Dependence of paracentric inversion rate on tract length

Autor: Nielsen Rasmus, Durrett Rick, York Thomas L

Publikováno v: BMC Bioinformatics, Vol 8, Iss 1, p 115 (2007)

Abstract Background We develop a Bayesian method based on MCMC for estimating the relative rates of pericentric and paracentric inversions from marker data from two species. The method also allows estimation of the distribution of inversion tract len

Externí odkaz: https://doaj.org/article/b7ec33218cd045a8bf38c2f8488c6541

Genome sequencing and analysis of the model grass Brachypodium distachyon

Autor: Vogel, John P, Garvin, David F, Mockler, Todd C, Schmutz, Jeremy, Rokhsar, Dan, Bevan, Michael W, Barry, Kerrie, Lucas, Susan, Harmon-Smith, Miranda, Lail, Kathleen, Tice, Hope, Schmutz Leader, Jeremy, Grimwood, Jane, McKenzie, Neil, Huo, Naxin, Gu, Yong Q, Lazo, Gerard R, Anderson, Olin D, Vogel Leader, John P, You, Frank M, Luo, Ming-Cheng, Dvorak, Jan, Wright, Jonathan, Febrer, Melanie, Idziak, Dominika, Hasterok, Robert, Lindquist, Erika, Wang, Mei, Fox, Samuel E, Priest, Henry D, Filichkin, Sergei A, Givan, Scott A, Bryant, Douglas W, Chang, Jeff H, Mockler Leader, Todd C, Wu, Haiyan, Wu, Wei, Hsia, An-Ping, Schnable, Patrick S, Kalyanaraman, Anantharaman, Barbazuk, Brad, Michael, Todd P, Hazen, Samuel P, Bragg, Jennifer N, Laudencia-Chingcuanco, Debbie, Weng, Yiqun, Haberer, Georg, Spannagl, Manuel, Mayer Leader, Klaus, Rattei, Thomas, Mitros, Therese, Lee, Sang-Jik, Rose, Jocelyn K. C, Mueller, Lukas A, York, Thomas L, Wicker Leader, Thomas, Buchmann, Jan P, Tanskanen, Jaakko, Schulman Leader, Alan H, Gundlach, Heidrun, Bevan, Michael, Costa de Oliveira, Antonio, da C. Maia, Luciano, Belknap, William, Jiang, Ning, Lai, Jinsheng, Zhu, Liucun, Ma, Jianxin, Sun, Cheng, Pritham, Ellen, Salse Leader, Jerome, Murat, Florent, Abrouk, Michael, Mayer, Klaus, Bruggmann, Remy, Messing, Joachim, Fahlgren, Noah, Sullivan, Christopher M, Carrington, James C, Chapman, Elisabeth J, May, Greg D, Zhai, Jixian, Ganssmann, Matthias, Guna Ranjan Gurazada, Sai, German, Marcelo, Meyers, Blake C, Green Leader, Pamela J, Tyler, Ludmila, Wu, Jiajie, Thomson, James, Chen, Shan, Scheller, Henrik V, Harholt, Jesper, Ulvskov, Peter, Kimbrel, Jeffrey A, Bartley, Laura E, Cao, Peijian, Jung, Ki-Hong, Sharma, Manoj K, Vega-Sanchez, Miguel, Ronald, Pamela, Dardick, Christopher D, De Bodt, Stefanie, Verelst, Wim, Inzé, Dirk, Heese, Maren, Schnittger, Arp, Yang, Xiaohan, Kalluri, Udaya C, Tuskan, Gerald A, Hua, Zhihua, Vierstra, Richard D, Cui, Yu, Ouyang, Shuhong, Sun, Qixin, Liu, Zhiyong, Yilmaz, Alper, Grotewold, Erich, Sibout, Richard, Hematy, Kian, Mouille, Gregory, Höfte, Herman, Michael, Todd, Pelloux, Jérome, O’Connor, Devin, Schnable, James, Rowe, Scott, Harmon, Frank, Cass, Cynthia L, Sedbrook, John C, Byrne, Mary E, Walsh, Sean, Higgins, Janet, Li, Pinghua, Brutnell, Thomas, Unver, Turgay, Budak, Hikmet, Belcram, Harry, Charles, Mathieu, Chalhoub, Boulos, Baxter, Ivan

Publikováno v: Nature
Nature, Nature Publishing Group, 2010, 463, pp.763-768. ⟨10.1038/nature08747⟩
Nature, 2010, 463, pp.763-768. ⟨10.1038/nature08747⟩
Vogel, John P; Garvin, David F; Mockler, Todd C; Schmutz, Jeremy; Rokhsar, Dan; Bevan, Michael W; et al.(2010). Genome sequencing and analysis of the model grass Brachypodium distachyon. Nature, 463(7282), 763-768. doi: 10.1038/nature08747. UC Davis: Retrieved from: http://www.escholarship.org/uc/item/0pd789wt

Principal investigators John P. Vogel1, David F. Garvin2, Todd C. Mockler3, Jeremy Schmutz4, Dan Rokhsar5,6, Michael W. Bevan7; DNA sequencing and assembly Kerrie Barry5, Susan Lucas5, Miranda Harmon-Smith5, Kathleen Lail5, Hope Tice5, Jeremy Schmutz

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::c454b39a31be3a5b54e7f2cad10b058f
https://doi.org/10.1038/nature08747

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Estimation of 2Nes From Temporal Allele Frequency Data.

Autor: Bollback, Jonathan P.¹ j.p.bolIback@ed.ac.uk, York, Thomas L.², Nielsen, Rasmus¹

Publikováno v: Genetics. May2008, Vol. 179 Issue 1, p497-502. 6p.

Bayesian Estimation of the Number of Inversions in the History of Two Chromosomes

Autor: York, Thomas L., Durrett, Richard, Nielsen, Rasmus

Publikováno v: Journal of Computational Biology; December 01, 2002, Vol. 9 Issue: 6 p805-818, 14p