Zobrazeno 1 - 10
of 81
pro vyhledávání: '"Yasuo, Yoshikuni"'
Crystal structure of the 4-hydroxybutyryl-CoA synthetase (ADP-forming) from nitrosopumilus maritimus
Autor:
Jerome Johnson, Bradley B. Tolar, Bilge Tosun, Yasuo Yoshikuni, Christopher A. Francis, Soichi Wakatsuki, Hasan DeMirci
Publikováno v:
Communications Biology, Vol 7, Iss 1, Pp 1-10 (2024)
Abstract The 3-hydroxypropionate/4-hydroxybutyrate (3HP/4HB) cycle from ammonia-oxidizing Thaumarchaeota is currently considered the most energy-efficient aerobic carbon fixation pathway. The Nitrosopumilus maritimus 4-hydroxybutyryl-CoA synthetase (
Externí odkaz:
https://doaj.org/article/b0074faf961d4e1784f937a5b876db42
Autor:
Youngchang Kim, Seung Hwan Lee, Priyanka Gade, Maren Nattermann, Natalia Maltseva, Michael Endres, Jing Chen, Philipp Wichmann, Yang Hu, Daniel G. Marchal, Yasuo Yoshikuni, Tobias J. Erb, Ramon Gonzalez, Karolina Michalska, Andrzej Joachimiak
Publikováno v:
Communications Chemistry, Vol 7, Iss 1, Pp 1-10 (2024)
Abstract 2-Hydroxyacyl-CoA lyase/synthase (HACL/S) is a thiamine diphosphate (ThDP)-dependent versatile enzyme originally discovered in the mammalian α-oxidation pathway. HACL/S natively cleaves 2-hydroxyacyl-CoAs and, in its reverse direction, cond
Externí odkaz:
https://doaj.org/article/6aa21acb3e0a48658c899fdf3ca1d48f
Publikováno v:
Frontiers in Microbiomes, Vol 3 (2024)
The use of potentially beneficial microorganisms in agriculture (microbial inoculants) has rapidly accelerated in recent years. For microbial inoculants to be effective as agricultural tools, these organisms must be able to survive and persist in nov
Externí odkaz:
https://doaj.org/article/fe4f6227a1d44a89a0f47e2210798b83
Autor:
Veronika Dubinkina, Shounak Bhogale, Ping-Hung Hsieh, Payam Dibaeinia, Ananthan Nambiar, Sergei Maslov, Yasuo Yoshikuni, Saurabh Sinha
Publikováno v:
Microbiology Spectrum, Vol 12, Iss 1 (2024)
ABSTRACT Because of its natural stress tolerance to low pH, Issatchenkia orientalis (a.k.a. Pichia kudriavzevii) is a promising non-model yeast for bio-based production of organic acids. Yet, this organism is relatively unstudied, and specific mechan
Externí odkaz:
https://doaj.org/article/89a16c9c907e4e479c355d574216e0cf
Autor:
Rahul Gauttam, Thomas Eng, Zhiying Zhao, Qurrat ul ain Rana, Blake A. Simmons, Yasuo Yoshikuni, Aindrila Mukhopadhyay, Steven W. Singer
Publikováno v:
Microbial Biotechnology, Vol 16, Iss 3, Pp 645-661 (2023)
Abstract Pseudomonas putida has emerged as a promising host for the conversion of biomass‐derived sugars and aromatic intermediates into commercially relevant biofuels and bioproducts. Most of the strain development studies previously published hav
Externí odkaz:
https://doaj.org/article/7d0983234bd548f5b6903c4775bdab7c
Autor:
Ruonan Wu, Clyde A. Smith, Garry W. Buchko, Ian K. Blaby, David Paez-Espino, Nikos C. Kyrpides, Yasuo Yoshikuni, Jason E. McDermott, Kirsten S. Hofmockel, John R. Cort, Janet K. Jansson
Publikováno v:
Nature Communications, Vol 13, Iss 1, Pp 1-14 (2022)
Metagenomics is revealing auxiliary metabolic genes (AMGs) in soil viral genomes. Here, authors solve the crystal structure for a soil viral AMG product, free and ligand bound, and show the protein can decompose chitin, a common carbon polymer.
Externí odkaz:
https://doaj.org/article/8096e82d3dc740d8a095035cfffc6df7
Autor:
Zong-Yen Wu, Wan Sun, Yihui Shen, Jimmy Pratas, Patrick F. Suthers, Ping-Hung Hsieh, Sudharsan Dwaraknath, Joshua D. Rabinowitz, Costas D. Maranas, Zengyi Shao, Yasuo Yoshikuni
Publikováno v:
Metabolic Engineering Communications, Vol 16, Iss , Pp e00220- (2023)
Methyl methacrylate (MMA) is an important petrochemical with many applications. However, its manufacture has a large environmental footprint. Combined biological and chemical synthesis (semisynthesis) may be a promising alternative to reduce both cos
Externí odkaz:
https://doaj.org/article/f0ae360fe4e94af9aa2f09313f01e0f2
Publikováno v:
Frontiers in Microbiomes; 2024, p1-10, 10p
Autor:
Ebru Destan, Busra Yuksel, Bradley B. Tolar, Esra Ayan, Sam Deutsch, Yasuo Yoshikuni, Soichi Wakatsuki, Christopher A. Francis, Hasan DeMirci
Publikováno v:
Scientific Reports, Vol 11, Iss 1, Pp 1-11 (2021)
Abstract The ammonia-oxidizing thaumarchaeal 3-hydroxypropionate/4-hydroxybutyrate (3HP/4HB) cycle is one of the most energy-efficient CO2 fixation cycles discovered thus far. The protein encoded by Nmar_1308 (from Nitrosopumilus maritimus SCM1) is a
Externí odkaz:
https://doaj.org/article/9facd89c002a40c5b7cd6090b588717b
Publikováno v:
Communications Biology, Vol 4, Iss 1, Pp 1-13 (2021)
Khlystov et al. introduce a new plant-based system (N. benthamiana) as a platform to rapidly produce a diverse array of recombinant fungal lignin-degrading enzymes. This study provides an initial framework to better understand the coordinated efforts
Externí odkaz:
https://doaj.org/article/9d76764fd297425ca0a8c47f8f58a487