Zobrazeno 1 - 10
of 22
pro vyhledávání: '"W. Stephen Pittard"'
Autor:
W Stephen, Pittard, Shuzhao, Li
Publikováno v:
Methods in molecular biology (Clifton, N.J.). 2104
The daily work in data science involves a set of essential tools: the programming languages Python and R, the version control tool Git and the virtualization tool Docker. Proficiency in at least one programming language is required for data science.
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=pmid________::4945c5fb241822d34097e6f360d9bfe8
https://pubmed.ncbi.nlm.nih.gov/31953823
https://pubmed.ncbi.nlm.nih.gov/31953823
Publikováno v:
Methods in molecular biology (Clifton, N.J.). 2104
With the increasing importance of big data in biomedicine, skills in data science are a foundation for the individual career development and for the progress of science. This chapter is a practical guide to working with high-throughput biomedical dat
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=pmid________::2a0b72be9d678206253f343b3c04c63e
https://pubmed.ncbi.nlm.nih.gov/31953822
https://pubmed.ncbi.nlm.nih.gov/31953822
Publikováno v:
Computational Methods and Data Analysis for Metabolomics ISBN: 9781071602386
With the increasing importance of big data in biomedicine, skills in data science are a foundation for the individual career development and for the progress of science. This chapter is a practical guide to working with high-throughput biomedical dat
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::4c2fa44ebebfa22f2bffa3fcd4a59c11
https://doi.org/10.1007/978-1-0716-0239-3_14
https://doi.org/10.1007/978-1-0716-0239-3_14
Autor:
Shuzhao Li, W. Stephen Pittard
Publikováno v:
Computational Methods and Data Analysis for Metabolomics ISBN: 9781071602386
The daily work in data science involves a set of essential tools: the programming languages Python and R, the version control tool Git and the virtualization tool Docker. Proficiency in at least one programming language is required for data science.
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::84e8727ab6dab297eb2a01ac9c9b1d24
https://doi.org/10.1007/978-1-0716-0239-3_15
https://doi.org/10.1007/978-1-0716-0239-3_15
Publikováno v:
Human Molecular Genetics. 19:R131-R136
In this review, we focus on progress that has been made with detecting small insertions and deletions (INDELs) in human genomes. Over the past decade, several million small INDELs have been discovered in human populations and personal genomes. The am
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::a295649895e0e5c2f044baa4edd19a80
https://doi.org/10.1093/hmg/ddq400
https://doi.org/10.1093/hmg/ddq400
Autor:
Ryan E. Mills, Erwin G. Van Meir, W. Stephen Pittard, Rebecca C. Iskow, Scott E. Devine, Paula M. Vertino, Michael T. McCabe, Spencer Torene, Andrew F. Neuwald
Publikováno v:
Cell. 141:1253-1261
SummaryTwo abundant classes of mobile elements, namely Alu and L1 elements, continue to generate new retrotransposon insertions in human genomes. Estimates suggest that these elements have generated millions of new germline insertions in individual h
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::770a940e0986844843d33d64551a9090
https://doi.org/10.1016/j.cell.2010.05.020
https://doi.org/10.1016/j.cell.2010.05.020
Autor:
Scott E. Devine, Rebecca C. Iskow, Christopher T. Luttig, W. Stephen Pittard, Circe Tsui, E. Andrew Bennett, Ryan E. Mills
Publikováno v:
The American Journal of Human Genetics. 78:671-679
Transposable genetic elements are abundant in the genomes of most organisms, including humans. These endogenous mutagens can alter genes, promote genomic rearrangements, and may help to drive the speciation of organisms. In this study, we identified
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::21f7f621e5546f9e54b951e4fa66ce6c
https://doi.org/10.1086/501028
https://doi.org/10.1086/501028
Autor:
Quinlyn A. Soltow, Kim M. Gernert, Karan Uppal, Dean P. Jones, Tianwei Yu, W. Stephen Pittard, Fred Strobel
Publikováno v:
BMC Bioinformatics, Vol 14, Iss 1, p 15 (2013)
BMC Bioinformatics
BMC Bioinformatics
Background Detection of low abundance metabolites is important for de novo mapping of metabolic pathways related to diet, microbiome or environmental exposures. Multiple algorithms are available to extract m/z features from liquid chromatography-mass
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::0f78606b906e983056f41ee5013770f1
http://www.biomedcentral.com/1471-2105/14/15
http://www.biomedcentral.com/1471-2105/14/15
Autor:
Julienne M. Mullaney, Caleb Webber, Umar Farooq, Ryan E. Mills, David M. Kemeza, Anup Mahurkar, Chris P. Ponting, Todd Creasy, W. Stephen Pittard, Scott E. Devine, Daniel S. Strassler
Publikováno v:
Genome research. 21(6)
Human genetic variation is expected to play a central role in personalized medicine. Yet only a fraction of the natural genetic variation that is harbored by humans has been discovered to date. Here we report almost 2 million small insertions and del
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::309483a070a2d47f2b9c59dff7d22718
https://pubmed.ncbi.nlm.nih.gov/21460062
https://pubmed.ncbi.nlm.nih.gov/21460062
Autor:
Scott E. Devine, Circe Tsui, Christine E. Larkins, Adam D. Beauchamp, Ryan E. Mills, Christopher T. Luttig, W. Stephen Pittard
Publikováno v:
Genome research. 16(9)
Although many studies have been conducted to identify single nucleotide polymorphisms (SNPs) in humans, few studies have been conducted to identify alternative forms of natural genetic variation, such as insertion and deletion (INDEL) polymorphisms.
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::521f5fbd534ec951844e4be9064b768b
https://pubmed.ncbi.nlm.nih.gov/16902084
https://pubmed.ncbi.nlm.nih.gov/16902084