Výsledky vyhledávání - "William B, Whitman"

Akademický článek

Autor: William B. Whitman, Maria Chuvochina, Brian P. Hedlund, Konstantinos T. Konstantinidis, Marike Palmer, Luis M. Rodriguez‐R, Iain Sutcliffe, Fengping Wang

Publikováno v: mLife, Vol 3, Iss 1, Pp 1-13 (2024)

Abstract The SeqCode, formally called the Code of Nomenclature of Prokaryotes Described from Sequence Data, is a new code of nomenclature in which genome sequences are the nomenclatural types for the names of prokaryotic species. While similar to the

Externí odkaz: https://doaj.org/article/1c192a1b0d29457c9e94fc3a05080c8d

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Akademický článek

Expression of divergent methyl/alkyl coenzyme M reductases from uncultured archaea

Autor: Nana Shao, Yu Fan, Chau-Wen Chou, Shadi Yavari, Robert V. Williams, I. Jonathan Amster, Stuart M. Brown, Ian J. Drake, Evert C. Duin, William B. Whitman, Yuchen Liu

Publikováno v: Communications Biology, Vol 5, Iss 1, Pp 1-11 (2022)

A heterologous protein expression platform in a culturable methanogen Methanococcus maripaludis is developed to study the methyl-coenzyme M reductase from uncultured archaea.

Externí odkaz: https://doaj.org/article/bb2062aca74f47a48f99ab354429f323

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Akademický článek

Genetic and metabolic engineering of Methanococcus spp

Autor: Jie Li, Taiwo S. Akinyemi, Nana Shao, Can Chen, Xiuzhu Dong, Yuchen Liu, William B. Whitman

Publikováno v: Current Research in Biotechnology, Vol 5, Iss , Pp 100115- (2023)

Methanococcus is a genus of well-characterized mesophilic and hydrogenotrophic methanogens with a robust genetic system. Commonly found in tidal marshes, they compete with sulfate- and iron-reducing bacteria for hydrogen gas (H2) and formate, their t

Externí odkaz: https://doaj.org/article/83f815081d354867b2c0ed776d58056d

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Akademický článek

Oxidative Stress Regulates a Pivotal Metabolic Switch in Dimethylsulfoniopropionate Degradation by the Marine Bacterium Ruegeria pomeroyi

Autor: Tao Wang, Qiuyuan Huang, Andrew S. Burns, Mary Ann Moran, William B. Whitman

Publikováno v: Microbiology Spectrum, Vol 10, Iss 6 (2022)

ABSTRACT Dimethylsulfoniopropionate (DMSP) is an abundant organic compound in marine surface water and source of dimethyl sulfide (DMS), the largest natural sulfur source to the upper atmosphere. Marine bacteria either mineralize DMSP through the dem

Externí odkaz: https://doaj.org/article/4f1d1aaf054144608ab74473f3208893

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Ecological divergence of syntopic marine bacterial species is shaped by gene content and expression

Autor: Brent Nowinski, Xiaoyuan Feng, Christina M. Preston, James M. Birch, Haiwei Luo, William B. Whitman, Mary Ann Moran

Publikováno v: The ISME Journal. 17:813-822

Identifying mechanisms by which bacterial species evolve and maintain genomic diversity is particularly challenging for the uncultured lineages that dominate the surface ocean. A longitudinal analysis of bacterial genes, genomes, and transcripts duri

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_________::74b8b7cbaf5aaefaca8cf76002437dc5
https://doi.org/10.1038/s41396-023-01390-4

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Akademický článek

Genomic Metrics Applied to Rhizobiales (Hyphomicrobiales): Species Reclassification, Identification of Unauthentic Genomes and False Type Strains

Autor: Camila Gazolla Volpiano, Fernando Hayashi Sant’Anna, Adriana Ambrosini, Jackson Freitas Brilhante de São José, Anelise Beneduzi, William B. Whitman, Emanuel Maltempi de Souza, Bruno Brito Lisboa, Luciano Kayser Vargas, Luciane Maria Pereira Passaglia

Publikováno v: Frontiers in Microbiology, Vol 12 (2021)

Taxonomic decisions within the order Rhizobiales have relied heavily on the interpretations of highly conserved 16S rRNA sequences and DNA–DNA hybridizations (DDH). Currently, bacterial species are defined as including strains that present 95–96%

Externí odkaz: https://doaj.org/article/015b7bd6db1f4b7faadaaecf22140980

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Akademický článek

Dimethylsulfoniopropionate Sulfur and Methyl Carbon Assimilation in Ruegeria Species

Autor: Joseph S. Wirth, Tao Wang, Qiuyuan Huang, Robert H. White, William B. Whitman

Publikováno v: mBio, Vol 11, Iss 2 (2020)

ABSTRACT Dimethylsulfoniopropionate (DMSP) is abundant in marine environments and an important source of reduced carbon and sulfur for marine bacteria. While both Ruegeria pomeroyi and Ruegeria lacuscaerulensis possessed genes encoding the DMSP demet

Externí odkaz: https://doaj.org/article/f8e5f34321164ab6a1074cbbeb44ffc5

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Akademický článek

Draft genome of Rosenbergiella nectarea strain 8N4T provides insights into the potential role of this species in its plant host

Autor: Sivan Laviad-Shitrit, Ido Izhaki, William B. Whitman, Nicole Shapiro, Tanja Woyke, Nikos C. Kyrpides, Malka Halpern

Publikováno v: PeerJ, Vol 8, p e8822 (2020)

Background Rosenbergiella nectarea strain 8N4T, the type species of the genus Rosenbergiella, was isolated from Amygdalus communis (almond) floral nectar. Other strains of this species were isolated from the floral nectar of Citrus paradisi (grapefru

Externí odkaz: https://doaj.org/article/3cb666bf2c2a4e74bde5a296629930a3

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Akademický článek

Draft genome sequences of Bradyrhizobium shewense sp. nov. ERR11T and Bradyrhizobium yuanmingense CCBAU 10071T

Autor: Aregu Amsalu Aserse, Tanja Woyke, Nikos C. Kyrpides, William B. Whitman, Kristina Lindström

Publikováno v: Standards in Genomic Sciences, Vol 12, Iss 1, Pp 1-14 (2017)

Abstract The type strain of the prospective Bradyrhizobium shewense sp. nov. ERR11T, was isolated from a nodule of the leguminous tree Erythrina brucei native to Ethiopia. The type strain Bradyrhizobium yuanmingense CCBAU 10071 T, was isolated from t

Externí odkaz: https://doaj.org/article/5f8c1b3444ea48d09d19808bce6a61ac

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