Longitudinal genomic surveillance of carriage and transmission of Clostridioides difficile in an intensive care unit.

Autor: Miles-Jay A; Department of Microbiology and Immunology, University of Michigan Medical School, Ann Arbor, MI, USA., Snitkin ES; Department of Microbiology and Immunology, University of Michigan Medical School, Ann Arbor, MI, USA. esnitkin@umich.edu.; Division of Infectious Diseases, Department of Internal Medicine, University of Michigan, Ann Arbor, MI, USA. esnitkin@umich.edu., Lin MY; Division of Infectious Diseases, Department of Medicine, Rush University Medical Center, Chicago, IL, USA., Shimasaki T; Division of Infectious Diseases, Department of Medicine, Rush University Medical Center, Chicago, IL, USA., Schoeny M; Division of Infectious Diseases, Department of Medicine, Rush University Medical Center, Chicago, IL, USA., Fukuda C; Division of Infectious Diseases, Department of Medicine, Rush University Medical Center, Chicago, IL, USA., Dangana T; Division of Infectious Diseases, Department of Medicine, Rush University Medical Center, Chicago, IL, USA., Moore N; Division of Infectious Diseases, Department of Medicine, Rush University Medical Center, Chicago, IL, USA., Sansom SE; Division of Infectious Diseases, Department of Medicine, Rush University Medical Center, Chicago, IL, USA., Yelin RD; Division of Infectious Diseases, Department of Medicine, Rush University Medical Center, Chicago, IL, USA., Bell P; Division of Infectious Diseases, Department of Medicine, Rush University Medical Center, Chicago, IL, USA., Rao K; Division of Infectious Diseases, Department of Internal Medicine, University of Michigan, Ann Arbor, MI, USA., Keidan M; Division of Infectious Diseases, Department of Internal Medicine, University of Michigan, Ann Arbor, MI, USA., Standke A; Division of Infectious Diseases, Department of Internal Medicine, University of Michigan, Ann Arbor, MI, USA., Bassis C; Division of Infectious Diseases, Department of Internal Medicine, University of Michigan, Ann Arbor, MI, USA., Hayden MK; Division of Infectious Diseases, Department of Medicine, Rush University Medical Center, Chicago, IL, USA., Young VB; Department of Microbiology and Immunology, University of Michigan Medical School, Ann Arbor, MI, USA.; Division of Infectious Diseases, Department of Internal Medicine, University of Michigan, Ann Arbor, MI, USA.

Publikováno v: Nature medicine [Nat Med] 2023 Oct; Vol. 29 (10), pp. 2526-2534. Date of Electronic Publication: 2023 Sep 18.

Integrated genomic, epidemiologic investigation of Candida auris skin colonization in a skilled nursing facility.

Autor: Proctor DM; Microbial Genomics Section, Translational and Functional Genomics Branch, National Human Genome Research Institute, National Institutes of Health, Bethesda, MD, USA., Dangana T; Department of Internal Medicine, Division of Infectious Diseases, Rush University Medical Center, Chicago, IL, USA., Sexton DJ; Mycotic Diseases Branch, Centers for Disease Control and Prevention, Atlanta, GA, USA., Fukuda C; Department of Internal Medicine, Division of Infectious Diseases, Rush University Medical Center, Chicago, IL, USA., Yelin RD; Department of Internal Medicine, Division of Infectious Diseases, Rush University Medical Center, Chicago, IL, USA., Stanley M; Department of Internal Medicine, Division of Infectious Diseases, Rush University Medical Center, Chicago, IL, USA., Bell PB; Department of Internal Medicine, Division of Infectious Diseases, Rush University Medical Center, Chicago, IL, USA., Baskaran S; Department of Internal Medicine, Division of Infectious Diseases, Rush University Medical Center, Chicago, IL, USA., Deming C; Microbial Genomics Section, Translational and Functional Genomics Branch, National Human Genome Research Institute, National Institutes of Health, Bethesda, MD, USA., Chen Q; Microbial Genomics Section, Translational and Functional Genomics Branch, National Human Genome Research Institute, National Institutes of Health, Bethesda, MD, USA., Conlan S; Microbial Genomics Section, Translational and Functional Genomics Branch, National Human Genome Research Institute, National Institutes of Health, Bethesda, MD, USA., Park M; NIH Intramural Sequencing Center, National Human Genome Research Institute, National Institutes of Health, Bethesda, MD, USA., Welsh RM; Mycotic Diseases Branch, Centers for Disease Control and Prevention, Atlanta, GA, USA., Vallabhaneni S; Mycotic Diseases Branch, Centers for Disease Control and Prevention, Atlanta, GA, USA.; Division of Healthcare Quality Promotion, NCEZID, CDC, Atlanta, GA, USA., Chiller T; Mycotic Diseases Branch, Centers for Disease Control and Prevention, Atlanta, GA, USA., Forsberg K; Mycotic Diseases Branch, Centers for Disease Control and Prevention, Atlanta, GA, USA., Black SR; Communicable Disease Program, Chicago Department of Public Health, Chicago, IL, USA., Pacilli M; Communicable Disease Program, Chicago Department of Public Health, Chicago, IL, USA., Kong HH; Dermatology Branch, National Institute of Arthritis and Musculoskeletal and Skin Diseases, National Institutes of Health, Bethesda, MD, USA., Lin MY; Department of Internal Medicine, Division of Infectious Diseases, Rush University Medical Center, Chicago, IL, USA., Schoeny ME; College of Nursing, Rush University, Chicago, IL, USA., Litvintseva AP; Mycotic Diseases Branch, Centers for Disease Control and Prevention, Atlanta, GA, USA., Segre JA; Microbial Genomics Section, Translational and Functional Genomics Branch, National Human Genome Research Institute, National Institutes of Health, Bethesda, MD, USA. jsegre@nhgri.nih.gov., Hayden MK; Department of Internal Medicine, Division of Infectious Diseases, Rush University Medical Center, Chicago, IL, USA. mhayden@rush.edu.

Publikováno v: Nature medicine [Nat Med] 2021 Aug; Vol. 27 (8), pp. 1401-1409. Date of Electronic Publication: 2021 Jun 21.

Increased Relative Abundance of Klebsiella pneumoniae Carbapenemase-producing Klebsiella pneumoniae Within the Gut Microbiota Is Associated With Risk of Bloodstream Infection in Long-term Acute Care Hospital Patients.

Autor: Shimasaki T; Department of Internal Medicine, Division of Infectious Diseases, Rush University Medical Center, Chicago, Illinois., Seekatz A; Department of Internal Medicine, Division of Infectious Diseases, University of Michigan Medical School, Ann Arbor., Bassis C; Department of Internal Medicine, Division of Infectious Diseases, University of Michigan Medical School, Ann Arbor., Rhee Y; Department of Internal Medicine, Division of Infectious Diseases, Rush University Medical Center, Chicago, Illinois., Yelin RD; Department of Internal Medicine, Division of Infectious Diseases, Rush University Medical Center, Chicago, Illinois., Fogg L; Department of Nursing, Rush University Medical Center, Chicago, Illinois., Dangana T; Department of Internal Medicine, Division of Infectious Diseases, Rush University Medical Center, Chicago, Illinois., Cisneros EC; Department of Internal Medicine, Division of Infectious Diseases, Rush University Medical Center, Chicago, Illinois.; Hospital Nacional Cayetano Heredia, Lima, Peru., Weinstein RA; Department of Internal Medicine, Division of Infectious Diseases, Rush University Medical Center, Chicago, Illinois., Okamoto K; Department of Internal Medicine, Division of Infectious Diseases, Rush University Medical Center, Chicago, Illinois.; University of Tokyo Hospital, Japan., Lolans K; Department of Internal Medicine, Division of Infectious Diseases, Rush University Medical Center, Chicago, Illinois., Schoeny M; Department of Nursing, Rush University Medical Center, Chicago, Illinois., Lin MY; Department of Internal Medicine, Division of Infectious Diseases, Rush University Medical Center, Chicago, Illinois., Moore NM; Department of Internal Medicine, Division of Infectious Diseases, Rush University Medical Center, Chicago, Illinois., Young VB; Department of Internal Medicine, Division of Infectious Diseases, University of Michigan Medical School, Ann Arbor., Hayden MK; Department of Internal Medicine, Division of Infectious Diseases, Rush University Medical Center, Chicago, Illinois.

Publikováno v: Clinical infectious diseases : an official publication of the Infectious Diseases Society of America [Clin Infect Dis] 2019 May 30; Vol. 68 (12), pp. 2053-2059.