Three-Dimensional Structure of Cytochrome c Nitrite Reductase As Determined by Cryo-Electron Microscopy

Autor: Tn, Baymukhametov, Ym, Chesnokov, Eb, Pichkur, Km, Boyko, Tv, Tikhonova, Ag, Myasnikov, Alexander Vasiliev, Av, Lipkin, Vo, Popov, Mv, Kovalchuk

Publikováno v: Europe PubMed Central
Acta Naturae

The structure of cytochrome c nitrite reductase from the bacterium Thioalkalivibrio nitratireducens was determined by cryo-electron microscopy (cryo-EM) at a 2.56 Å resolution. Possible structural heterogeneity of the enzyme was assessed. The backbo

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=pmid_dedup__::42748dac7dea03b8eb2d3836c58aab70
http://europepmc.org/abstract/med/30397526

Structural basis of selective beta-carotene binding by a soluble protein.

Autor: Egorkin NA; A.N. Bach Institute of Biochemistry, Federal Research Centre of Biotechnology of the Russian Academy of Sciences, 33 Leninsky prospect, building 1, Moscow 119071, Russia; M.V. Lomonosov Moscow State University, School of Biology, 1 Lenin Hills, building 12, Moscow 119991, Russia., Dominnik EE; A.N. Bach Institute of Biochemistry, Federal Research Centre of Biotechnology of the Russian Academy of Sciences, 33 Leninsky prospect, building 1, Moscow 119071, Russia; M.V. Lomonosov Moscow State University, School of Chemistry, 1 Lenin Hills, building 3, Moscow 119991, Russia., Raevskii RI; A.N. Bach Institute of Biochemistry, Federal Research Centre of Biotechnology of the Russian Academy of Sciences, 33 Leninsky prospect, building 1, Moscow 119071, Russia., Kuklina DD; Moscow Institute of Physics and Technology, Institutski per. 9, Dolgoprudny 141700, Russia., Varfolomeeva LA; A.N. Bach Institute of Biochemistry, Federal Research Centre of Biotechnology of the Russian Academy of Sciences, 33 Leninsky prospect, building 1, Moscow 119071, Russia., Popov VO; A.N. Bach Institute of Biochemistry, Federal Research Centre of Biotechnology of the Russian Academy of Sciences, 33 Leninsky prospect, building 1, Moscow 119071, Russia., Boyko KM; A.N. Bach Institute of Biochemistry, Federal Research Centre of Biotechnology of the Russian Academy of Sciences, 33 Leninsky prospect, building 1, Moscow 119071, Russia., Sluchanko NN; A.N. Bach Institute of Biochemistry, Federal Research Centre of Biotechnology of the Russian Academy of Sciences, 33 Leninsky prospect, building 1, Moscow 119071, Russia. Electronic address: nikolai.sluchanko@mail.ru.

Publikováno v: Structure (London, England : 1993) [Structure] 2024 Nov 07; Vol. 32 (11), pp. 2123-2133.e3. Date of Electronic Publication: 2024 Oct 08.

Molecular mechanism of thiocyanate dehydrogenase at atomic resolution.

Autor: Varfolomeeva LA; Laboratory of Enzyme Engineering, Federal Research Centre «Fundamentals of Biotechnology» of the Russian Academy of Sciences, Leninsky Prospect, 33, Build. 2, Moscow 119071, Russian Federation., Shipkov NS; Laboratory of Enzyme Engineering, Federal Research Centre «Fundamentals of Biotechnology» of the Russian Academy of Sciences, Leninsky Prospect, 33, Build. 2, Moscow 119071, Russian Federation., Dergousova NI; Laboratory of Enzyme Engineering, Federal Research Centre «Fundamentals of Biotechnology» of the Russian Academy of Sciences, Leninsky Prospect, 33, Build. 2, Moscow 119071, Russian Federation., Boyko KM; Laboratory of Enzyme Engineering, Federal Research Centre «Fundamentals of Biotechnology» of the Russian Academy of Sciences, Leninsky Prospect, 33, Build. 2, Moscow 119071, Russian Federation., Khrenova MG; Laboratory of Enzyme Engineering, Federal Research Centre «Fundamentals of Biotechnology» of the Russian Academy of Sciences, Leninsky Prospect, 33, Build. 2, Moscow 119071, Russian Federation; Department of Chemistry, Lomonosov Moscow State University, Leninskiye Gory 1, Moscow 119991, Russian Federation., Tikhonova TV; Laboratory of Enzyme Engineering, Federal Research Centre «Fundamentals of Biotechnology» of the Russian Academy of Sciences, Leninsky Prospect, 33, Build. 2, Moscow 119071, Russian Federation., Popov VO; Laboratory of Enzyme Engineering, Federal Research Centre «Fundamentals of Biotechnology» of the Russian Academy of Sciences, Leninsky Prospect, 33, Build. 2, Moscow 119071, Russian Federation; Department of Biology, Lomonosov Moscow State University, Leninskiye Gory 1, Moscow 119991, Russian Federation. Electronic address: v.popov@fbras.ru.

Publikováno v: International journal of biological macromolecules [Int J Biol Macromol] 2024 Nov; Vol. 279 (Pt 1), pp. 135058. Date of Electronic Publication: 2024 Aug 25.

The Arthropoda-specific Tramtrack group BTB protein domains use previously unknown interface to form hexamers.

Autor: Bonchuk AN; Department of the Control of Genetic Processes, Institute of Gene Biology Russian Academy of Sciences, Moscow, Russian Federation.; Center for Precision Genome Editing and Genetic Technologies for Biomedicine, Institute of Gene Biology, Russian Academy of Sciences, Moscow, Russian Federation., Balagurov KI; Department of the Control of Genetic Processes, Institute of Gene Biology Russian Academy of Sciences, Moscow, Russian Federation., Baradaran R; Bioscience Program, Division of Biological and Environmental Science and Engineering (BESE), King Abdullah University of Science and Technology (KAUST), Thuwal, Saudi Arabia., Boyko KM; Bach Institute of Biochemistry, Research Center of Biotechnology Russian Academy of Sciences, Moscow, Russian Federation., Sluchanko NN; Bach Institute of Biochemistry, Research Center of Biotechnology Russian Academy of Sciences, Moscow, Russian Federation., Khrustaleva AM; Department of the Control of Genetic Processes, Institute of Gene Biology Russian Academy of Sciences, Moscow, Russian Federation., Burtseva AD; Bach Institute of Biochemistry, Research Center of Biotechnology Russian Academy of Sciences, Moscow, Russian Federation.; Moscow Institute of Physics and Technology, Institutsky lane 9, Moscow, Russian Federation., Arkova OV; Center for Precision Genome Editing and Genetic Technologies for Biomedicine, Institute of Gene Biology, Russian Academy of Sciences, Moscow, Russian Federation., Khalisova KK; Department of the Control of Genetic Processes, Institute of Gene Biology Russian Academy of Sciences, Moscow, Russian Federation., Popov VO; Bach Institute of Biochemistry, Research Center of Biotechnology Russian Academy of Sciences, Moscow, Russian Federation., Naschberger A; Bioscience Program, Division of Biological and Environmental Science and Engineering (BESE), King Abdullah University of Science and Technology (KAUST), Thuwal, Saudi Arabia., Georgiev PG; Department of the Control of Genetic Processes, Institute of Gene Biology Russian Academy of Sciences, Moscow, Russian Federation.

Publikováno v: ELife [Elife] 2024 Sep 02; Vol. 13. Date of Electronic Publication: 2024 Sep 02.

Structural Basis for Evasion of New SARS-CoV-2 Variants from the Potent Virus-Neutralizing Nanobody Targeting the S-Protein Receptor-Binding Domain.

Autor: Sluchanko NN; Bach Institute of Biochemistry, Federal Research Centre 'Fundamentals of Biotechnology', Russian Academy of Sciences, Moscow, 119071, Russia. nikolai.sluchanko@mail.ru.; National Research Center for Epidemiology and Microbiology named after Honorary Academician N. F. Gamaleya, Ministry of Health of the Russian Federation, Moscow, 123098, Russia., Shcheblyakov DV; National Research Center for Epidemiology and Microbiology named after Honorary Academician N. F. Gamaleya, Ministry of Health of the Russian Federation, Moscow, 123098, Russia. sdmitriyv@mail.ru., Varfolomeeva LA; Bach Institute of Biochemistry, Federal Research Centre 'Fundamentals of Biotechnology', Russian Academy of Sciences, Moscow, 119071, Russia., Favorskaya IA; National Research Center for Epidemiology and Microbiology named after Honorary Academician N. F. Gamaleya, Ministry of Health of the Russian Federation, Moscow, 123098, Russia., Dolzhikova IV; National Research Center for Epidemiology and Microbiology named after Honorary Academician N. F. Gamaleya, Ministry of Health of the Russian Federation, Moscow, 123098, Russia., Korobkova AI; National Research Center for Epidemiology and Microbiology named after Honorary Academician N. F. Gamaleya, Ministry of Health of the Russian Federation, Moscow, 123098, Russia., Alekseeva IA; National Research Center for Epidemiology and Microbiology named after Honorary Academician N. F. Gamaleya, Ministry of Health of the Russian Federation, Moscow, 123098, Russia., Esmagambetov IB; National Research Center for Epidemiology and Microbiology named after Honorary Academician N. F. Gamaleya, Ministry of Health of the Russian Federation, Moscow, 123098, Russia., Derkaev AA; National Research Center for Epidemiology and Microbiology named after Honorary Academician N. F. Gamaleya, Ministry of Health of the Russian Federation, Moscow, 123098, Russia., Prokofiev VV; National Research Center for Epidemiology and Microbiology named after Honorary Academician N. F. Gamaleya, Ministry of Health of the Russian Federation, Moscow, 123098, Russia., Zorkov ID; National Research Center for Epidemiology and Microbiology named after Honorary Academician N. F. Gamaleya, Ministry of Health of the Russian Federation, Moscow, 123098, Russia., Logunov DY; National Research Center for Epidemiology and Microbiology named after Honorary Academician N. F. Gamaleya, Ministry of Health of the Russian Federation, Moscow, 123098, Russia., Gintsburg AL; National Research Center for Epidemiology and Microbiology named after Honorary Academician N. F. Gamaleya, Ministry of Health of the Russian Federation, Moscow, 123098, Russia., Popov VO; Bach Institute of Biochemistry, Federal Research Centre 'Fundamentals of Biotechnology', Russian Academy of Sciences, Moscow, 119071, Russia., Boyko KM; Bach Institute of Biochemistry, Federal Research Centre 'Fundamentals of Biotechnology', Russian Academy of Sciences, Moscow, 119071, Russia. kmb@inbi.ras.ru.; National Research Center for Epidemiology and Microbiology named after Honorary Academician N. F. Gamaleya, Ministry of Health of the Russian Federation, Moscow, 123098, Russia.

Publikováno v: Biochemistry. Biokhimiia [Biochemistry (Mosc)] 2024 Jul; Vol. 89 (7), pp. 1260-1272.