distributed shared memory model. To construct a large-sized Fock matrix during FMO-MO calculations, a distributed parallel algorithm was designed to make full u
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::1f2a769299cc2b7af0dea483fe0b960a
http://t2r2.star.titech.ac.jp/cgi-bin/publicationinfo.cgi?q_publication_content_number=CTT100768748
http://t2r2.star.titech.ac.jp/cgi-bin/publicationinfo.cgi?q_publication_content_number=CTT100768748
Autor:
Kaori Fukuzawa, Shigenori Tanaka, Tatsuya Nakano, Toshio Watanabe, Umpei Nagashima, Yuichi Inadomi, Hiroaki Umeda
Publikováno v:
Journal of Computational and Theoretical Nanoscience. 6(Number 6):1328-1337
Fragment molecular orbital (FMO) and FMO-MO (MOs of the FMO) calculations with three typical fragmentations were performed for DNA molecules with various lengths up to 40 base pairs (bps) to validate the accuracy of the total energy and the interfrag
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::0e34f22823d112a1be5117f98f0fbe8f
http://t2r2.star.titech.ac.jp/cgi-bin/publicationinfo.cgi?q_publication_content_number=CTT100768749
http://t2r2.star.titech.ac.jp/cgi-bin/publicationinfo.cgi?q_publication_content_number=CTT100768749
Publikováno v:
Journal of Computational Chemistry. 30:826-831
A parallel Fock matrix construction program for a hierarchical network has been developed on the molecular orbital calculation-specific EHPC system. To obtain high parallelization efficiency on the hierarchical network system, a multilevel dynamic lo
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::b3de3a78d08aaf18c3aa90c804f7a869
https://doi.org/10.1002/jcc.21108
https://doi.org/10.1002/jcc.21108
Autor:
Tatsuya Nakano, Shigenori Tanaka, Lennart Nilsson, Toshio Watanabe, Yuichi Inadomi, Umpei Nagashima, Kaori Fukuzawa
Publikováno v:
The Journal of Physical Chemistry B. 111:9621-9627
Molecular orbital calculations of the complex between DNA-ERE (estrogen response element) and ER (estrogen receptor)-DBD (DNA-binding domain) were performed using the fragment molecular orbital (FMO) method, which enables large-scale MO (molecular or
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::51bb4f3a487879ba75f578dbdac30de8
https://doi.org/10.1021/jp071710v
https://doi.org/10.1021/jp071710v
Autor:
Toshio Watanabe, Takayoshi Ishimoto, Tetsuya Sakurai, Yuichi Inadomi, Hiroaki Umeda, Umpei Nagashima
Publikováno v:
Journal of Computer Chemistry, Japan. 6:217-226
フラグメント分子軌道（FMO）法に基づいた大規模系の分子軌道（FMO-MO）計算についての概要と、Lysozyme分子およびモデルDNA分子への適用結果を示す。FMO-MO法は、FMO計算によって得られた
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::3a19ef9413a669e82f3677ff18424fde
https://doi.org/10.2477/jccj.6.217
https://doi.org/10.2477/jccj.6.217