Updates to HCOP: the HGNC comparison of orthology predictions tool.

Autor: Yates, Bethan¹ (AUTHOR) hgnc@genenames.org, Gray, Kristian A¹ (AUTHOR), Jones, Tamsin E M¹ (AUTHOR), Bruford, Elspeth A^1,2 (AUTHOR)

Publikováno v: Briefings in Bioinformatics. Nov2021, Vol. 22 Issue 6, p1-9. 9p.

The Quest for Orthologs orthology benchmark service in 2022

Autor: Nevers, Yannis, Jones, Tamsin EM, Jyothi, Dushyanth, Yates, Bethan, Ferret, Meritxell, Portell-Silva, Laura, Codo, Laia, Cosentino, Salvatore, Marcet-Houben, Marina, Vlasova, Anna, Poidevin, Laetitia, Kress, Arnaud, Hickman, Mark, Persson, Emma, Piližota, Ivana, Guijarro-Clarke, Cristina, OpenEBench Team The Quest For Orthologs Consortium, Iwasaki, Wataru, Lecompte, Odile, Sonnhammer, Erik, Roos, David S, Gabaldón, Toni, Thybert, David, Thomas, Paul D, Hu, Yanhui, Emms, David M, Bruford, Elspeth, Capella-Gutierrez, Salvador, Martin, Maria J, Dessimoz, Christophe, Altenhoff, Adrian

The Orthology Benchmark Service (https://orthology.benchmarkservice.org) is the gold standard for orthology inference evaluation, supported and maintained by the Quest for Orthologs consortium. It is an essential resource to compare existing and new

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::52d106c4d6757a7866d6d23566de2916

Quest for Orthologs orthology benchmark service in 2022.

Autor: Nevers, Yannis, Jones, Tamsin E M, Jyothi, Dushyanth, Yates, Bethan, Ferret, Meritxell, Portell-Silva, Laura, Codo, Laia, Cosentino, Salvatore, Marcet-Houben, Marina, Vlasova, Anna, Poidevin, Laetitia, Kress, Arnaud, Hickman, Mark, Persson, Emma, Piližota, Ivana, Guijarro-Clarke, Cristina, Consortium, the OpenEBench team the Quest for Orthologs, Iwasaki, Wataru, Lecompte, Odile, Sonnhammer, Erik

Publikováno v: Nucleic Acids Research; 7/5/2022, Vol. 50 Issue W1, pW623-W632, 10p

Gearing up to handle the mosaic nature of life in the quest for orthologs

Autor: Forslund, Kristoffer, Pereira, Cécile, Capella-Gutiérrez, Salvador, da Silva, Alan Sousa, Altenhoff, Adrian, Huerta-Cepas, Jaime, Muffato, Matthieu, Patricio, Mateus, Vandepoele, Klaas, Ebersberger, Ingo, Blake, Judith, Fernández Breis, Jesualdo Tomás, Boeckmann, Brigitte, Gabaldon, Toni, Sonnhammer, Erik, Dessimoz, Christophe, Lewis, Suzanna, Bello, Carla, Briois, Sébastien, Chalstrey, Edward, Chiba, Hirokazu, Conchillo-Solé, Oscar, Daubin, Vincent, DeLuca, Todd, Dufayard, Jean-François, Durand, Dannie, Fernández-Breis, Jesualdo Tomás, Glover, Natasha, Hauser, Alexander, Heller, Davide, Kaduk, Mateus, Koch, Jan, Koonin, Eugene, Kriventseva, Evgenia, Kuraku, Shigehiro, Lecompte, Odile, Lespinet, Olivier, Levy, Jeremy, Liebeskind, Benjamin, Linard, Benjamin, Marcet-Houben, Marc, Kauffmann, Martin, McWhite, Claire, Mekhedov, Sergei, Moretti, Sebastien, Müller, Steven, Nadia, El-Mabrouk, Notredame, Cedric, Penel, Simon, Pilizota, Ivana, Redestig, Henning, Robinson-Rechavi, Marc, Schreiber, Fabian, Sjölander, Kimmen, Škunca, Nives, Steinegger, Martin, Szklarczyk, Damian, Thomas, Paul, Thuer, Ernst, Train, Clément, Uchiyama, Ikuo, Wittwer, Lucas, Xenarios, Ioannis, Yates, Bethan, Zdobnov, Evgeny, Waterhouse, Robert

Publikováno v: Bioinformatics
Bioinformatics, Oxford University Press (OUP), 2018, 34 (2), pp.323-329. ⟨10.1093/bioinformatics/btx542⟩
Bioinformatics, 2018, 34 (2), pp.323-329. ⟨10.1093/bioinformatics/btx542⟩
Bioinformatics, Oxford University Press (OUP), 2018, 34 (2), pp.323-329. 〈10.1093/bioinformatics/btx542〉

International audience; The Quest for Orthologs (QfO) is an open collaboration framework for experts in comparative phylogenomics and related research areas who have an interest in highly accurate orthology predictions and their applications. We here

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=dedup_wf_001::d06fa7d88f3f9f36a00153d667728ca4
https://hal.archives-ouvertes.fr/hal-01758841

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