Zobrazeno 1 - 10
of 12
pro vyhledávání: '"Wes Warren"'
Autor:
Jonathan B. Puritz, Ximing Guo, Matt Hare, Yan He, LaDeana Hillier, Shubo Jin, Ming Liu, Katie Lotterhos, Pat Minx, Tejashree Modak, Dina Proestou, Edward S. Rice, Chad Tomlinson, Wes Warren, Erin Witkop, Honggang Zhao, Marta Gomez-Chiarri
Genome assembly can be challenging for species that are characterized by high amounts of polymorphism, heterozygosity, and large effective population sizes. High levels of heterozygosity can result in genome mis-assemblies and a larger than expected
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::2d4a41583ee06a6d42e4285fba847b56
https://doi.org/10.1101/2022.08.29.505626
https://doi.org/10.1101/2022.08.29.505626
Autor:
Ronald B. Walter, Yuan Lu, Manfred Schartl, William T. Boswell, Wes Warren, Mikki Boswell, Taryn J. Olivas
Publikováno v:
Frontiers in Genetics
Frontiers in Genetics, Vol 11 (2020)
Frontiers in Genetics, Vol 11 (2020)
Xiphophorus interspecies hybrids represent a valuable model system to study heritable tumorigenesis, and the only model system that exhibits both spontaneous and inducible tumors. Types of tumorigenesis depend on the specific pedigree of the parental
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::8b90243c19896694c7b4bc43c61dc466
Autor:
Nolan G. Ericson, Mouadh Barbirou, Amanda Miller, Yariswamy Manjunath, Guangfu Li, Wes Warren, Peter J. Tonellato, Jussuf T. Kaifi, Kevin F. Staveley-O’Carroll, Arturo Ramirez
Publikováno v:
Cancer Research. 81:596-596
Purpose: Circulating tumor cells (CTCs) may be novel biomarkers to predict cancer prognosis and monitor therapeutic efficacy. In the current study, we investigated the use of the time-dependent enumeration and targeted DNA sequensing of single CTCs a
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::e779b339a656f6c61ab6eac29b9f6af8
https://doi.org/10.1158/1538-7445.am2021-596
https://doi.org/10.1158/1538-7445.am2021-596
Autor:
Evan E. Eichler, Kendra Hoekzema, Matthew Boitano, Katherine M. Munson, Tina A. Graves-Lindsay, Zev N. Kronenberg, Mark Chaisson, Chen-Shin Chin, Karyn Meltz Steinberg, Paul Peluso, David Gordon, Wes Warren, Richard K. Wilson, Laura Vives, Jonas Korlach, John Huddleston
Publikováno v:
Genome Research. 27:677-685
In an effort to more fully understand the full spectrum of human genetic variation, we generated deep single-molecule, real-time (SMRT) sequencing data from two haploid human genomes. By using an assembly-based approach (SMRT-SV), we systematically a
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::aded1309b740a9e37d8dcb66ff0450a4
https://doi.org/10.1101/gr.214007.116
https://doi.org/10.1101/gr.214007.116
Autor:
Alain Vignal, Noémie Thébault, Simon Boitard, Valentine Yapi-Gnaore, Issaka Youssao, Michele Tixier-Boichard, Wes Warren, Xavier Rognon
Publikováno v:
HAL
National audience
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=dedup_wf_001::53c763281d8432fc61bd199f8a400213
https://hal.inrae.fr/hal-02785442
https://hal.inrae.fr/hal-02785442
Autor:
Julian M. Catchen, Angel Amores, Wes Warren, Manfred Schartl, Ion Beldorth, Ziping Zhang, Ronald B. Walter, Jonathan R. Wagner, John H. Postlethwait, Tzintzuni Garcia, Yingjia Shen
Publikováno v:
Comparative Biochemistry and Physiology Part C: Toxicology & Pharmacology. 155:102-108
Variations in gene expression are essential for the evolution of novel phenotypes and for speciation. Studying allelic specific gene expression (ASGE) within interspecies hybrids provides a unique opportunity to reveal underlying mechanisms of geneti
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::a94e34ec91f08bb849ffff620fdb4fc7
https://doi.org/10.1016/j.cbpc.2011.03.012
https://doi.org/10.1016/j.cbpc.2011.03.012
Autor:
Jonas Korlach, Wes Warren, Chen-Shin Chin, Matthew Boitano, Zev N. Kronenberg, Karyn Meltz Steinberg, Katherine M. Munson, David Gordon, Paul Peluso, Mark Chaisson, Rick K. Wilson, Tina A. Graves-Lindsay, Kendra Hoekzema, John Huddleston, Evan E. Eichler, Laura Vives
Publikováno v:
Genome Research. 28:144-144
In an effort to more fully understand the full spectrum of human genetic variation, we generated deep single-molecule, real-time (SMRT) sequencing data from two haploid human genomes. By using an assembly-based approach (SMRT-SV), we systematically a
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::5f7f13e1461eaafd97fb2e24227ed543
https://doi.org/10.1101/gr.233007.117
https://doi.org/10.1101/gr.233007.117
Autor:
Willem Rens, Daniel McMillan, Tina Graves, Frank Grützner, Colin Kremitzki, Camilla M. Whittington, Frédéric Veyrunes, Kyriena Schatzkamer, Wes Warren, Janine E. Deakin, Jennifer A. Marshall Graves, Amber E. Alsop, Paul D. Waters, Pat Miethke, Malcolm A. Ferguson-Smith
Publikováno v:
Genome Research. 18:965-973
In mammals, with a few notable exceptions, sex is determined by an XX female:XY male sex chromosome system in which the Y chromosome bears the male-dominant testis-determining gene SRY. The X chromosome of most placental mammals has a virtually ident
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::4cb2ce0a7d3743da4e1fdab8ebe09ae8
https://doi.org/10.1101/gr.7101908
https://doi.org/10.1101/gr.7101908
Autor:
Yingjia Shen, Tzintzuni Garcia, Ronald B. Walter, Wes Warren, Vagmita Pabuwal, Amanda Pasquali, William A. Cresko, Mikki Boswell, Manfred Schartl, Ion Beldorth
In recent years RNA-Seq technology has been used not only to quantify differences in gene expression but also to understand the underlying mechanisms that lead to these differences. Nucleotide sequence variation arising through evolution may differen
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::8b46051b253cb3e54fa2e8bcb58c81e7
https://europepmc.org/articles/PMC3746558/
https://europepmc.org/articles/PMC3746558/
Autor:
Yingjia, Shen, Julian, Catchen, Tzintzuni, Garcia, Angel, Amores, Ion, Beldorth, Jonathan, Wagner, Ziping, Zhang, John, Postlethwait, Wes, Warren, Manfred, Schartl, Ronald B, Walter
Publikováno v:
Comparative biochemistry and physiology. Toxicologypharmacology : CBP. 155(1)
Variations in gene expression are essential for the evolution of novel phenotypes and for speciation. Studying allelic specific gene expression (ASGE) within interspecies hybrids provides a unique opportunity to reveal underlying mechanisms of geneti
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=pmid________::389cd0ae9e7ca862fadf2c443da6d200
https://pubmed.ncbi.nlm.nih.gov/21466860
https://pubmed.ncbi.nlm.nih.gov/21466860