Zobrazeno 1 - 10
of 78
pro vyhledávání: '"Vladimir N. Minin"'
Autor:
Chelsea R. Baker, Ivan Barilar, Leonardo S. de Araujo, Anne W. Rimoin, Daniel M. Parker, Rosanna Boyd, James L. Tobias, Patrick K. Moonan, Eleanor S. Click, Alyssa Finlay, John E. Oeltmann, Vladimir N. Minin, Chawangwa Modongo, Nicola M. Zetola, Stefan Niemann, Sanghyuk S. Shin
Publikováno v:
Emerging Infectious Diseases, Vol 29, Iss 5, Pp 977-987 (2023)
Combining genomic and geospatial data can be useful for understanding Mycobacterium tuberculosis transmission in high-burden tuberculosis (TB) settings. We performed whole-genome sequencing on M. tuberculosis DNA extracted from sputum cultures from a
Externí odkaz:
https://doaj.org/article/4d741a4e927a49c6a8443c138fc4b25d
Autor:
Daniel M. Parker, Tim Bruckner, Verónica M. Vieira, Catalina Medina, Vladimir N. Minin, Philip L. Felgner, Alissa Dratch, Matthew Zahn, Scott M. Bartell, Bernadette Boden-Albala
Publikováno v:
Emerging Infectious Diseases, Vol 27, Iss 10, Pp 2604-2618 (2021)
We conducted a detailed analysis of coronavirus disease in a large population center in southern California, USA (Orange County, population 3.2 million), to determine heterogeneity in risks for infection, test positivity, and death. We used a combina
Externí odkaz:
https://doaj.org/article/6436134e462348ae82d150aa3d8b3a9d
Publikováno v:
BMC Genomics, Vol 19, Iss 1, Pp 1-12 (2018)
Abstract Background Helicobacter pylori is a human stomach pathogen, naturally-competent for DNA uptake, and prone to homologous recombination. Extensive homoplasy (i.e., phylogenetically-unlinked identical variations) observed in H. pylori genes is
Externí odkaz:
https://doaj.org/article/265a95b2343b45139a357fcaa11ebc7b
Publikováno v:
Evolutionary Bioinformatics, Vol 2013, Iss 9, Pp 235-238 (2013)
Externí odkaz:
https://doaj.org/article/2c263b916a5049f0be2b1934639d3abb
Publikováno v:
PeerJ, Vol 2, p e373 (2014)
We examine heritability estimation of an ordinal trait for osteoarthritis, using a population of pig-tailed macaques from the Washington National Primate Research Center (WaNPRC). This estimation is non-trivial, as the data consist of ordinal measure
Externí odkaz:
https://doaj.org/article/f75d470afa5a4c14aac5b2e81b635709
Publikováno v:
Ann Appl Stat
The annals of applied statistics, vol 17, iss 1
The annals of applied statistics, vol 17, iss 1
Phylodynamics is a set of population genetics tools that aim at reconstructing demographic history of a population based on molecular sequences of individuals sampled from the population of interest. One important task in phylodynamics is to estimate
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::ef6e3430e66bf4542b0335d1ce65be60
https://europepmc.org/articles/PMC10237588/
https://europepmc.org/articles/PMC10237588/
Publikováno v:
ArXiv
Branching process inspired models are widely used to estimate the effective reproduction number -- a useful summary statistic describing an infectious disease outbreak -- using counts of new cases. Case data is a real-time indicator of changes in the
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=pmid________::f076df69323cc37e9d5955ffec9adfdb
https://pubmed.ncbi.nlm.nih.gov/35979401
https://pubmed.ncbi.nlm.nih.gov/35979401
Autor:
Chelsea R. Baker, Ivan Barilar, Leonardo S. de Araujo, Anne W. Rimoin, Daniel M. Parker, Rosanna Boyd, James L. Tobias, Patrick K. Moonan, Eleanor S. Click, Alyssa Finlay, John E. Oeltmann, Vladimir N. Minin, Chawangwa Modongo, Nicola M. Zetola, Stefan Niemann, Sanghyuk S. Shin
IntroductionCombining genomic and geospatial data can be useful for understanding Mycobacterium tuberculosis (Mtb) transmission in high tuberculosis burden settings.MethodsWe performed whole genome sequencing (WGS) on Mtb DNA extracted from sputum cu
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::ca06c8b06e5ee111ec6fd775be4ef22c
https://doi.org/10.1101/2022.04.13.22273731
https://doi.org/10.1101/2022.04.13.22273731
Publikováno v:
ArXiv
Stochastic epidemic models (SEMs) fit to incidence data are critical to elucidating outbreak dynamics, shaping response strategies, and preparing for future epidemics. SEMs typically represent counts of individuals in discrete infection states using
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::8d5ed44d091f9b7296148e4879dfdec0
https://pubmed.ncbi.nlm.nih.gov/34374071
https://pubmed.ncbi.nlm.nih.gov/34374071
Autor:
Daniel M. Parker, Matthew Zahn, Philip L. Felgner, Verónica M. Vieira, Alissa Dratch, Catalina Medina, Bernadette Boden-Albala, Vladimir N. Minin, Tim Bruckner, Scott M. Bartell
Author(s): Parker, Daniel; Bruckner, Tim; Vieira, Veronica; Medina, Catalina; Minin, Vladimir; Felgner, Philip; Dratch, Alissa; Zahn, Matthew; Bartell, Scott; Boden-Albala, Bernadette | Abstract: COVID-19 is one of the largest public health emergenci
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::100a28489b7142286f000a239b1a4fad
https://doi.org/10.1101/2021.01.13.21249507
https://doi.org/10.1101/2021.01.13.21249507