Zobrazeno 1 - 10
of 24
pro vyhledávání: '"Vindhya Amarasinghe"'
Autor:
Marcela K. Monaco, Taner Z. Sen, Palitha D. Dharmawardhana, Liya Ren, Mary Schaeffer, Sushma Naithani, Vindhya Amarasinghe, Jim Thomason, Lisa Harper, Jack Gardiner, Ethalinda K.S. Cannon, Carolyn J. Lawrence, Doreen Ware, Pankaj Jaiswal
Publikováno v:
The Plant Genome, Vol 6, Iss 1 (2013)
A framework for understanding the synthesis and catalysis of metabolites and other biochemicals by proteins is crucial for unraveling the physiology of cells. To create such a framework for L. subsp. (maize), we developed MaizeCyc, a metabolic networ
Externí odkaz:
https://doaj.org/article/8d5ebe32e2064b0386c726b7800af56d
Publikováno v:
Scientific Reports, Vol 10, Iss 1, Pp 1-14 (2020)
Scientific Reports
Scientific Reports
To better understand the molecular control of leaf senescence, we examined transcriptome changes during seasonal leaf senescence in Populus trichocarpa Nisqually-1, the Populus reference genome, growing in its natural habitat. Using monthly (from May
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::e2d43f3e0d4eb04f4539d5a736cc87bb
https://doi.org/10.1038/s41598-020-63372-2
https://doi.org/10.1038/s41598-020-63372-2
Autor:
Marcio Alves-Ferreira, Steven H. Strauss, Pankaj Jaiswal, Sushma Naithani, Amy L. Klocko, Alexander Andrew Myburg, Elisson Romanel, Charles A. Hefer, James Wesley-Smith, Vindhya Amarasinghe, Rebecca C. Jones, Kelly J. Vining, Palitha Dharmawardhana, Luke Solomon, Martin Ranik
Publikováno v:
New Phytologist. 206:1406-1422
As a step toward functional annotation of genes required for floral initiation and development within the Eucalyptus genome, we used short read sequencing to analyze transcriptomes of floral buds from early and late developmental stages, and compared
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::01f063f23ff05236555a327d06cdb80e
https://doi.org/10.1111/nph.13077
https://doi.org/10.1111/nph.13077
Autor:
Sunita Kumari, Vindhya Amarasinghe, Pankaj Jaiswal, Andrew Olson, Brandon Walts, Sushma Naithani, Paul J. Kersey, Joshua C. Stein, Daniel M. Staines, Marcela K. Monaco, Guanming Wu, Arnaud Kerhornou, Justin Preece, Palitha Dharmawardhana, Peter D'Eustachio, James Thomason, Dan Bolser, Yinping Jiao, David Croft, Lincoln D. Stein, Ken Youens-Clark, Robin Haw, Shiran Pasternak, Zhenyuan Lu, Sharon Wei, Doreen Ware
Publikováno v:
Nucleic Acids Research
Europe PubMed Central
Europe PubMed Central
Gramene (http://www.gramene.org) is a curated online resource for comparative functional genomics in crops and model plant species, currently hosting 27 fully and 10 partially sequenced reference genomes in its build number 38. Its strength derives f
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::443215c2b2b5c12f6bf894fbbe557124
http://europepmc.org/articles/PMC3964986
http://europepmc.org/articles/PMC3964986
Autor:
Vindhya Amarasinghe, Ryan P. O’Donnell, Becky Cooper, Christopher J. Bayne, Michael S. Blouin, Kaitlin M. Bonner
Publikováno v:
International Journal for Parasitology. 43:51-55
Allelic variation at the Cu–Zn superoxide dismutase (SOD1) locus has been shown to be associated with resistance of the snail, Biomphalaria glabrata, to infection by the trematode parasite, Schistosoma mansoni. SOD1 catalyses the production of hydr
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::7a0f2b303f950fa7396dea3dc22d7f68
https://doi.org/10.1016/j.ijpara.2012.10.020
https://doi.org/10.1016/j.ijpara.2012.10.020
Autor:
Antonio Fabregat, Maria Keays, Lincoln D. Stein, Peter D'Eustachio, Palitha Dharmawardhana, Parul Gupta, Joel Weiser, Pankaj Jaiswal, Alfonso Muñoz-Pomer Fuentes, Guanming Wu, Sushma Naithani, Justin Elser, Justin Preece, Vindhya Amarasinghe, Robert Petryszak, Doreen Ware
Publikováno v:
Nucleic Acids Research
Plant Reactome (http://plantreactome.gramene.org/) is a free, open-source, curated plant pathway database portal, provided as part of the Gramene project. The database provides intuitive bioinformatics tools for the visualization, analysis and interp
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::eb4146cbb521497e77d6f52272fcbb5f
https://pubmed.ncbi.nlm.nih.gov/27799469
https://pubmed.ncbi.nlm.nih.gov/27799469
Publikováno v:
Molecular Breeding. 36
Gene flow from recombinant-DNA-modified (GMO) trees is a major barrier to their public acceptance and regulatory approval. Because many intensively grown trees are vegetatively propagated, complete sexual sterility could be a powerful means to mitiga
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::3a83b7563aa1da13213b6876398a21ad
https://doi.org/10.1007/s11032-016-0546-z
https://doi.org/10.1007/s11032-016-0546-z
Autor:
Sharon Wei, Justin Preece, Andrew Olson, Y. Amy Tang, James Thomason, Bo Wang, Palitha Dharmawardhana, Paul J. Kersey, Dan Bolser, Lincoln D. Stein, Helen Parkinson, Joseph Mulvaney, Vindhya Amarasinghe, Sheldon J. McKay, Robert Petryszak, Yinping Jiao, Pankaj Jaiswal, Brandon Walts, Maria Keays, Sushma Naithani, Antonio Fabregat, Joshua C. Stein, Justin Elser, Nuno A. Fonseca, Joel Weiser, Marcela K. Tello-Ruiz, Doreen Ware, Sunita Kumari, Kapeel Chougule, Peter D'Eustachio, Arnaud Kerhornou, Laura Huerta
Publikováno v:
Nucleic Acids Research
Gramene (http://www.gramene.org) is an online resource for comparative functional genomics in crops and model plant species. Its two main frameworks are genomes (collaboration with Ensembl Plants) and pathways (The Plant Reactome and archival BioCyc
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::cab57c6ea6828b6fbf229e5a597b04e2
https://pubmed.ncbi.nlm.nih.gov/26553803
https://pubmed.ncbi.nlm.nih.gov/26553803
Autor:
Vindhya Amarasinghe, John E. Carlson
Publikováno v:
Canadian Journal of Forest Research. 32:1904-1915
The microsatellite motifs AG, AC, and ATG were found to be the most abundant in Douglas-fir (Pseudotsuga menziesii (Mirb.) Franco) and several other conifer tree species among di-, tri-, and tetra-nucleotide simple sequence repeats (SSR). Colonies co
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::fa37546a79b969bc83635265268e2123
https://doi.org/10.1139/x02-110
https://doi.org/10.1139/x02-110
Autor:
Anand Raj Kumar Kullan, Erich Bornberg-Bauer, Christopher M. Sullivan, Florent Murat, Elisson Romanel, Yves Van de Peer, Aaron Liston, Priya Ranjan, Dorothy A. Steane, Justin Elser, Pooja Singh, Victor Carocha, Orzenil B. Silva-Junior, Marçal Soler, Cesar Petroli, Inna Dubchak, Jane Grimwood, Carsten Külheim, Danielle A. Faria, Ida Van Jaarsveld, Chu-Yu Ye, Giancarlo Pasquali, Charles A. Hefer, Desre Pinard, Roberto C. Togawa, Richard D. Hayes, Eshchar Mizrachi, Fourie Joubert, Erika Lindquist, Kevin Vanneste, Philippe Rigault, Jérôme Salse, Karen Van der Merwe, David Kudrna, Palitha Dharmwardhana, Gerald A. Tuskan, Diane Bauer, Alexandre Poliakov, Marcio Alves-Ferreira, Kerrie Barry, Vindhya Amarasinghe, Ting Li, William J. Foley, Georgios J. Pappas, Carolina Sansaloni, René E. Vaillancourt, Marília de Castro Rodrigues Pappas, Uffe Hellsten, Daniel S. Rokhsar, Martin Ranik, Anna R. Kersting, Alexander Andrew Myburg, Hua Cassan-Wang, David Goodstein, Christophe Dunand, Naijib Saidi, Timothy J. Tschaplinski, Sushma Naithani, Dario Grattapaglia, Pankaj Jaiswal, Steven G. Hussey, Jeremy Schmutz, Rajani Raja, Brad M. Potts, Margaret Byrne, Antanas V. Spokevicius, Jorge A. P. Paiva, Jacqueline Grima-Pettenati, Xiaohan Yang, Alexander Boyd, Hope Tice, Joseph W. Spatafora, Lieven Sterck, Jerry Jenkins, Steven H. Strauss, Sérgio Hermínio Brommonschenkel, Josquin Tibbits, Rebecca C. Jones, Kelly J. Vining, Hélène San Clemente
Publikováno v:
Nature
Nature, Nature Publishing Group, 2014, 510 (7505), pp.356-362. ⟨10.1038/nature13308⟩
Nature 7505 (510), 356-362. (2014)
LOCUS Repositório Institucional da UFV
Universidade Federal de Viçosa (UFV)
instacron:UFV
NATURE
Nature, 2014, 510 (7505), pp.356-362. ⟨10.1038/nature13308⟩
Nature, Nature Publishing Group, 2014, 510 (7505), pp.356-362. ⟨10.1038/nature13308⟩
Nature 7505 (510), 356-362. (2014)
LOCUS Repositório Institucional da UFV
Universidade Federal de Viçosa (UFV)
instacron:UFV
NATURE
Nature, 2014, 510 (7505), pp.356-362. ⟨10.1038/nature13308⟩
International audience; Eucalypts are the world's most widely planted hardwood trees. Their outstanding diversity, adaptability and growth have made them a global renewable resource of fibre and energy. We sequenced and assembled >94% of the 640-mega
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::3dd0de5bb2b6509083d149bf42bee74a
https://hal.archives-ouvertes.fr/hal-02285478
https://hal.archives-ouvertes.fr/hal-02285478
