Zobrazeno 1 - 10
of 127
pro vyhledávání: '"Wojciechowski Pawel"'
Publikováno v:
Foundations of Computing and Decision Sciences, Vol 46, Iss 4, Pp 423-436 (2021)
Implementing a large genomic project is a demanding task, also from the computer science point of view. Besides collecting many genome samples and sequencing them, there is processing of a huge amount of data at every stage of their production and an
Externí odkaz:
https://doaj.org/article/599d40eb65d24ab58a4525fc6b5dff97
Publikováno v:
Foundations of Computing and Decision Sciences, Vol 41, Iss 2, Pp 123-142 (2016)
The problem of reads mapping to a reference genome is one of the most essential problems in modern computational biology. The most popular algorithms used to solve this problem are based on the Burrows-Wheeler transform and the FM-index. However, thi
Externí odkaz:
https://doaj.org/article/1ed789b8650e45d6986c8a94dbabe208
In this paper we introduce Jiffy, the first lock-free, linearizable ordered key-value index that offers both (1) batch updates, which are put and remove operations that are executed atomically, and (2) consistent snapshots used by, e.g., range scan o
Externí odkaz:
http://arxiv.org/abs/2102.01044
Autor:
Wojciechowski, Paweł, Andrzejewska, Weronika, Dobrotvorska, Mariya V., Wang, Ying, Miłosz, Zygmunt, Ossowski, Tomasz, Lewandowski, Mikołaj
Publikováno v:
In Vacuum February 2024 220
Autor:
Blazewicz Jacek, Borowski Marcin, Chaara Wahiba, Kedziora Pawel, Klatzmann David, Lukasiak Piotr, Six Adrien, Wojciechowski Pawel
Publikováno v:
BMC Bioinformatics, Vol 13, Iss 1, p 91 (2012)
Abstract Background The lack of a uniform way for qualitative and quantitative evaluation of vaccine candidates under development led us to set up a standardized scheme for vaccine efficacy and safety evaluation. We developed and implemented molecula
Externí odkaz:
https://doaj.org/article/2eefff3df6a2478fb452eca7edd1433c
Publikováno v:
BMC Bioinformatics, Vol 12, Iss 1, p 181 (2011)
Abstract Background Pairwise sequence alignment methods are widely used in biological research. The increasing number of sequences is perceived as one of the upcoming challenges for sequence alignment methods in the nearest future. To overcome this c
Externí odkaz:
https://doaj.org/article/73fab6bfc3674ff8a4192f0aa005a704
Publikováno v:
In Journal of Parallel and Distributed Computing October 2023 180
In this paper we introduce Creek, a low-latency, eventually consistent replication scheme that also enables execution of strongly consistent operations (akin to ACID transactions). Operations can have arbitrary complex (but deterministic) semantics.
Externí odkaz:
http://arxiv.org/abs/1907.00748
In this article we study the properties of distributed systems that mix eventual and strong consistency. We formalize such systems through acute cloud types (ACTs), abstractions similar to conflict-free replicated data types (CRDTs), which by default
Externí odkaz:
http://arxiv.org/abs/1905.11762
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