Gut Microbiome in Human Melioidosis: Composition and Resistome Dynamics from Diagnosis to Discovery.

Autor: Chowdhury S; Department of Microbiology, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal 576104, Karnataka, India.; Center of Emerging and Tropical Diseases (CETD), Manipal Academy of Higher Education, Manipal 576104, Karnataka, India., Kullberg RFJ; Center for Experimental and Molecular Medicine, Amsterdam University Medical Center, University of Amsterdam, Amsterdam, The Netherlands., Haak BW; Center for Experimental and Molecular Medicine, Amsterdam University Medical Center, University of Amsterdam, Amsterdam, The Netherlands.; Host-Microbiota Interactions Laboratory, Wellcome Sanger Institute, Wellcome Genome Campus, Hinxton, United Kingdom., Duran C; Host-Microbiota Interactions Laboratory, Wellcome Sanger Institute, Wellcome Genome Campus, Hinxton, United Kingdom., Earny VA; Department of Microbiology, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal 576104, Karnataka, India.; Center of Emerging and Tropical Diseases (CETD), Manipal Academy of Higher Education, Manipal 576104, Karnataka, India., Eshwara VK; Department of Microbiology, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal 576104, Karnataka, India.; Center of Emerging and Tropical Diseases (CETD), Manipal Academy of Higher Education, Manipal 576104, Karnataka, India.; Center for Antimicrobial Resistance and Education (CARE), Manipal Academy of Higher Education, Manipal 576104, Karnataka, India., Lawley TD; Host-Microbiota Interactions Laboratory, Wellcome Sanger Institute, Wellcome Genome Campus, Hinxton, United Kingdom., Wiersinga WJ; Center for Experimental and Molecular Medicine, Amsterdam University Medical Center, University of Amsterdam, Amsterdam, The Netherlands.; Division of Infectious Diseases, Department of Internal Medicine, Amsterdam University Medical Center, Amsterdam, The Netherlands., Mukhopadhyay C; Department of Microbiology, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal 576104, Karnataka, India.; Center of Emerging and Tropical Diseases (CETD), Manipal Academy of Higher Education, Manipal 576104, Karnataka, India.; Center for Antimicrobial Resistance and Education (CARE), Manipal Academy of Higher Education, Manipal 576104, Karnataka, India.

Publikováno v: Open forum infectious diseases [Open Forum Infect Dis] 2024 Nov 05; Vol. 11 (11), pp. ofae654. Date of Electronic Publication: 2024 Nov 05 (Print Publication: 2024).

A Robust Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2)-Specific T- and B-Cell Response Is Associated With Early Viral Clearance in SARS-CoV-2 Omicron-Infected Immunocompromised Individuals.

Autor: Vergouwe M; Center for Experimental and Molecular Medicine, Amsterdam University Medical Center, location AMC, University of Amsterdam, Amsterdam, The Netherlans.; Amsterdam institute for Infection and Immunity, Infectious Diseases., Biemond JJ; Center for Experimental and Molecular Medicine, Amsterdam University Medical Center, location AMC, University of Amsterdam, Amsterdam, The Netherlans.; Amsterdam institute for Infection and Immunity, Infectious Diseases., van der Straten K; Amsterdam institute for Infection and Immunity, Infectious Diseases.; Department of Medical Microbiology and Infection Prevention, Amsterdam University Medical Center, University of Amsterdam, Amsterdam, The Netherlands.; Division of Infectious Diseases, Department of Medicine, Amsterdam University Medical Center, University of Amsterdam, Amsterdam, The Netherlands., van Pul L; Amsterdam institute for Infection and Immunity, Infectious Diseases.; Department of Experimental Immunology, Amsterdam University Medical Center, University of Amsterdam, Amsterdam, The Netherlands., Kerster G; Amsterdam institute for Infection and Immunity, Infectious Diseases.; Department of Medical Microbiology and Infection Prevention, Amsterdam University Medical Center, University of Amsterdam, Amsterdam, The Netherlands., Claireaux M; Amsterdam institute for Infection and Immunity, Infectious Diseases.; Department of Medical Microbiology and Infection Prevention, Amsterdam University Medical Center, University of Amsterdam, Amsterdam, The Netherlands., Burger JA; Amsterdam institute for Infection and Immunity, Infectious Diseases.; Department of Medical Microbiology and Infection Prevention, Amsterdam University Medical Center, University of Amsterdam, Amsterdam, The Netherlands., van Dort KA; Amsterdam institute for Infection and Immunity, Infectious Diseases.; Department of Experimental Immunology, Amsterdam University Medical Center, University of Amsterdam, Amsterdam, The Netherlands., Kootstra NA; Amsterdam institute for Infection and Immunity, Infectious Diseases.; Department of Experimental Immunology, Amsterdam University Medical Center, University of Amsterdam, Amsterdam, The Netherlands., Jonges M; Department of Medical Microbiology and Infection Prevention, Amsterdam University Medical Center, University of Amsterdam, Amsterdam, The Netherlands., Welkers MRA; Department of Medical Microbiology and Infection Prevention, Amsterdam University Medical Center, University of Amsterdam, Amsterdam, The Netherlands., Hazenberg MD; Amsterdam institute for Infection and Immunity, Infectious Diseases.; Department of Hematology, Amsterdam University Medical Center, University of Amsterdam, Amsterdam, The Netherlands.; Department of Hematopoiesis, Sanquin Research, Amsterdam, The Netherlands., Peters-Sengers H; Center for Experimental and Molecular Medicine, Amsterdam University Medical Center, location AMC, University of Amsterdam, Amsterdam, The Netherlans., van Gils MJ; Amsterdam institute for Infection and Immunity, Infectious Diseases.; Department of Medical Microbiology and Infection Prevention, Amsterdam University Medical Center, University of Amsterdam, Amsterdam, The Netherlands., Wiersinga WJ; Center for Experimental and Molecular Medicine, Amsterdam University Medical Center, location AMC, University of Amsterdam, Amsterdam, The Netherlans.; Amsterdam institute for Infection and Immunity, Infectious Diseases.; Division of Infectious Diseases, Department of Medicine, Amsterdam University Medical Center, University of Amsterdam, Amsterdam, The Netherlands., Birnie E; Center for Experimental and Molecular Medicine, Amsterdam University Medical Center, location AMC, University of Amsterdam, Amsterdam, The Netherlans.; Amsterdam institute for Infection and Immunity, Infectious Diseases.; Division of Infectious Diseases, Department of Medicine, Amsterdam University Medical Center, University of Amsterdam, Amsterdam, The Netherlands., de Bree GJ; Amsterdam institute for Infection and Immunity, Infectious Diseases.; Division of Infectious Diseases, Department of Medicine, Amsterdam University Medical Center, University of Amsterdam, Amsterdam, The Netherlands.

Publikováno v: The Journal of infectious diseases [J Infect Dis] 2024 Oct 16; Vol. 230 (4), pp. e860-e871.

Unraveling Sepsis Epidemiology in a Low- and Middle-Income Intensive Care Setting Reveals the Alarming Burden of Tropical Infections and Antimicrobial Resistance: A Prospective Observational Study (MARS-India).

Autor: Virk HS; Center for Experimental and Molecular Medicine (CEMM), Amsterdam UMC, University of Amsterdam, Amsterdam, The Netherlands.; Department of Microbiology, Queen Alexandra Hospital, Portsmouth Hospitals University NHS Trust, Portsmouth, United Kingdom., Biemond JJ; Center for Experimental and Molecular Medicine (CEMM), Amsterdam UMC, University of Amsterdam, Amsterdam, The Netherlands., Earny VA; Department of Microbiology, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, Karnataka, India-576104.; Center for Emerging and Tropical Diseases (CETD), Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, Karnataka, India-576104., Chowdhury S; Department of Microbiology, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, Karnataka, India-576104.; Center for Emerging and Tropical Diseases (CETD), Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, Karnataka, India-576104., Frölke RI; Center for Experimental and Molecular Medicine (CEMM), Amsterdam UMC, University of Amsterdam, Amsterdam, The Netherlands., Khanna S; Allo Health, Bengaluru, Karnataka, India., Shanbhag V; Department of Critical Care, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, Karnataka, India-576104., Rao S; Department of Critical Care, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, Karnataka, India-576104., Acharya RV; Department of Medicine, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, Karnataka, India-576104., Balakrishnan JM; Department of Emergency Medicine, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, Karnataka, India-576104., Eshwara VK; Department of Microbiology, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, Karnataka, India-576104.; Center for Emerging and Tropical Diseases (CETD), Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, Karnataka, India-576104., Varma M; Department of Infectious Diseases, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, Karnataka, India-576104., van der Poll T; Center for Experimental and Molecular Medicine (CEMM), Amsterdam UMC, University of Amsterdam, Amsterdam, The Netherlands.; Department of Internal Medicine, Division of Infectious Diseases, Amsterdam UMC, University of Amsterdam, Amsterdam, The Netherlands., Wiersinga WJ; Center for Experimental and Molecular Medicine (CEMM), Amsterdam UMC, University of Amsterdam, Amsterdam, The Netherlands.; Department of Internal Medicine, Division of Infectious Diseases, Amsterdam UMC, University of Amsterdam, Amsterdam, The Netherlands., Mukhopadhyay C; Department of Microbiology, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, Karnataka, India-576104.; Center for Emerging and Tropical Diseases (CETD), Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, Karnataka, India-576104.

Publikováno v: Clinical infectious diseases : an official publication of the Infectious Diseases Society of America [Clin Infect Dis] 2024 Oct 01. Date of Electronic Publication: 2024 Oct 01.

Association between butyrate-producing gut bacteria and the risk of infectious disease hospitalisation: results from two observational, population-based microbiome studies.

Autor: Kullberg RFJ; Center for Experimental and Molecular Medicine, Amsterdam UMC, University of Amsterdam, Amsterdam, Netherlands. Electronic address: r.f.j.kullberg@amsterdamumc.nl., Wikki I; Division of Medicine, Turku University Hospital and University of Turku, Turku, Finland., Haak BW; Center for Experimental and Molecular Medicine, Amsterdam UMC, University of Amsterdam, Amsterdam, Netherlands., Kauko A; Division of Medicine, Turku University Hospital and University of Turku, Turku, Finland., Galenkamp H; Department of Public and Occupational Health, Amsterdam UMC, University of Amsterdam, Amsterdam, Netherlands., Peters-Sengers H; Center for Experimental and Molecular Medicine, Amsterdam UMC, University of Amsterdam, Amsterdam, Netherlands; Department of Epidemiology and Data Science, Amsterdam UMC, Vrije Universiteit Amsterdam, Amsterdam, Netherlands., Butler JM; Center for Experimental and Molecular Medicine, Amsterdam UMC, University of Amsterdam, Amsterdam, Netherlands., Havulinna AS; Department of Public Health and Welfare, Finnish Institute for Health and Welfare, Helsinki, Finland; Institute for Molecular Medicine Finland, FIMM-HiLIFE, Finland., Palmu J; Division of Medicine, Turku University Hospital and University of Turku, Turku, Finland; Department of Public Health and Welfare, Finnish Institute for Health and Welfare, Helsinki, Finland., McDonald D; Department of Pediatrics, University of California San Diego, San Diego, CA, USA., Benchraka C; Department of Computing, University of Turku, Turku, Finland., Abdel-Aziz MI; Department of Pulmonary Medicine, Amsterdam UMC, University of Amsterdam, Amsterdam, Netherlands., Prins M; Department of Infectious Diseases, Public Health Service of Amsterdam, Amsterdam, Netherlands; Department of Internal Medicine, Division of Infectious Diseases, Amsterdam UMC, University of Amsterdam, Amsterdam, Netherlands., Maitland van der Zee AH; Department of Pulmonary Medicine, Amsterdam UMC, University of Amsterdam, Amsterdam, Netherlands., van den Born BJ; Department of Public and Occupational Health, Amsterdam UMC, University of Amsterdam, Amsterdam, Netherlands; Department of Internal Medicine, Division of Vascular Medicine, Amsterdam UMC, University of Amsterdam, Amsterdam, Netherlands., Jousilahti P; Department of Public Health and Welfare, Finnish Institute for Health and Welfare, Helsinki, Finland., de Vos WM; Laboratory of Microbiology, Wageningen University, Wageningen, Netherlands; Human Microbiome Research Program, Faculty of Medicine, University of Helsinki, Helsinki, Finland., Salomaa V; Department of Public Health and Welfare, Finnish Institute for Health and Welfare, Helsinki, Finland., Knight R; Department of Pediatrics, University of California San Diego, San Diego, CA, USA., Lahti L; Department of Computing, University of Turku, Turku, Finland., Nieuwdorp M; Department of Internal Medicine, Division of Vascular Medicine, Amsterdam UMC, University of Amsterdam, Amsterdam, Netherlands., Niiranen T; Division of Medicine, Turku University Hospital and University of Turku, Turku, Finland; Department of Public Health and Welfare, Finnish Institute for Health and Welfare, Helsinki, Finland., Wiersinga WJ; Center for Experimental and Molecular Medicine, Amsterdam UMC, University of Amsterdam, Amsterdam, Netherlands; Department of Internal Medicine, Division of Infectious Diseases, Amsterdam UMC, University of Amsterdam, Amsterdam, Netherlands.

Publikováno v: The Lancet. Microbe [Lancet Microbe] 2024 Sep; Vol. 5 (9), pp. 100864. Date of Electronic Publication: 2024 Jun 20.

Dysregulation of Host-Pathogen Interactions in Sepsis: Host-Related Factors.

Autor: Joosten SCM; Centre for Experimental and Molecular Medicine, Amsterdam University Medical Center, Amsterdam, The Netherlands., Wiersinga WJ; Centre for Experimental and Molecular Medicine, Amsterdam University Medical Center, Amsterdam, The Netherlands.; Division of Infectious Diseases, Amsterdam University Medical Center, Amsterdam, The Netherlands., Poll TV; Centre for Experimental and Molecular Medicine, Amsterdam University Medical Center, Amsterdam, The Netherlands.; Division of Infectious Diseases, Amsterdam University Medical Center, Amsterdam, The Netherlands.

Publikováno v: Seminars in respiratory and critical care medicine [Semin Respir Crit Care Med] 2024 Aug; Vol. 45 (4), pp. 469-478. Date of Electronic Publication: 2024 Jul 01.