Zobrazeno 1 - 10
of 127
pro vyhledávání: '"Volker Brendel"'
Autor:
Hong Lu, Prabhu Patil, Marie-Anne Van Sluys, Frank F White, Robert P Ryan, J Maxwell Dow, Pablo Rabinowicz, Steven L Salzberg, Jan E Leach, Ramesh Sonti, Volker Brendel, Adam J Bogdanove
Publikováno v:
PLoS ONE, Vol 3, Iss 11, p e3828 (2008)
Xanthomonas is a large genus of plant-associated and plant-pathogenic bacteria. Collectively, members cause diseases on over 392 plant species. Individually, they exhibit marked host- and tissue-specificity. The determinants of this specificity are u
Externí odkaz:
https://doaj.org/article/63a487737a1343769324b90f50af611b
Publikováno v:
Genome Res
Accurate mapping of transcription start sites (TSSs) is key for understanding transcriptional regulation. However, current protocols for genome-wide TSS profiling are laborious and/or expensive. We present Survey of TRanscription Initiation at Promot
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::b4f68f380adaba2bdeadf0b9a75e6b47
https://doi.org/10.1101/gr.261545.120
https://doi.org/10.1101/gr.261545.120
BackgroundThe rate at which new draft genome assemblies and corresponding annotation versions are being produced has long outpaced the scientific community’s capacity to refine these drafts into “finished,” reference-quality data resources to a
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::5eb1c0f3214b6e4e451a7201cd20f2ad
https://doi.org/10.1101/2021.10.03.462917
https://doi.org/10.1101/2021.10.03.462917
Autor:
Claire Morandin, Volker Brendel
DNA methylation is a common epigenetic signaling tool and an important biological process which is widely studied in a large array of species. The presence, level, and function of DNA methylation varies greatly across species. In insects, DNA methyla
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::4c7ffc76e7c0f0cf46b64a60ba7349ab
https://doi.org/10.1101/2021.08.19.457008
https://doi.org/10.1101/2021.08.19.457008
Publikováno v:
NAR Genomics and Bioinformatics
Heterogeneity in transcription initiation has important consequences for transcript stability and translation, and shifts in transcription start site (TSS) usage are prevalent in various developmental, metabolic, and disease contexts. Accordingly, nu
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::717537e750fb4b12fe1a19958202e9ef
https://doi.org/10.1093/nargab/lqab051
https://doi.org/10.1093/nargab/lqab051
Autor:
Dangping Luo, Volker Brendel, Frank F. White, Jose C. Huguet-Tapia, Bing Yang, R. Taylor Raborn
Publikováno v:
Plant Communications
Many plant disease resistance (R) genes function specifically in reaction to the presence of cognate effectors from a pathogen. Xanthomonas oryzae pathovar oryzae (Xoo) uses transcription activator-like effectors (TALes) to target specific rice genes
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::348648f619e61524bd49b250dfeb70d3
http://europepmc.org/articles/PMC8132128
http://europepmc.org/articles/PMC8132128
Accurate mapping of transcription start sites (TSSs) is key for understanding transcriptional regulation. However, current protocols for genome-wide TSS profiling are laborious and/or expensive. We present Survey of TRanscription Initiation at Promot
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::9b8ef505624a8445bb85a0e0a0177ef1
Publikováno v:
BMC Bioinformatics, Vol 20, Iss 1, Pp 1-13 (2019)
BMC Bioinformatics
BMC Bioinformatics
Background The falling cost of next-generation sequencing technology has allowed deep sequencing across related species and of individuals within species. Whole genome assemblies from these data remain high time- and resource-consuming computational
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::09f1ad4cb04c02d797a7037afdb95387
https://doi.org/10.1186/s12859-019-2949-4
https://doi.org/10.1186/s12859-019-2949-4
Autor:
Craig A. Stewart, David Y. Hancock, Therese Miller, Jeremy Fischer, R. Lee Liming, George Turner, John Michael Lowe, Steven Gregory, Edwin Skidmore, Matthew Vaughn, Dan Stanzione, Nirav Merchant, Ian Foster, James Taylor, Paul Rad, Volker Brendel, Enis Afgan, Michael Packard, Winona Snapp-Childs
Publikováno v:
Contemporary High Performance Computing ISBN: 9781351036863
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::8b70e0e6bd67c03f78de946120a588d0
https://doi.org/10.1201/9781351036863-8
https://doi.org/10.1201/9781351036863-8
Autor:
Claire Morandin, Heikki Helanterä, Alexander S. Mikheyev, Volker Brendel, Liselotte Sundström
Social insects provide systems for studying epigenetic regulation of phenotypes, particularly with respect to differentiation of reproductive and worker castes, which typically arise from a common genetic background. The role of gene expression in ca
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::463ba52c29c9f288fe7e6d165927be1f
http://hdl.handle.net/10138/313831
http://hdl.handle.net/10138/313831