Identification and characterization of Coronaviridae genomes from Vietnamese bats and rats based on conserved protein domains

Autor: Phan, MVT, Tue, NT, Pham, HA, Baker, S, Kellam, P, Cotten, M, Bach, TK, Berto, A, Boni, MF, Bryant, JE, Bui, DP, Campbell, JI, Carrique-Mas, J, Dang, MH, Dang, TH, Dang, TO, Day, JN, Dinh, VT, Van Doorn, HR, Duong, AH, Farrar, JJ, Hau, TTT, Ho, DTN, Hoang, BL, Hoang, VD, Huynh, TKT, Lam, CC, Le, MH, Le, TP, Le, XL, Luu, TTH, Ly, VC, Mai, TPL, Nadjm, B, Ngo, TB, Ngo, TH, Nguyen, CT, Nguyen, DT, Nguyen, D, Nguyen, KC, Nguyen, NA, Nguyen, NV, Nguyen, QH, Nguyen, TD, Nguyen, TM, Nguyen, TB, Nguyen, THT, Nguyen, TKC, Nguyen, TLN, Nguyen, TLH, Nguyen, TNL, Nguyen, TND, Nguyen, TN, Nguyen, TSC, Nguyen, TYC, Nguyen, TT, Nguyen, TV, Nguyen, VC, Nguyen, VH, Nguyen, VK, Nguyen, VMH, Nguyen, V, Nguyen, VT, Nguyen, VVC, Nguyen, VX, Pham, HM, Pham, TMK, Pham, TTT, Pham, VL, Pham, VM, Phan, VBB, Rabaa, MA, Rahman, M, Thompson, C, Thwaites, G, Ta, TDN, Tran, DHN, Tran, HMC, Tran, KT, Tran, MP, Tran, TKH, Tran, TND, Tran, TTT, Tran, TTM, Tran, TN, Tran, TH, Trinh, QT, Vo, BH, Vo, NT, Vo, QC, Voong, VP, Vu, TLH, Vu, TTH, Wertheim, H, Bogaardt, C, Chase-Topping, M, Ivens, A, Lu, L, Dung, N, Rambaut, A, Simmonds, P, Woolhouse, M, Munnink, BO, Deijs, M, Van der Hoek, L, Jebbink, MF, Farsani, SMJ, Dodd, K, Euren, J, Lucas, A, Ortiz, N, Pennacchio, L, Rubin, E, Saylors, KE, Tran, MH, Wolfe, ND

Publikováno v: Virus Evolution
Virus Evolution, 4(2):vey035. Oxford University Press

The Coronaviridae family of viruses encompasses a group of pathogens with a zoonotic potential as observed from previous outbreaks of the severe acute respiratory syndrome coronavirus and Middle East respiratory syndrome coronavirus. Accordingly, it

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::612b909b1b1d0f9d61fca465b7c9e77e

Complete genome characterization of two wild-type measles viruses from Vietnamese infants during the 2014 outbreak

Autor: Munnink, BBO, My, VTP, Kellam, P, Cotten, M, Kiet, BT, Baker, S, Berto, A, Boni, MF, Bryant, JE, Bui, DP, Campbell, J, Carrique-Mas, J, Dang, MH, Dang, TH, Dang, TO, Day, JN, Dinh, VT, Van Doorn, HR, Duong, AH, Farrar, JJ, Hau, TTT, Ho, DTN, Hoang, BL, Hoang, VD, Huynh, TKT, Lam, CC, Le, MH, Le, TP, Le, XL, Luu, TTH, Ly, VC, Mai, TPL, Nadjm, B, Ngo, TB, Ngo, TH, Ngo, TT, Nguyen, CT, Nguyen, DT, Nguyen, D, Nguyen, KC, Nguyen, NA, Nguyen, NV, Nguyen, QH, Nguyen, TD, Nguyen, TM, Nguyen, TB, Nguyen, THT, Nguyen, TKC, Nguyen, TLN, Nguyen, TLH, Nguyen, TNL, Nguyen, TND, Nguyen, TN, Nguyen, TSC, Nguyen, TYC, Nguyen, TT, Nguyen, TV, Nguyen, VC, Nguyen, VH, Nguyen, VK, Nguyen, VMH, Nguyen, VM, Nguyen, VT, Nguyen, VVC, Nguyen, VX, Pham, HM, Pham, HA, Pham, TMK, Pham, TTT, Pham, VL, Pham, VM, Phan, VBB, Rabaa, MA, Rahman, M, Thompson, C, Thwaites, G, Ta, TDN, Tran, DHN, Tran, HMC, Tran, KT, Tran, MP, Tran, TKH, Tran, TND, Tran, TTT, Tran, TTM, Tran, TN, Tran, TH, Trinh, QT, Vo, BH, Vo, NT, Vo, QC, Voong, VP, Vu, TLH, Vu, TTH, Wertheim, H, Bogaardt, C, Chase-Topping, M, Ivens, A, Lu, L, Dung, N, Rambaut, A, Simmonds, P, Woolhouse, M, Deijs, M, Van der Hoek, L, Jebbink, MF, Farsani, SMJ, Saylors, K, Wolfe, N

Publikováno v: Oude Munnink, B B, Phan, M V T, Kellam, P, Cotten, M, Kiet, B T, Baker, S, Berto, A, Boni, M F, Bryant, J E, Phu, B D, Campbell, J I, Carrique-Mas, J, Hung, D M, Huong, D T, Oanh, D T, Day, J N, Van Tan, D, van Doorn, H R, Han, D A, Farrar, J J, Thu Trang, H T, Trung Nghia, H D, Long, H B, Van Duong, H, Thu, H T K, Cuong, L C, Hung, L M, Phuong, L T, Phuc, L T, Luat, L X, Thu Ha, L T, Van Chuong, L, Loan, M T P, Nadjm, B, Bao, N T, Hoa, N T, Tue, N T, Tu, N C, Thuan, N D, Dong, N, Chuyen, N K, An, N N, Vinh, N N, Hung, N Q, Dung, N T, Minh, N T, Binh, N T, Tham, N T H, Tien, N T H, Chuc, N T K, Le Ngoc, N T, Ha, N T L, Lien, N T N, Diep, N T N, Nhung, N T, Chau, N T S, Chi, N T Y, Trinh, N T, Van, N T, Van Cuong, N, Van Hung, N, Van Kinh, N, Hoang, N V M, Van My, N, Van Thang, N, Chau, N V V, Van Xang, N, My, P H, Anh, P H, Khoa, P T M, Tam, P T T, Van Lao, P, Van Minh, P, Bay, P V B, Rabaa, M A, Rahman, M, Thompson, C, Thwaites, G, Ngan, T T D, Nhu, T D H, Chau, T H M, Toan, T K, Phuc, T M, Hong, T T K, Dung, T T N, Thanh, T T T, Minh, T T T, Nguyen, T T, Hien, T T, Tri, T Q, Hien, V B, Tai, V N, Cuong, V Q, Phat, V V, Huong, V T L, Hang, V T T, Wertheim, H, Bogaardt, C, Chase-Topping, M, Lu, L, Ivens, A, Nyugen, D, Rambaut, A, Simmonds, P, Woolhouse, M, Phan, M V T, Deijs, M, van der Hoek, L, Jebbink, M F, Farsani, S M J, Saylors, K & Wolfe, N 2016, ' Complete genome characterization of two wild-type measles viruses from Vietnamese infants during the 2014 outbreak ', Genome announcements, vol. 4, no. 2, e00250-16 . https://doi.org/10.1128/genomeA.00250-16
Genome Announcements
Genome announcements, 4(2):e00250-16. American Society for Microbiology

A large measles virus outbreak occurred across Vietnam in 2014. We identified and obtained complete measles virus genomes in stool samples collected from two diarrheal pediatric patients in Dong Thap Province. These are the first complete genome sequ

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::8a46738d9396c9d53e051755e9c26825
https://hdl.handle.net/20.500.11820/623ec925-3588-431d-a1e8-4fbeb6adc780

Dissecting the molecular evolution of fluoroquinolone-resistant Shigella sonnei.

Autor: Chung The H; The Hospital for Tropical Diseases, Wellcome Trust Major Overseas Programme, Oxford University Clinical Research Unit, Ho Chi Minh City, Vietnam., Boinett C; The Hospital for Tropical Diseases, Wellcome Trust Major Overseas Programme, Oxford University Clinical Research Unit, Ho Chi Minh City, Vietnam.; Centre for Tropical Medicine and Global Health, Oxford University, Oxford, UK., Pham Thanh D; The Hospital for Tropical Diseases, Wellcome Trust Major Overseas Programme, Oxford University Clinical Research Unit, Ho Chi Minh City, Vietnam., Jenkins C; Gastrointestinal Bacterial Reference Unit, National Infection Service, Public Health England, London, UK., Weill FX; Institut Pasteur, Unité des Bactéries Pathogènes Entériques, Paris, France., Howden BP; Microbiological Diagnostic Unit Public Health Laboratory, Department of Microbiology and Immunology, Peter Doherty Institute for Infection and Immunity, The University of Melbourne, Melbourne, Australia., Valcanis M; Microbiological Diagnostic Unit Public Health Laboratory, Department of Microbiology and Immunology, Peter Doherty Institute for Infection and Immunity, The University of Melbourne, Melbourne, Australia., De Lappe N; National Salmonella, Shigella, and Listeria monocytogenes Reference Laboratory, University Hospital Galway, Galway, Ireland., Cormican M; School of Medicine, National University of Ireland Galway, Galway, Ireland., Wangchuk S; Public Health Laboratory, Department of Public Health, Ministry of Health, Royal Government of Bhutan, Thimphu, Bhutan., Bodhidatta L; Department of Enteric Diseases, Armed Forces Research Institute of Medical Sciences, Bangkok, Thailand., Mason CJ; Department of Enteric Diseases, Armed Forces Research Institute of Medical Sciences, Bangkok, Thailand., Nguyen TNT; The Hospital for Tropical Diseases, Wellcome Trust Major Overseas Programme, Oxford University Clinical Research Unit, Ho Chi Minh City, Vietnam., Ha Thanh T; The Hospital for Tropical Diseases, Wellcome Trust Major Overseas Programme, Oxford University Clinical Research Unit, Ho Chi Minh City, Vietnam., Voong VP; The Hospital for Tropical Diseases, Wellcome Trust Major Overseas Programme, Oxford University Clinical Research Unit, Ho Chi Minh City, Vietnam., Duong VT; The Hospital for Tropical Diseases, Wellcome Trust Major Overseas Programme, Oxford University Clinical Research Unit, Ho Chi Minh City, Vietnam., Nguyen PHL; The Hospital for Tropical Diseases, Wellcome Trust Major Overseas Programme, Oxford University Clinical Research Unit, Ho Chi Minh City, Vietnam.; The Hospital for Tropical Diseases, Ho Chi Minh City, Vietnam., Turner P; Centre for Tropical Medicine and Global Health, Oxford University, Oxford, UK.; Cambodia-Oxford Medical Research Unit, Angkor Hospital for Children, Siem Reap, Cambodia., Wick R; Department of Infectious Diseases, Central Clinical School, Monash University, Melbourne, VIC, 3004, Australia., Ceyssens PJ; Unit Bacterial Diseases, Sciensano, Brussels, Belgium., Thwaites G; The Hospital for Tropical Diseases, Wellcome Trust Major Overseas Programme, Oxford University Clinical Research Unit, Ho Chi Minh City, Vietnam.; Centre for Tropical Medicine and Global Health, Oxford University, Oxford, UK., Holt KE; Department of Infectious Diseases, Central Clinical School, Monash University, Melbourne, VIC, 3004, Australia.; London School of Hygiene and Tropical Medicine, London, UK., Thomson NR; London School of Hygiene and Tropical Medicine, London, UK.; The Wellcome Trust Sanger Institute, Hinxton, Cambridge, UK., Rabaa MA; The Hospital for Tropical Diseases, Wellcome Trust Major Overseas Programme, Oxford University Clinical Research Unit, Ho Chi Minh City, Vietnam. mrabaa@oucru.org.; Centre for Tropical Medicine and Global Health, Oxford University, Oxford, UK. mrabaa@oucru.org., Baker S; The Hospital for Tropical Diseases, Wellcome Trust Major Overseas Programme, Oxford University Clinical Research Unit, Ho Chi Minh City, Vietnam.; Centre for Tropical Medicine and Global Health, Oxford University, Oxford, UK.; Cambridge Institute of Therapeutic Immunology and Infectious Disease, The Department of Medicine, University of Cambridge, Cambridge, UK.

Publikováno v: Nature communications [Nat Commun] 2019 Oct 23; Vol. 10 (1), pp. 4828. Date of Electronic Publication: 2019 Oct 23.