Zobrazeno 1 - 10
of 625
pro vyhledávání: '"Wei‐Hua Chen"'
Autor:
Chuqing Sun, Guoru Hu, Liwen Yi, Wei Ge, Qingyu Yang, Xiangliang Yang, Yifan He, Zhi Liu, Wei-Hua Chen
Publikováno v:
Microbiome, Vol 12, Iss 1, Pp 1-19 (2024)
Abstract Background Our facial skin hosts millions of microorganisms, primarily bacteria, crucial for skin health by maintaining the physical barrier, modulating immune response, and metabolizing bioactive materials. Aging significantly influences th
Externí odkaz:
https://doaj.org/article/67dcf71ba8c44f76b00a45c9a52b43a0
Publikováno v:
Genome Biology, Vol 25, Iss 1, Pp 1-24 (2024)
Abstract Identifying viruses from metagenomes is a common step to explore the virus composition in the human gut. Here, we introduce VirRep, a hybrid language representation learning framework, for identifying viruses from human gut metagenomes. VirR
Externí odkaz:
https://doaj.org/article/341bf682e3ab446b89d916387f132077
Publikováno v:
Microbiome, Vol 12, Iss 1, Pp 1-15 (2024)
Abstract Background Ruminants are important livestock animals that have a unique digestive system comprising multiple stomach compartments. Despite significant progress in the study of microbiome in the gastrointestinal tract (GIT) sites of ruminants
Externí odkaz:
https://doaj.org/article/69cc73dac6de440986a199e2d28443c6
Publikováno v:
iMeta, Vol 3, Iss 4, Pp n/a-n/a (2024)
Externí odkaz:
https://doaj.org/article/1bfffb1330ad40baa0c1ac151977d435
Autor:
Jingchao Chen, Chuqing Sun, Yanqi Dong, Menglu Jin, Senying Lai, Longhao Jia, Xueyang Zhao, Huarui Wang, Na L. Gao, Peer Bork, Zhi Liu, Wei‐Hua Chen, Xing‐Ming Zhao
Publikováno v:
Advanced Science, Vol 11, Iss 13, Pp n/a-n/a (2024)
Abstract Current metagenome assembled human gut phage catalogs contained mostly fragmented genomes. Here, comprehensive gut virome detection procedure is developed involving virus‐like particle (VLP) enrichment from ≈500 g feces and combined sequ
Externí odkaz:
https://doaj.org/article/cc966d99f2d342da99020a5b69a66ba1
Autor:
Yanhong Cao, Tong Feng, Yingjian Wu, Yixue Xu, Li Du, Teng Wang, Yuhong Luo, Yan Wang, Zhipeng Li, Zeyi Xuan, Shaomei Chen, Na Yao, Na L. Gao, Qian Xiao, Kongwei Huang, Xiaobo Wang, Kuiqing Cui, Saif ur Rehman, Xiangfang Tang, Dewu Liu, Hongbing Han, Ying Li, Wei-Hua Chen, Qingyou Liu
Publikováno v:
Microbiome, Vol 11, Iss 1, Pp 1-20 (2023)
Abstract Background Goat is an important livestock worldwide, which plays an indispensable role in human life by providing meat, milk, fiber, and pelts. Despite recent significant advances in microbiome studies, a comprehensive survey on the goat mic
Externí odkaz:
https://doaj.org/article/4f049a3983db4c5a8a3f9a7797638c61
Autor:
Senying Lai, Yan Yan, Yanni Pu, Shuchun Lin, Jian-Ge Qiu, Bing-Hua Jiang, Marisa Isabell Keller, Mingyu Wang, Peer Bork, Wei-Hua Chen, Yan Zheng, Xing-Ming Zhao
Publikováno v:
Microbiome, Vol 11, Iss 1, Pp 1-16 (2023)
Abstract Background The fungal component of the human gut microbiome, also known as the mycobiome, plays a vital role in intestinal ecology and human health. However, the overall structure of the gut mycobiome as well as the inter-individual variatio
Externí odkaz:
https://doaj.org/article/32b93a3e464b4f95ac6ffea8aa8284e7
Autor:
Min Li, Jinxin Liu, Jiaying Zhu, Huarui Wang, Chuqing Sun, Na L. Gao, Xing-Ming Zhao, Wei-Hua Chen
Publikováno v:
Gut Microbes, Vol 15, Iss 1 (2023)
ABSTRACTCross-cohort validation is essential for gut-microbiome-based disease stratification but was only performed for limited diseases. Here, we systematically evaluated the cross-cohort performance of gut microbiome-based machine-learning classifi
Externí odkaz:
https://doaj.org/article/893eedf27b8b4a34aa2de4ba300e085c
Autor:
Chuqing Sun, Jingchao Chen, Menglu Jin, Xueyang Zhao, Yun Li, Yanqi Dong, Na Gao, Zhi Liu, Peer Bork, Xing‐Ming Zhao, Wei‐Hua Chen
Publikováno v:
Advanced Science, Vol 10, Iss 25, Pp n/a-n/a (2023)
Abstract DNA methylation plays a crucial role in the survival of bacteriophages (phages), yet the understanding of their genome methylation remains limited. In this study, DNA methylation patterns are analyzed in 8848 metagenome‐assembled high‐qu
Externí odkaz:
https://doaj.org/article/858c8eab8d8047b4a44ea6a4f0c4da7d
Publikováno v:
Genome Biology, Vol 23, Iss 1, Pp 1-21 (2022)
Abstract Evaluating the quality of metagenomic assemblies is important for constructing reliable metagenome-assembled genomes and downstream analyses. Here, we present metaMIC ( https://github.com/ZhaoXM-Lab/metaMIC ), a machine learning-based tool f
Externí odkaz:
https://doaj.org/article/30bd6ac34cd1499da52331576d1d2f7b