Nitrosopumilus adriaticus sp. nov. and Nitrosopumilus piranensis sp. nov., two ammonia-oxidizing archaea from the Adriatic Sea and members of the class Nitrososphaeria

Autor: Bayer, B., Vojvoda, J., Reinthaler, T., Reyes, C., Pinto, M., Herndl, G.J.

Two mesophilic, neutrophilic and aerobic marine ammonia-oxidizing archaea, designated strains NF5T and D3CT, were isolated from coastal surface water of the Northern Adriatic Sea. Cells were straight small rods 0.20–0.25 µm wide and 0.49–2.00 µ

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=dedup_wf_001::fb48602af5324136478c52743ffdc1f8
https://www.vliz.be/imisdocs/publications/06/333506.pdf

Bacterial community shift is induced by dynamic environmental parameters in a changing coastal ecosystem (northern Adriatic, northeastern Mediterranean Sea) - a 2-year time-series study

Autor: Tinta, T, Vojvoda, J, Mozetic, P, Talaber, I, Vodopivec, M, Malfatti, F, Turk, V

The potential link between the microbial dynamics and the environmental parameters was investigated in a semi-enclosed and highly dynamic coastal system (Gulf of Trieste, northern Adriatic Sea, NE Mediterranean Sea). Our comprehensive 2-year time-ser

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=pmid_dedup__::49b9e55bb329b55957360fa9318d9f59
Wiley Online Library

Nitrosopumilus adriaticus sp. nov. and Nitrosopumilus piranensis sp. nov., two ammonia-oxidizing archaea from the Adriatic Sea and members of the class Nitrososphaeria.

Autor: Bayer B; 1​Department of Limnology and Bio-Oceanography, Center of Functional Ecology, University of Vienna, Vienna, Austria., Vojvoda J; 1​Department of Limnology and Bio-Oceanography, Center of Functional Ecology, University of Vienna, Vienna, Austria., Reinthaler T; 1​Department of Limnology and Bio-Oceanography, Center of Functional Ecology, University of Vienna, Vienna, Austria., Reyes C; 2​Department of Environmental Geosciences, Environmental Science Research Network, University of Vienna, Vienna, Austria., Pinto M; 1​Department of Limnology and Bio-Oceanography, Center of Functional Ecology, University of Vienna, Vienna, Austria., Herndl GJ; 1​Department of Limnology and Bio-Oceanography, Center of Functional Ecology, University of Vienna, Vienna, Austria.; 3​Department of Marine Microbiology and Biogeochemistry, NIOZ Royal Netherlands Institute for Sea Research, Utrecht University, Den Burg, The Netherlands.

Publikováno v: International journal of systematic and evolutionary microbiology [Int J Syst Evol Microbiol] 2019 Jul; Vol. 69 (7), pp. 1892-1902. Date of Electronic Publication: 2019 Apr 02.

Recovering high-quality bacterial genomes from cross-contaminated cultures: a case study of marine Vibrio campbellii.

Autor: Orel, Neža¹ (AUTHOR) neza.orel@nib.si, Fadeev, Eduard² (AUTHOR), Herndl, Gerhard J.^2,3 (AUTHOR), Turk, Valentina¹ (AUTHOR), Tinta, Tinkara¹ (AUTHOR) tinkara.tinta@nib.si

Publikováno v: BMC Genomics. 2/6/2024, Vol. 25, p1-15. 15p.

Physiological and genomic characterization of two novel marine thaumarchaeal strains indicates niche differentiation.

Autor: Bayer B; Department of Limnology and Bio-Oceanography, University of Vienna, Vienna, Austria., Vojvoda J; Department of Limnology and Bio-Oceanography, University of Vienna, Vienna, Austria.; National Institute of Biology, Fornace 41, Piran, Slovenia., Offre P; Department of Ecogenomics and Systems Biology, University of Vienna, Vienna, Austria., Alves RJ; Department of Ecogenomics and Systems Biology, University of Vienna, Vienna, Austria., Elisabeth NH; Department of Limnology and Bio-Oceanography, University of Vienna, Vienna, Austria., Garcia JA; Department of Limnology and Bio-Oceanography, University of Vienna, Vienna, Austria., Volland JM; Department of Limnology and Bio-Oceanography, University of Vienna, Vienna, Austria., Srivastava A; Department of Limnology and Bio-Oceanography, University of Vienna, Vienna, Austria., Schleper C; Department of Ecogenomics and Systems Biology, University of Vienna, Vienna, Austria., Herndl GJ; Department of Limnology and Bio-Oceanography, University of Vienna, Vienna, Austria.; Department of Biological Oceanography, Royal Netherlands Institute for Sea Research (NIOZ), Den Burg, The Netherlands.

Publikováno v: The ISME journal [ISME J] 2016 May; Vol. 10 (5), pp. 1051-63. Date of Electronic Publication: 2015 Nov 03.