A harmonized segmentation protocol for hippocampal and parahippocampal subregions: Why do we need one and what are the key goals?

Autor: Wisse LEM; Penn Image Computing and Science Laboratory, Department of Radiology, University of Pennsylvania, Philadelphia, USA., Daugherty AM; Beckman Institute for Advanced Science and Technology, University of Illinois Urbana-Champaign, Champaign, USA., Olsen RK; Rotman Research Institute, Baycrest Health Sciences, Toronto, Ontario, Canada., Berron D; Institute of Cognitive Neurology and Dementia Research, Otto-von-Guericke University, Magdeburg, Germany., Carr VA; Department of Psychology, Stanford University, Palo Alto, USA.; Department of Psychology, San Jose State University, San Jose, USA., Stark CEL; Department of Neurobiology and Behavior, University of California Irvine, Irvine, USA., Amaral RSC; Cerebral Imaging Centre, Douglas Mental Health University Institute, McGill University, Montreal, Canada.; Departments of Psychiatry and Biological and Biomedical Engineering, McGill University, Montreal, Canada.; Integrated Program in Neuroscience, McGill University, Montreal, Canada., Amunts K; Institute of Neuroscience and Medicine, INM-1, Research Center Jülich, Jülich, Germany.; JARA-BRAIN, Jülich-Aachen Research Alliance, Jülich, Germany.; C. and O. Vogt Institute for Brain Research, Heinrich Heine University Düsseldorf, Düsseldorf, Germany., Augustinack JC; AA Martinos Center for Biomedical Imaging, Department of Radiology, Harvard Medical School, Massachusetts General Hospital, Boston, USA., Bender AR; Center for Lifespan Psychology, Max Planck Institute for Human Development, Berlin, Germany., Bernstein JD; Department of Neurology and Neurological Sciences, Stanford University School of Medicine, Palo Alto, USA., Boccardi M; LANVIE Laboratory of Neuroimaging of Aging, University of Geneva, Geneva, Switzerland., Bocchetta M; Dementia Research Centre, Department of Neurodegenerative Disease, UCL Institute of Neurology, Queen Square, London, UK., Burggren A; Department of Psychiatry and Biobehavioural Sciences, University of California Los Angeles, Los Angeles, USA., Chakravarty MM; Cerebral Imaging Centre, Douglas Mental Health University Institute, McGill University, Montreal, Canada.; Departments of Psychiatry and Biological and Biomedical Engineering, McGill University, Montreal, Canada., Chupin M; INSERM, CNRS, UMR-S975, Institut du Cerveau et de la Moelle Epinière (ICM), Paris, France., Ekstrom A; Center for Neuroscience, University of California Davis, Davis, USA.; Department of Psychology, University of California Davis, Davis, USA., de Flores R; INSERM U1077, Université de Caen Normandie, UMR-S1077, Ecole Pratique des Hautes Etudes, Centre Hospitalier Universitaire de Caen, Caen, France., Insausti R; Human Neuroanatomy Laboratory and C.R.I.B., School of Medicine, University of Castilla-La Mancha, Albacete, Spain., Kanel P; Department of Computer Science, Florida State University, Tallahassee, USA., Kedo O; Institute of Neuroscience and Medicine, INM-1, Research Center Jülich, Jülich, Germany., Kennedy KM; Center for Vital Longevity, School of Behavioral and Brain Sciences, University of Texas at Dallas, Dallas, USA., Kerchner GA; Department of Neurology and Neurological Sciences, Stanford University School of Medicine, Palo Alto, USA., LaRocque KF; Department of Psychology, Stanford University, Palo Alto, USA., Liu X; Department of Computer Science, Florida State University, Tallahassee, USA., Maass A; School of Public Health and Helen Wills Neuroscience Institute, University of California Berkeley, Berkeley, USA., Malykhin N; Department of Biomedical Engineering, University of Alberta, Edmonton, Canada.; The Neuroscience and Mental Health Institute, University of Alberta, Edmonton, Canada.; Department of Psychiatry, University of Alberta, Edmonton, Canada., Mueller SG; Department of Radiology, University of California, San Francisco, USA.; Center for Imaging of Neurodegenerative Diseases, San Francisco VA Medical Center, San Francisco, USA., Ofen N; Psychology Department, Wayne State University, Detroit, USA.; Institute of Gerontology, Wayne State University, Detroit, USA., Palombo DJ; VA Boston Healthcare System, Boston, USA., Parekh MB; Department of Radiology, Stanford University, Palo Alto, USA., Pluta JB; Penn Image Computing and Science Laboratory, Department of Radiology, University of Pennsylvania, Philadelphia, USA., Pruessner JC; McGill Centre for Studies in Aging, Faculty of Medicine, McGill University, Montreal, Canada.; Department of Psychology, McGill University, Montreal, Canada., Raz N; Psychology Department, Wayne State University, Detroit, USA.; Institute of Gerontology, Wayne State University, Detroit, USA., Rodrigue KM; Center for Vital Longevity, School of Behavioral and Brain Sciences, University of Texas at Dallas, Dallas, USA., Schoemaker D; McGill Centre for Studies in Aging, Faculty of Medicine, McGill University, Montreal, Canada.; Department of Psychology, McGill University, Montreal, Canada., Shafer AT; Psychology Department, Wayne State University, Detroit, USA.; Institute of Gerontology, Wayne State University, Detroit, USA., Steve TA; Division of Neurology, Department of Medicine, University of Alberta, Edmonton, Canada., Suthana N; Department of Psychiatry and Biobehavioural Sciences, University of California Los Angeles, Los Angeles, USA.; Department of Neurosurgery, University of California Los Angeles, Los Angeles, USA., Wang L; Northwestern University Feinberg School of Medicine, Chicago, USA., Winterburn JL; Cerebral Imaging Centre, Douglas Mental Health University Institute, McGill University, Montreal, Canada.; Departments of Psychiatry and Biological and Biomedical Engineering, McGill University, Montreal, Canada., Yassa MA; Department of Neurobiology and Behavior, University of California Irvine, Irvine, USA.; Department of Neurology, University of California Irvine, Irvine, USA., Yushkevich PA; Penn Image Computing and Science Laboratory, Department of Radiology, University of Pennsylvania, Philadelphia, USA., la Joie R; INSERM U1077, Université de Caen Normandie, UMR-S1077, Ecole Pratique des Hautes Etudes, Centre Hospitalier Universitaire de Caen, Caen, France.

Publikováno v: Hippocampus [Hippocampus] 2017 Jan; Vol. 27 (1), pp. 3-11. Date of Electronic Publication: 2016 Nov 15.

Automatic segmentation of the hippocampus for preterm neonates from early-in-life to term-equivalent age.

Autor: Guo T; Neurosciences and Mental Health, The Hospital for Sick Children Research Institute, Toronto, ON, Canada; Department of Paediatrics, The Hospital for Sick Children and the University of Toronto, Toronto, ON, Canada., Winterburn JL; Institute of Biomedical Engineering, University of Toronto, Toronto, ON, Canada; Kimel Family Translational Imaging, Genetics Research Laboratory, Research Imaging Centre, Centre for Addiction and Mental Health, Toronto, Canada., Pipitone J; Institute of Medical Science, University of Toronto, Toronto, ON, Canada; Kimel Family Translational Imaging, Genetics Research Laboratory, Research Imaging Centre, Centre for Addiction and Mental Health, Toronto, Canada., Duerden EG; Neurosciences and Mental Health, The Hospital for Sick Children Research Institute, Toronto, ON, Canada; Department of Paediatrics, The Hospital for Sick Children and the University of Toronto, Toronto, ON, Canada., Park MT; Schulich School of Medicine and Dentistry, Western University, London, ON, Canada; Cerebral Imaging Centre, Douglas Mental Health Research Institute, Verdun, QC, Canada., Chau V; Neurosciences and Mental Health, The Hospital for Sick Children Research Institute, Toronto, ON, Canada; Department of Paediatrics, The Hospital for Sick Children and the University of Toronto, Toronto, ON, Canada., Poskitt KJ; Department of Pediatrics, University of British Columbia and Child and Family Research Institute, Vancouver, BC, Canada., Grunau RE; Department of Pediatrics, University of British Columbia and Child and Family Research Institute, Vancouver, BC, Canada., Synnes A; Department of Pediatrics, University of British Columbia and Child and Family Research Institute, Vancouver, BC, Canada., Miller SP; Neurosciences and Mental Health, The Hospital for Sick Children Research Institute, Toronto, ON, Canada; Department of Paediatrics, The Hospital for Sick Children and the University of Toronto, Toronto, ON, Canada., Mallar Chakravarty M; Institute of Biomedical Engineering, University of Toronto, Toronto, ON, Canada; Cerebral Imaging Centre, Douglas Mental Health Research Institute, Verdun, QC, Canada; Department of Psychiatry, McGill University, Montreal, QC, Canada.

Publikováno v: NeuroImage. Clinical [Neuroimage Clin] 2015 Aug 24; Vol. 9, pp. 176-93. Date of Electronic Publication: 2015 Aug 24 (Print Publication: 2015).

Quantitative comparison of 21 protocols for labeling hippocampal subfields and parahippocampal subregions in in vivo MRI: towards a harmonized segmentation protocol.

Autor: Yushkevich PA; Penn Image Computing and Science Laboratory, Department of Radiology, University of Pennsylvania, USA. Electronic address: pauly2@upenn.edu., Amaral RS; Cerebral Imaging Centre, Douglas Mental Health University Institute, McGill University, Canada., Augustinack JC; A.A. Martinos Center for Biomedical Imaging, Department of Radiology, Harvard Medical School, Massachusetts General Hospital, USA., Bender AR; Institute of Gerontology, Wayne State University, USA., Bernstein JD; Department of Neurology and Neurological Sciences, Stanford University School of Medicine, USA; Stanford Center for Memory Disorders, USA., Boccardi M; LENITEM (Laboratory of Epidemiology, Neuroimaging and Telemedicine), IRCCS Centro S. Giovanni di Dio Fatebenefratelli, Italy., Bocchetta M; LENITEM (Laboratory of Epidemiology, Neuroimaging and Telemedicine), IRCCS Centro S. Giovanni di Dio Fatebenefratelli, Italy; Department of Molecular and Translational Medicine, University of Brescia, Brescia, Italy., Burggren AC; Department of Psychiatry and Biobehavioral Sciences, University of California, Los Angeles, USA., Carr VA; Department of Psychology, Stanford University, USA., Chakravarty MM; Cerebral Imaging Centre, Douglas Mental Health University Institute, McGill University, Canada; Department of Psychiatry, Department of Biomedical Engineering, McGill University, Canada., Chételat G; INSERM U1077, Universitè de Caen Basse-Normandie, UMR-S1077, Ecole Pratique des Hautes Etudes, CHU de Caen, U1077, Caen, France., Daugherty AM; Institute of Gerontology, Wayne State University, USA; Psychology Department, Wayne State University, USA., Davachi L; Department of Psychology, New York University, USA; Center for Neural Science, New York University, USA., Ding SL; Allen Institute for Brain Science, USA., Ekstrom A; Center for Neuroscience, University of California, Davis, USA; Department of Psychology, University of California, Davis, USA., Geerlings MI; Julius Center for Health Sciences and Primary Care, University Medical Center Utrecht, Netherlands., Hassan A; Center for Neuroscience, University of California, Davis, USA., Huang Y; Department of Biomedical Engineering, University of Alberta, Edmonton, Alberta, Canada., Iglesias JE; A.A. Martinos Center for Biomedical Imaging, Department of Radiology, Harvard Medical School, Massachusetts General Hospital, USA; Basque Center on Cognition, Brain and Language (BCBL), Donostia-San Sebastian, Spain., La Joie R; INSERM U1077, Universitè de Caen Basse-Normandie, UMR-S1077, Ecole Pratique des Hautes Etudes, CHU de Caen, U1077, Caen, France., Kerchner GA; Department of Neurology and Neurological Sciences, Stanford University School of Medicine, USA; Stanford Center for Memory Disorders, USA., LaRocque KF; Department of Psychology, Stanford University, USA., Libby LA; Center for Neuroscience, University of California, Davis, USA., Malykhin N; Department of Biomedical Engineering, University of Alberta, Edmonton, Alberta, Canada; Centre for Neuroscience, University of Alberta, Edmonton, Alberta, Canada., Mueller SG; Department of Radiology, University of California, San Francisco, USA; Center for Imaging of Neurodegenerative Diseases, San Francisco VA Medical Center, USA., Olsen RK; Rotman Research Institute, Baycrest, Canada., Palombo DJ; VA Boston Healthcare System, USA., Parekh MB; Department of Radiology, Stanford University, USA., Pluta JB; Penn Image Computing and Science Laboratory, Department of Radiology, University of Pennsylvania, USA; Department of Biostatistics, University of Pennsylvania, USA., Preston AR; Department of Psychology, The University of Texas at Austin, USA; Center for Learning and Memory, The University of Texas at Austin, USA; Department of Neuroscience, The University of Texas at Austin, USA., Pruessner JC; McGill Centre for Studies in Aging, Faculty of Medicine, McGill University, Canada; Department of Psychology, McGill University, Canada., Ranganath C; Department of Psychology, University of California, Davis, USA; Center for Neuroscience, University of California, Davis, USA., Raz N; Institute of Gerontology, Wayne State University, USA; Psychology Department, Wayne State University, USA., Schlichting ML; Department of Psychology, The University of Texas at Austin, USA; Center for Learning and Memory, The University of Texas at Austin, USA., Schoemaker D; McGill Centre for Studies in Aging, Faculty of Medicine, McGill University, Canada; Department of Psychology, McGill University, Canada., Singh S; Department of Psychiatry and Behavioral Sciences, Northwestern University Feinberg School of Medicine, USA., Stark CE; Department of Neurobiology and Behavior, University of California, Irvine, USA., Suthana N; Department of Neurosurgery, University of California, Los Angeles, USA., Tompary A; Department of Psychology, New York University, USA., Turowski MM; Department of Psychiatry and Behavioral Sciences, Northwestern University Feinberg School of Medicine, USA., Van Leemput K; A.A. Martinos Center for Biomedical Imaging, Department of Radiology, Harvard Medical School, Massachusetts General Hospital, USA; Department of Applied Mathematics and Computer Science, Technical University of Denmark, Denmark., Wagner AD; Department of Psychology, Stanford University, USA; Neurosciences Program, Stanford University, USA., Wang L; Department of Psychiatry and Behavioral Sciences, Northwestern University Feinberg School of Medicine, USA; Department of Radiology, Northwestern University Feinberg School of Medicine, USA., Winterburn JL; Cerebral Imaging Centre, Douglas Mental Health University Institute, McGill University, Canada., Wisse LE; Julius Center for Health Sciences and Primary Care, University Medical Center Utrecht, Netherlands., Yassa MA; Department of Neurobiology and Behavior, University of California, Irvine, USA., Zeineh MM; Department of Radiology, Stanford University, USA.

Publikováno v: NeuroImage [Neuroimage] 2015 May 01; Vol. 111, pp. 526-41. Date of Electronic Publication: 2015 Jan 14.

A novel in vivo atlas of human hippocampal subfields using high-resolution 3 T magnetic resonance imaging.

Autor: Winterburn JL; Kimel Family Translational Imaging Genetics Research Laboratory, Research Imaging Centre, Centre for Addiction and Mental Health, Toronto, Canada. winterburn.julie@gmail.com, Pruessner JC, Chavez S, Schira MM, Lobaugh NJ, Voineskos AN, Chakravarty MM

Publikováno v: NeuroImage [Neuroimage] 2013 Jul 01; Vol. 74, pp. 254-65. Date of Electronic Publication: 2013 Feb 13.