Zobrazeno 1 - 10
of 63
pro vyhledávání: '"Yiliang Ding"'
Autor:
Yuwei Zhang, Jieyu Zhao, Xiaona Chen, Yulong Qiao, Jinjin Kang, Xiaofan Guo, Feng Yang, Kaixin Lyu, Yiliang Ding, Yu Zhao, Hao Sun, Chun-Kit Kwok, Huating Wang
Publikováno v:
Nature Communications, Vol 15, Iss 1, Pp 1-19 (2024)
Abstract RNA structure constitutes a new layer of gene regulatory mechanisms. RNA binding proteins can modulate RNA secondary structures, thus participating in post-transcriptional regulation. The DEAH-box helicase 36 (DHX36) is known to bind and unw
Externí odkaz:
https://doaj.org/article/27faa842f0114ba5af54b24d34eec4ae
Autor:
Zhen Wang, Xiaofan Zhang, Chunyan Liu, Susan Duncan, Runlai Hang, Jing Sun, Lilan Luo, Yiliang Ding, Xiaofeng Cao
Publikováno v:
Nature Communications, Vol 15, Iss 1, Pp 1-14 (2024)
Abstract Translation, a fundamental process regulating cellular growth and proliferation, relies on functional ribosomes. As sessile organisms, plants have evolved adaptive strategies to maintain a delicate balance between growth and stress response.
Externí odkaz:
https://doaj.org/article/fd3542852d9245288a9b07d05fce735d
Autor:
Yueying Zhang, Qianli Dong, Zhen Wang, Qinzhe Liu, Haopeng Yu, Wenqing Sun, Jitender Cheema, Qiancheng You, Ling Ding, Xiaofeng Cao, Chuan He, Yiliang Ding, Huakun Zhang
Publikováno v:
Nature Communications, Vol 15, Iss 1, Pp 1-13 (2024)
Abstract Plants, as sessile organisms, deploy transcriptional dynamics for adapting to extreme growth conditions such as cold stress. Emerging evidence suggests that chromatin architecture contributes to transcriptional regulation. However, the relat
Externí odkaz:
https://doaj.org/article/974491f2ee644387a5bd16cccf50c044
Autor:
Xiaofei Yang, Haopeng Yu, Susan Duncan, Yueying Zhang, Jitender Cheema, Haifeng Liu, J. Benjamin Miller, Jie Zhang, Chun Kit Kwok, Huakun Zhang, Yiliang Ding
Publikováno v:
Nature Communications, Vol 13, Iss 1, Pp 1-9 (2022)
During evolution, plants have adapted to habitats with distinct temperature ranges. In this study, scientists report that a specific RNA structure motif, RNA G-quadruplex (RG4) is enriched across genomes of plant species growing in colder climates.
Externí odkaz:
https://doaj.org/article/c575463197754e1f8bf3b7e2fa3d5d32
Publikováno v:
Frontiers in Plant Science, Vol 14 (2023)
Externí odkaz:
https://doaj.org/article/39aa9021bf314652999602ba5e868398
Autor:
Xiaofei Yang, Haopeng Yu, Wenqing Sun, Ling Ding, Ji Li, Jitender Cheema, Ricardo Ramirez-Gonzalez, Xuebo Zhao, Azahara C. Martín, Fei Lu, Bao Liu, Cristobal Uauy, Yiliang Ding, Huakun Zhang
Publikováno v:
Genome Biology, Vol 22, Iss 1, Pp 1-26 (2021)
Abstract Background Polyploidy, especially allopolyploidy, which entails merging divergent genomes via hybridization and whole-genome duplication (WGD), is a major route to speciation in plants. The duplication among the parental genomes (subgenomes)
Externí odkaz:
https://doaj.org/article/0a63eaf5cdfc48b6b35fa36cf78aad94
Autor:
Zhenshan Liu, Qi Liu, Xiaofei Yang, Yueying Zhang, Matthew Norris, Xiaoxi Chen, Jitender Cheema, Huakun Zhang, Yiliang Ding
Publikováno v:
Genome Biology, Vol 22, Iss 1, Pp 1-22 (2021)
Abstract Background mRNA processing is critical for gene expression. A challenge in regulating mRNA processing is how to recognize the actual mRNA processing sites, such as splice and polyadenylation sites, when the sequence content is insufficient f
Externí odkaz:
https://doaj.org/article/4a773ab1a1134842a7aab5570adbc3a0
Publikováno v:
Frontiers in Molecular Biosciences, Vol 9 (2022)
Deep learning, or artificial neural networks, is a type of machine learning algorithm that can decipher underlying relationships from large volumes of data and has been successfully applied to solve structural biology questions, such as RNA structure
Externí odkaz:
https://doaj.org/article/ecb31aac9bf84640a2f348bfa85e53b0
Autor:
Xiaofei Yang, Jitender Cheema, Yueying Zhang, Hongjing Deng, Susan Duncan, Mubarak Ishaq Umar, Jieyu Zhao, Qi Liu, Xiaofeng Cao, Chun Kit Kwok, Yiliang Ding
Publikováno v:
Genome Biology, Vol 21, Iss 1, Pp 1-23 (2020)
Abstract Background Guanine-rich sequences are able to form complex RNA structures termed RNA G-quadruplexes in vitro. Because of their high stability, RNA G-quadruplexes are proposed to exist in vivo and are suggested to be associated with important
Externí odkaz:
https://doaj.org/article/f68efba098614fce81bb6eca8d4709d1
Publikováno v:
Frontiers in Plant Science, Vol 9 (2018)
The dynamic structure of RNA plays a central role in post-transcriptional regulation of gene expression such as RNA maturation, degradation, and translation. With the rise of next-generation sequencing, the study of RNA structure has been transformed
Externí odkaz:
https://doaj.org/article/feec3cc635aa438da7f93c7b61c4346c