Zobrazeno 1 - 10
of 14
pro vyhledávání: '"Vojtech Barton"'
Autor:
Eva Klvanova, Petra Videnska, Vojtech Barton, Jan Bohm, Petra Splichalova, Viktorie Koksova, Milan Urik, Barbara Lanickova, Roman Prokes, Eva Budinska, Jana Klanova, Petra Borilova Linhartova
Publikováno v:
Frontiers in Cellular and Infection Microbiology, Vol 14 (2024)
The antibiotic resistance genes (ARGs) limit the susceptibility of bacteria to antimicrobials, representing a problem of high importance. Current research on the presence of ARGs in microorganisms focuses mainly on humans, livestock, hospitals, or wa
Externí odkaz:
https://doaj.org/article/29358e582d084ef3a5d4f9aaad1c524b
Publikováno v:
BMC Genomics, Vol 23, Iss S3, Pp 1-12 (2022)
Abstract Background Bacterial genotyping is a crucial process in outbreak investigation and epidemiological studies. Several typing methods such as pulsed-field gel electrophoresis, multilocus sequence typing (MLST) and whole genome sequencing are cu
Externí odkaz:
https://doaj.org/article/1730819455ee4403b41293743281dad9
Autor:
Marketa Nykrynova, Roman Jakubicek, Vojtech Barton, Matej Bezdicek, Martina Lengerova, Helena Skutkova
Publikováno v:
Frontiers in Microbiology, Vol 13 (2022)
Recently, nanopore sequencing has come to the fore as library preparation is rapid and simple, sequencing can be done almost anywhere, and longer reads are obtained than with next-generation sequencing. The main bottleneck still lies in data postproc
Externí odkaz:
https://doaj.org/article/2c3a117c42f04c7db99ad70abd3fae0d
Autor:
Marketa Nykrynova, Vojtech Barton, Karel Sedlar, Matej Bezdicek, Martina Lengerova, Helena Skutkova
Publikováno v:
Frontiers in Microbiology, Vol 12 (2021)
Genotyping methods are used to distinguish bacterial strains from one species. Thus, distinguishing bacterial strains on a global scale, between countries or local districts in one country is possible. However, the highly selected bacterial populatio
Externí odkaz:
https://doaj.org/article/712d9bf1a6f14d8486ef8185911563fe
Publikováno v:
2021 IEEE International Conference on Bioinformatics and Biomedicine (BIBM).
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::ba8a15bb5af44cee64394cb4af93577f
https://doi.org/10.1109/bibm52615.2021.9669821
https://doi.org/10.1109/bibm52615.2021.9669821
Autor:
Marketa Nykrynova, Vojtech Barton, Martin Vitek, Matej Bezdicek, Martina Lengerova, Helena Skutkova
Publikováno v:
2021 IEEE International Conference on Bioinformatics and Biomedicine (BIBM).
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::c3b95f1862dc411f2be3f83cde76271d
https://doi.org/10.1109/bibm52615.2021.9669632
https://doi.org/10.1109/bibm52615.2021.9669632
Autor:
Vojtech Barton, Matej Bezdicek, Martin Vitek, Karel Sedlar, Helena Skutkova, Marketa Nykrynova, Robin Jugas, Martina Lengerová
Publikováno v:
Genomics. 113(5)
Discovering copy number variation (CNV) in bacteria is not in the spotlight compared to the attention focused on CNV detection in eukaryotes. However, challenges arising from bacterial drug resistance bring further interest to the topic of CNV and it
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::e27a60f682e184c41d5cfa13586b40ca
https://pubmed.ncbi.nlm.nih.gov/34224809
https://pubmed.ncbi.nlm.nih.gov/34224809
Publikováno v:
Bioinformatics and Biomedical Engineering ISBN: 9783030453848
IWBBIO
IWBBIO
Whole-genome sequencing becomes a powerful tool in the study of closely related bacterial population as a single nucleotides changes can be detected. However, the postprocessing of obtained data still remains problematic. Reference-based assembly of
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::5e215f0d82b1c3369c9ed6a5c4e67055
https://doi.org/10.1007/978-3-030-45385-5_51
https://doi.org/10.1007/978-3-030-45385-5_51
Publikováno v:
Acta Polytechnica CTU Proceedings, Vol 47 (2024)
This paper deals with the description and use of one of the up-to-date NDT method, the ultrasonic pulse echo, to determine the thickness of an asphalt concrete model. In the article, the authors explain the principle of the method and the limits of i
Externí odkaz:
https://doaj.org/article/fff17d4d002d46f1a24e31c3a793ec2c
Autor:
Marketa Nykrynova, Helena Skutkova, Matej Bezdicek, Vojtech Barton, Martina Lengerová, Denisa Maderankova
Publikováno v:
Bioinformatics and Biomedical Engineering ISBN: 9783030179342
IWBBIO (2)
IWBBIO (2)
Genotyping is necessary for the discrimination of bacteria strains. However, methods such as multilocus sequence typing (MLST) or minim typing (mini-MLST) use a combination of several genes. In this paper, we present an augmented method for typing Kl
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::3c9ce9f92b5af53988314fc97c7c3ee7
https://doi.org/10.1007/978-3-030-17935-9_17
https://doi.org/10.1007/978-3-030-17935-9_17