Zobrazeno 1 - 10 of 43 pro vyhledávání: '"Vorkel, Daniela"'
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GPU-accelerating ImageJ Macro image processing workflows using CLIJ
Autor: Vorkel, Daniela, Haase, Robert
This chapter introduces GPU-accelerated image processing in ImageJ/FIJI. The reader is expected to have some pre-existing knowledge of ImageJ Macro programming. Core concepts such as variables, for-loops, and functions are essential. The chapter prov
Externí odkaz: http://arxiv.org/abs/2008.11799
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3
Additional file 1 of A metabolic switch regulates the transition between growth and diapause in C. elegans
Autor: Sider Penkov, Bharath Kumar Raghuraman, Erkut, Cihan, Oertel, Jana, Galli, Roberta, Ackerman, Eduardo Jacobo Miranda, Vorkel, Daniela, Jean-Marc Verbavatz, Koch, Edmund, Fahmy, Karim, Shevchenko, Andrej, Teymuras V. Kurzchalia
Additional file 1: Figure S1. Heat flow of C. elegans undergoing reproductive growth or developmental arrest. Left panels - biological replicates generated in various experiments. Right panels - corresponding median heat flow per experiment. Curves r
Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::df0bb36affca9d3ab8425792043f1409
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4
Additional file 5 of A metabolic switch regulates the transition between growth and diapause in C. elegans
Autor: Sider Penkov, Bharath Kumar Raghuraman, Erkut, Cihan, Oertel, Jana, Galli, Roberta, Ackerman, Eduardo Jacobo Miranda, Vorkel, Daniela, Jean-Marc Verbavatz, Koch, Edmund, Fahmy, Karim, Shevchenko, Andrej, Teymuras V. Kurzchalia
Additional file 5: Figure S5. AAK-2 does not affect exit from dauer state but is required for the preservation of energy reserves in dauers and the gluconeogenic mode in adults. a Scheme of the SDS treatment experiment. b Survival after SDS treatment
Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::5c48a32aef44aada302f8836cc049189
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5
Additional file 6 of A metabolic switch regulates the transition between growth and diapause in C. elegans
Autor: Sider Penkov, Bharath Kumar Raghuraman, Erkut, Cihan, Oertel, Jana, Galli, Roberta, Ackerman, Eduardo Jacobo Miranda, Vorkel, Daniela, Jean-Marc Verbavatz, Koch, Edmund, Fahmy, Karim, Shevchenko, Andrej, Teymuras V. Kurzchalia
Additional file 6: Figure S6. LC-MS/MS (MS Western) analysis of metabolic enzymes. a-f Multiple peptide-based concordant quantification of an example protein isocitrate lyase (ICL-1). Extracted ion chromatograms (XIC) of ICL-1 endogenous peptides (a)
Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::68027e12ce155d98f4efe7dacba83415
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6
Additional file 3 of A metabolic switch regulates the transition between growth and diapause in C. elegans
Autor: Sider Penkov, Bharath Kumar Raghuraman, Erkut, Cihan, Oertel, Jana, Galli, Roberta, Ackerman, Eduardo Jacobo Miranda, Vorkel, Daniela, Jean-Marc Verbavatz, Koch, Edmund, Fahmy, Karim, Shevchenko, Andrej, Teymuras V. Kurzchalia
Additional file 3: Figure S3. Cumulative heat dissipation of larvae in a developmentally arrested state. Left panels - biological replicates generated in various experiments. Right panels - corresponding median heat per experiment. a Heat produced by
Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::21111e6b8543775f60dfed4f31e1de17
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7
Additional file 2 of A metabolic switch regulates the transition between growth and diapause in C. elegans
Autor: Sider Penkov, Bharath Kumar Raghuraman, Erkut, Cihan, Oertel, Jana, Galli, Roberta, Ackerman, Eduardo Jacobo Miranda, Vorkel, Daniela, Jean-Marc Verbavatz, Koch, Edmund, Fahmy, Karim, Shevchenko, Andrej, Teymuras V. Kurzchalia
Additional file 2: Figure S2. Electron micrographs of a daf-2 arrested L3 larva grown at 25 °C in the presence of DA. The body is not radially constricted but multiple lipid droplets are visible (left panel, arrowheads). Alae are absent (left panel)
Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::417bb63ae1846448f2e166ef81099eb6
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8
Additional file 4 of A metabolic switch regulates the transition between growth and diapause in C. elegans
Autor: Sider Penkov, Bharath Kumar Raghuraman, Erkut, Cihan, Oertel, Jana, Galli, Roberta, Ackerman, Eduardo Jacobo Miranda, Vorkel, Daniela, Jean-Marc Verbavatz, Koch, Edmund, Fahmy, Karim, Shevchenko, Andrej, Teymuras V. Kurzchalia
Additional file 4: Figure S4. DAF-16 controls the catabolism of energy reserves in dauer larvae. a TLC of lipids and sugars in daf-2 dauers and daf-2;daf-12 arrested L3 larvae grown at 25 °C, and wild-type (N2) dauers and daf-16 dauer-like larvae gr
Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::7819a536aa479a78df618d7e817ff72d
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Additional file 7 of A metabolic switch regulates the transition between growth and diapause in C. elegans
Autor: Sider Penkov, Bharath Kumar Raghuraman, Erkut, Cihan, Oertel, Jana, Galli, Roberta, Ackerman, Eduardo Jacobo Miranda, Vorkel, Daniela, Jean-Marc Verbavatz, Koch, Edmund, Fahmy, Karim, Shevchenko, Andrej, Teymuras V. Kurzchalia
Additional file 7: Figure S7. Control of the TCA and glyoxylate cycle. Absolute quantification of enzymes of the TCA cycle and the glyoxylate shunt in daf-2 and daf-2;aak-2 grown at 25 °C with or without DA compared to daf-2 animals at 15 °C. The r
Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::657e6d30316b337a960a14aefcfe7422
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