Zobrazeno 1 - 10
of 818
pro vyhledávání: '"Yamamoto, Eiji"'
Autor:
Watanabe, Fuga, Akimoto, Takuma, Best, Robert B., Lindorff-Larsen, Kresten, Metzler, Ralf, Yamamoto, Eiji
In living cells, intrinsically disordered proteins (IDPs), such as FUS and DDX4, undergo phase separation, forming biomolecular condensates. Using molecular dynamics simulations, we investigate their behavior in their respective homogenous droplets.
Externí odkaz:
http://arxiv.org/abs/2401.10438
Publikováno v:
J. Chem. Phys. (2024)
Dimensions and molecular structure play pivotal roles in the principle of heat conduction. The dimensional characteristics of solution within nanoscale systems depend on the degrees of confinement. However, the influence of such variations on heat tr
Externí odkaz:
http://arxiv.org/abs/2401.02595
Aquaporins (AQPs) are recognized as transmembrane water channels that facilitate selective water permeation through their monomeric pores. Among the AQP family, AQP6 has a unique characteristic as an anion channel, which is allosterically controlled
Externí odkaz:
http://arxiv.org/abs/2311.04545
Complex systems such as protein conformational fluctuations and supercooled liquids exhibit a long relaxation time and are considered to posses multiple relaxation times. We analytically obtain the exact correlation function for stochastic processes
Externí odkaz:
http://arxiv.org/abs/2305.11357
Autor:
Sakamoto, Ken, Akimoto, Takuma, Muramatsu, Mayu, Sansom, Mark S. P., Metzler, Ralf, Yamamoto, Eiji
Publikováno v:
PNAS Nexus (2023)
Cell membranes phase separate into ordered ${\rm L_o}$ and disordered ${\rm L_d}$ domains depending on their compositions. This membrane compartmentalization is heterogeneous and regulates the localization of specific proteins related to cell signali
Externí odkaz:
http://arxiv.org/abs/2301.07932
Autor:
Arai, Noriyoshi, Yamamoto, Eiji, Koishi, Takahiro, Hirano, Yoshinori, Yasuoka, Kenji, Ebisuzaki, Toshikazu
Publikováno v:
Nanoscale Horiz. 8, 652-661 (2023)
We propose a water pump that actively transports water molecules through nanochannels. Spatially asymmetric thermal fluctuations imposed on the channel radius cause unidirectional water flow without osmotic pressure, which can be attributed to hyster
Externí odkaz:
http://arxiv.org/abs/2204.09251
Publikováno v:
Journal of Chemical Physics; 8/7/2024, Vol. 161 Issue 5, p1-12, 12p
Publikováno v:
Commun. Biol. 5, 481 (2022)
Prediction of protein-ligand binding affinity is a major goal in drug discovery. Generally, free energy gap is calculated between two states (e.g., ligand binding and unbinding). The energy gap implicitly includes the effects of changes in protein dy
Externí odkaz:
http://arxiv.org/abs/2109.01339
Publikováno v:
In Biophysical Journal 20 August 2024 123(16):2496-2505
Autor:
Fujita, Koji, Yoshida, Satoshi, Ishizaki, Risa, Yamamoto, Eiji, Takahashi, Naoko, Iwamae, Atsushi
Publikováno v:
In Environmental Research 15 July 2024 253