Reproducible bioinformatics workflows: A case study with software containers and interactive notebooks

Autor: Eggert, Anja, Westermark, Pål Olof

Publikováno v: 65th Annual Meeting of the German Association for Medical Informatics, Biometry and Epidemiology (GMDS), Meeting of the Central European Network (CEN: German Region, Austro-Swiss Region and Polish Region) of the International Biometric Society (IBS); 20200906-20200909; Berlin; DOCAbstr. 374 /20210226/

Background: Reproducible specification of workflows in bioinformatics is challenging given their complexity. We developed a new statistical method in the field of circadian rhythmicity, which allows to rigorously determine whether measured quantities

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::021e209caee5c0f80bad203ef60b2154

Additional file 4 of Seagull: lasso, group lasso and sparse-group lasso regularization for linear regression models via proximal gradient descent

Autor: Klosa, Jan, Simon, Noah, Westermark, Pål Olof, Liebscher, Volkmar, Wittenburg, Dörte

Additional file 4. A document with information about proximal gradient descent for the sparse-group lasso.

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::eb68d556bce86150f8b19dd67a74b719