Zobrazeno 1 - 10
of 590
pro vyhledávání: '"W. Clauß"'
Autor:
Amy E Bryant, Michael J Aldape, Clifford R Bayer, Eva J Katahira, Laura Bond, Carrie D Nicora, Thomas L Fillmore, Therese R W Clauss, Thomas O Metz, Bobbie-Jo Webb-Robertson, Dennis L Stevens
Publikováno v:
PLoS ONE, Vol 12, Iss 2, p e0172486 (2017)
BACKGROUND:Acute muscle injuries are exceedingly common and non-steroidal anti-inflammatory drugs (NSAIDs) are widely consumed to reduce the associated inflammation, swelling and pain that peak 1-2 days post-injury. While prophylactic use or early ad
Externí odkaz:
https://doaj.org/article/debe4290161745cba72e49bf78a41bbd
Autor:
Rosalie K. Chu, Samuel O. Purvine, Christopher James Burgess, Markus Kleber, David D. Myrold, Therese R. W. Clauss, Eric D. Walter, Nancy M. Washton, Stephany S. Chacon, Patrick N. Reardon
Publikováno v:
Chacon, Stephany S; Reardon, Patrick N; Burgess, Christopher J; Purvine, Samuel; Chu, Rosalie K; Clauss, Therese R; et al.(2019). Mineral Surfaces as Agents of Environmental Proteolysis: Mechanisms and Controls. Environmental Science & Technology, 53(6), 3018-3026. doi: 10.1021/acs.est.8b05583. Lawrence Berkeley National Laboratory: Retrieved from: http://www.escholarship.org/uc/item/0dp5386b
Environmental science & technology, vol 53, iss 6
Environmental science & technology, vol 53, iss 6
We investigated the extent to which contact with mineral surfaces affected the molecular integrity of a model protein, with an emphasis on identifying the mechanisms (hydrolysis, oxidation) and conditions leading to protein alteration. To this end, w
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::7b57ff12c8eea56773b216ca53f88e31
https://doi.org/10.1021/acs.est.8b05583
https://doi.org/10.1021/acs.est.8b05583
Autor:
Philipp Mertins, Lijun Chen, Daniel W. Chan, Tao Liu, Deepak Mani, Hui Zhang, Karsten Krug, David J. Clark, Michael A. Gillette, Matthew E. Monroe, D. R. Mani, Steven A. Carr, Therese R. W. Clauss, Richard D. Smith, Marina A. Gritsenko, Filip Mundt, Sherri R. Davies, Karl R. Clauser, Hasmik Keshishian, Vladislav A. Petyuk, Namrata D. Udeshi, Yingwei Hu, Ronald J. Moore, Zhen Zhang, Punit Shah, Rui Zhao, Lauren C. Tang, Raymond R. Townsend, Michael Schnaubelt, Stefani N. Thomas
Publikováno v:
Nature Protocols. 13:1632-1661
Here we present an optimized workflow for global proteome and phosphoproteome analysis of tissues or cell lines that uses isobaric tags (TMT (tandem mass tags)-10) for multiplexed analysis and relative quantification, and provides 3× higher throughp
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::7a50619d3e989ded68caaeb59adf11f0
https://doi.org/10.1038/s41596-018-0006-9
https://doi.org/10.1038/s41596-018-0006-9
Autor:
Richard A. Corley, Therese R. W. Clauss, Joel G. Pounds, Aaron T. Wright, Bobbie-Jo M. Webb-Robertson, Natalie C. Sadler
Publikováno v:
Chemical Research in Toxicology. 31:308-318
Cytochrome P450 monooxygenase (P450) enzymes metabolize critical endogenous chemicals and oxidize nearly all xenobiotics. Dysregulated P450 activities lead to altered capacity for drug metabolism and cellular stress. The effects of mixed exposures on
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::0ae5412968991eb884c9d5619370325d
https://doi.org/10.1021/acs.chemrestox.8b00008
https://doi.org/10.1021/acs.chemrestox.8b00008
Autor:
Zhen Zhang, Tao Liu, Karin D. Rodland, Christopher R. Kinsinger, Ehwang Song, Molly Brewer, Osama A. Arshad, Steven M. Foltz, Emily S. Boja, Chen Huang, Liang-Bo Wang, Mathangi Thiagarajan, Ronald J. Moore, Marina A. Gritsenko, Michael Schnaubelt, Vladislav A. Petyuk, Samuel H. Payne, Yige Wu, Rui Zhao, Therese R. W. Clauss, Jason E. McDermott, Matthew E. Monroe, Athena A. Schepmoes, Henry Rodriguez, Richard D. Smith, Chia-Feng Tsai, Daniel W. Chan, Bing Zhang, Yi Fu, Matthew A. Wyczalkowski, Li Ding, Ana I. Robles
Publikováno v:
Cell Reports Medicine, Vol 1, Iss 1, Pp 100004-(2020)
Cell reports. Medicine
Cell Reports Medicine, Vol 1, Iss 5, Pp 100075-(2020)
Cell reports medicine
Cell reports. Medicine
Cell Reports Medicine, Vol 1, Iss 5, Pp 100075-(2020)
Cell reports medicine
SUMMARY In the absence of a dominant driving mutation other than uniformly present TP53 mutations, deeper understanding of the biology driving ovarian high-grade serous cancer (HGSC) requires analysis at a functional level, including post-translation
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::06eeb34b8f2fc4bf29a90a7c8abbeef3
https://doi.org/10.1016/j.xcrm.2020.100075
https://doi.org/10.1016/j.xcrm.2020.100075
Autor:
Margaret F, Romine, Dmitry A, Rodionov, Yukari, Maezato, Lindsey N, Anderson, Premchendar, Nandhikonda, Irina A, Rodionova, Alexandre, Carre, Xiaoqing, Li, Chengdong, Xu, Therese R W, Clauss, Young-Mo, Kim, Thomas O, Metz, Aaron T, Wright
Publikováno v:
Proceedings of the National Academy of Sciences of the United States of America. 114(7)
Using a chemical probe mimic of vitamin B12, we reveal a light- and B12-dependent DNA regulator, and make the unexpected discovery of B12 having regulatory involvement in microbial folate, ubiquinone, and methionine processes. These findings suggest
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=pmid________::d1e693be49d0a69049a0bb2bb1baf0fd
https://pubmed.ncbi.nlm.nih.gov/28137868
https://pubmed.ncbi.nlm.nih.gov/28137868
Elucidation of roles for vitamin B 12 in regulation of folate, ubiquinone, and methionine metabolism
Autor:
Dmitry A. Rodionov, Alexandre Carre, Chengdong Xu, Premchendar Nandhikonda, Xiaoqing Li, Young-Mo Kim, Therese R. W. Clauss, Lindsey N. Anderson, Aaron T. Wright, Margaret F. Romine, Irina A. Rodionova, Thomas O. Metz, Yukari Maezato
Publikováno v:
Proceedings of the National Academy of Sciences. 114
Significance Using a chemical probe mimic of vitamin B 12 , we reveal a light- and B 12 -dependent DNA regulator, and make the unexpected discovery of B 12 having regulatory involvement in microbial folate, ubiquinone, and methionine processes. These
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::394839c53ca3512b463f148717377d8a
https://doi.org/10.1073/pnas.1612360114
https://doi.org/10.1073/pnas.1612360114
Autor:
Sebastián Aguilar Pierlé, Samuel O. Purvine, Wendy C. Brown, Carrie D. Nicora, Kelly A. Brayton, Therese R. W. Clauss, Joshua E. Turse, Lwiindi Mudenda, Massaro W. Ueti, Glen A. Scoles
Publikováno v:
International Journal for Parasitology. 44(13):1029-1037
Dermacentor andersoni, known as the Rocky Mountain wood tick, is found in the western United States and transmits pathogens that cause diseases of veterinary and public health importance including Rocky Mountain spotted fever, tularemia, Colorado tic
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::8553592a2d4e2750fa80df4796f8420c
Autor:
Karin D. Rodland, Qianxing Mo, Sara R. Savage, Ronald J. Moore, Rui Zhao, Xiaojing Wang, Vladislav A. Petyuk, Matthew E. Monroe, Zhiao Shi, Osama A. Arshad, Ken S. Lau, Therese R. W. Clauss, Yongchao Dou, Robbert J.C. Slebos, Christopher R. Kinsinger, Bing Zhang, Lisa J. Zimmerman, Mathangi Thiagarajan, Richard D. Smith, Yi-Ting Wang, Marina A. Gritsenko, Suhas Vasaikar, Cptac Investigators, Matthew J. Ellis, Chen Huang, Daniel C. Liebler, Bo Wen, Matthew C. Chambers, Li Ding, Henry Rodriguez, Tao Liu, Jason E. McDermott, Yun Zhang
Publikováno v:
Cancer Research. 79:LB-006
We prospectively collected matched tumor specimens, adjacent non-tumor tissues, and blood samples from 110 colon cancer patients and analyzed the samples using seven omics platforms, including whole-exome sequencing, copy number arrays, RNA-Seq, miRN
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::626f835b6d6e00c9145dec6c5db4e206
https://doi.org/10.1158/1538-7445.am2019-lb-006
https://doi.org/10.1158/1538-7445.am2019-lb-006
Autor:
Emily S. Boja, Ratna R. Thangudu, Karl R. Clauser, Li Ding, Steven J. Skates, David L. Tabb, Tao Liu, Christopher R. Kinsinger, Yue Wang, Vladislav A. Petyuk, Andrew N. Hoofnagle, Matthew C. Chambers, Ie Ming Shih, Kelly V. Ruggles, Gordon Whiteley, Michael Snyder, Matthew J. Ellis, Stephen E. Stein, Mauricio Oberti, Karen A. Ketchum, Melissa Borucki, Samuel H. Payne, Eric Kuhn, Sara R. Savage, Zhiao Shi, Zhen Zhang, Yongchao Dou, David Fenyö, Bing Zhang, Melinda E. Sanders, Matthew E. Monroe, Shuang Cai, Philip Mertins, Peter B. McGarvey, Mathangi Thiagarajan, R. Reid Townsend, Daniel W. Chan, Robert Rivers, Nathan Edwards, Hui Zhang, Tara Hiltke, Bo Wen, Jasmin H. Bavarva, Steven A. Carr, Richard D. Smith, Mark A. Watson, Xiaojing Wang, Mehdi Mesri, Yi-Ting Wang, Douglas A. Levine, Linda Hannick, Rui Zhao, Suhas Vasaikar, Marina A. Gritsenko, Lisa J. Zimmerman, Forest M. White, Amanda G. Paulovich, Michael A. Gillette, Xian Chen, Henry Rodriguez, Ken S. Lau, Akhilesh Pandey, Robbert J.C. Slebos, Daniel C. Liebler, Jeffrey R. Whiteaker, Therese R. W. Clauss, Karin D. Rodland, Paul A. Rudnick, Subha Madhavan, Kimberly Elburn, Yun Zhang, Negin Vatanian, Osama A. Arshad, Sherri R. Davies, Jason E. McDermott, Qianxing Mo, Ronald J. Moore, David F. Ransohoff, D. R. Mani, Heng Zhu, Yingming Zhao, Chen Huang
Publikováno v:
Cell. 177:1035-1049.e19
We performed the first proteogenomic study on a prospectively collected colon cancer cohort. Comparative proteomic and phosphoproteomic analysis of paired tumor and normal adjacent tissues produced a catalog of colon cancer-associated proteins and ph
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::3f3c2d36061fe998f453e144227651fe
https://doi.org/10.1016/j.cell.2019.03.030
https://doi.org/10.1016/j.cell.2019.03.030