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Akademický článek

Genomic analysis of methanogenic archaea reveals a shift towards energy conservation

Autor: Sean P. Gilmore, John K. Henske, Jessica A. Sexton, Kevin V. Solomon, Susanna Seppälä, Justin I Yoo, Lauren M. Huyett, Abe Pressman, James Z. Cogan, Veronika Kivenson, Xuefeng Peng, YerPeng Tan, David L. Valentine, Michelle A. O’Malley

Publikováno v: BMC Genomics, Vol 18, Iss 1, Pp 1-14 (2017)

Abstract Background The metabolism of archaeal methanogens drives methane release into the environment and is critical to understanding global carbon cycling. Methanogenesis operates at a very low reducing potential compared to other forms of respira

Externí odkaz: https://doaj.org/article/83c46adfac92408e916a77e9eb8b00c3

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Genomic analysis of methanogenic archaea reveals a shift towards energy conservation

Autor: YerPeng Tan, John K. Henske, Jessica A. Sexton, Lauren M. Huyett, Veronika Kivenson, Justin I. Yoo, Sean P. Gilmore, Susanna Seppälä, Kevin V. Solomon, James Z. Cogan, Xuefeng Peng, Michelle A. O’Malley, David L. Valentine, Abe Pressman

Publikováno v: BMC Genomics, Vol 18, Iss 1, Pp 1-14 (2017)
BMC genomics, vol 18, iss 1
Gilmore, S P, Henske, J K, Sexton, J A, Solomon, K V, Seppala, S, Yoo, J I, Huyett, L M, Pressman, A, Cogan, J Z, Kivenson, V, Peng, X, Tan, Y, Valentine, D L & O'Malley, M A 2017, ' Genomic analysis of methanogenic archaea reveals a shift towards energy conservation ', B M C Genomics, vol. 18, no. 1, 639 . https://doi.org/10.1186/s12864-017-4036-4
BMC Genomics

Background The metabolism of archaeal methanogens drives methane release into the environment and is critical to understanding global carbon cycling. Methanogenesis operates at a very low reducing potential compared to other forms of respiration and

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::2f37600c3398fd55a32277266a7a83a0
http://link.springer.com/article/10.1186/s12864-017-4036-4

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Infiltration of chitin by protein coacervates defines the squid beak mechanical gradient

Autor: Paul A. Guerette, Shawn Hoon, J. Herbert Waite, Wei Wei, Ali Miserez, Ali Ghadban, Cai Hao, YerPeng Tan

Publikováno v: Tan, Y; Hoon, S; Guerette, PA; Wei, W; Ghadban, A; Hao, C; et al.(2015). Infiltration of chitin by protein coacervates defines the squid beak mechanical gradient. Nature Chemical Biology, 11(7), 488-495. doi: 10.1038/nchembio.1833. UC Santa Barbara: Retrieved from: http://www.escholarship.org/uc/item/3f21p9m3
Nature chemical biology, vol 11, iss 7

© 2015 Nature America, Inc. All rights reserved. The beak of the jumbo squid Dosidicus gigas is a fascinating example of how seamlessly nature builds with mechanically mismatched materials. A 200-fold stiffness gradient begins in the hydrated chitin

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::920bb47fce46c34da450bbe62342730d
https://doi.org/10.1038/nchembio.1833

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Speeding up the self-assembly of a DNA nanodevice using a variety of polar solvents

Autor: Boya Wang, Fan Hong, Ruixue Duan, Fan Xia, Shaofang Xu, Xiaoding Lou, Zhifei Chen, Bernard Yurke, YerPeng Tan, Wei Wei, Di Kang

Publikováno v: Nanoscale. 6:14153-14157

The specific recognition and programmable assembly properties make DNA a potential material for nanodevices. However, the more intelligent the nanodevice is, the more complicated the structure of the nanodevice is, which limits the speed of DNA assem

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::d22512d56059c2d65dc514f065df5e7d
https://doi.org/10.1039/c4nr02257b

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Layer-by-Layer Polyelectrolyte Deposition: A Mechanism for Forming Biocomposite Materials

Autor: Ali Miserez, YerPeng Tan, J. Herbert Waite, Wei Wei, Umit Hakan Yildiz

Publikováno v: Biomacromolecules. 14:1715-1726

Complex coacervates prepared from poly(aspartic acid) (polyAsp) and poly-l-histidine (polyHis) were investigated as models of the metastable protein phases used in the formation of biological structures such as squid beak. When mixed, polyHis and pol

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::299aaad8d8081aec604578a62e42afaa
https://doi.org/10.1021/bm400448w

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An Underwater Surface-Drying Peptide Inspired by a Mussel Adhesive Protein

Autor: YerPeng Tan, Luigi Petrone, Jacob N. Israelachvili, J. Herbert Waite, Wei Wei, Ali Miserez, Hao Cai

Publikováno v: Wei, W; Petrone, L; Tan, Y; Cai, H; Israelachvili, JN; Miserez, A; et al.(2016). An Underwater Surface-Drying Peptide Inspired by a Mussel Adhesive Protein. ADVANCED FUNCTIONAL MATERIALS, 26(20), 3496-3507. doi: 10.1002/adfm.201600210. UC Santa Barbara: Retrieved from: http://www.escholarship.org/uc/item/3wk6957r
Advanced functional materials, vol 26, iss 20

Water hampers the formation of strong and durable bonds between adhesive polymers and solid surfaces, in turn hindering the development of adhesives for biomedical and marine applications. Inspired by mussel adhesion, a mussel foot protein homologue

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::2b16ae15b1647d28f083a62d4a23f177
https://europepmc.org/articles/PMC5102340/

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Bridging adhesion of mussel-inspired peptides: role of charge, chain length, and surface type

Autor: Matthew A. Gebbie, Nadine R. Martinez Rodriguez, Wei Wei, Jing Yu, YerPeng Tan, Jacob N. Israelachvili, J. Herbert Waite

Publikováno v: Langmuir
Langmuir : the ACS journal of surfaces and colloids, vol 31, iss 3
Wei, W; Yu, J; Gebbie, MA; Tan, Y; Martinez Rodriguez, NR; Israelachvili, JN; et al.(2015). Bridging adhesion of mussel-inspired peptides: Role of charge, chain length, and surface type. Langmuir, 31(3), 1105-1112. doi: 10.1021/la504316q. UC Santa Barbara: Retrieved from: http://www.escholarship.org/uc/item/8qv1p2dt

© 2014 American Chemical Society. The 3,4-dihydroxyphenylalanine (Dopa)-containing proteins of marine mussels provide attractive design paradigms for engineering synthetic polymers that can serve as high performance wet adhesives and coatings. Altho

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::819e12ba62199a406ed3f9dcbcd2892b
https://pubmed.ncbi.nlm.nih.gov/25540823

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A mussel-derived one component adhesive coacervate

Autor: Jing Yu, Jacob N. Israelachvili, J. Herbert Waite, Wei Wei, YerPeng Tan, Nadine R. Martinez Rodriguez

Publikováno v: Wei, W; Tan, Y; Martinez Rodriguez, NR; Yu, J; Israelachvili, JN; & Waite, JH. (2014). A mussel-derived one component adhesive coacervate. Acta Biomaterialia, 10(4), 1663-1670. doi: 10.1016/j.actbio.2013.09.007. UC Santa Barbara: Retrieved from: http://www.escholarship.org/uc/item/18g2n1xw

Marine organisms process and deliver many of their underwater coatings and adhesives as complex fluids. In marine mussels one such fluid, secreted during the formation of adhesive plaques, consists of a concentrated colloidal suspension of a mussel f

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::061ee97ad3df414680c35fc10e574b7f
https://pubmed.ncbi.nlm.nih.gov/24060881

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