Zobrazeno 1 - 10
of 51
pro vyhledávání: '"Vinay K. Kartha"'
Autor:
Vinay K. Kartha, Khalid A. Alamoud, Khikmet Sadykov, Bach-Cuc Nguyen, Fabrice Laroche, Hui Feng, Jina Lee, Sara I. Pai, Xaralabos Varelas, Ann Marie Egloff, Jennifer E. Snyder-Cappione, Anna C. Belkina, Manish V. Bais, Stefano Monti, Maria A. Kukuruzinska
Publikováno v:
Genome Medicine, Vol 10, Iss 1, Pp 1-18 (2018)
Abstract Background Head and neck squamous cell carcinoma (HNSCC) is an aggressive malignancy characterized by tumor heterogeneity, locoregional metastases, and resistance to existing treatments. Although a number of genomic and molecular alterations
Externí odkaz:
https://doaj.org/article/3f10be2b6404420f97878bd8174c79b8
Autor:
Vinay K. Kartha, Paola Sebastiani, Joseph G. Kern, Liye Zhang, Xaralabos Varelas, Stefano Monti
Publikováno v:
Frontiers in Genetics, Vol 10 (2019)
The identification of genetic alteration combinations as drivers of a given phenotypic outcome, such as drug sensitivity, gene or protein expression, and pathway activity, is a challenging task that is essential to gaining new biological insights and
Externí odkaz:
https://doaj.org/article/efa684582a0046c185ff3ec7111d269d
Autor:
Tyler Jacks, Jason D. Buenrostro, Aviv Regev, Carla F. Kim, Charles M. Rudin, Natasha Rekhtman, Gregory J. Riely, Roderick T. Bronson, Manav Gupta, Kevin Meli, Francisco J. Sánchez-Rivera, Peter M.K. Westcott, Vinay K. Kartha, Manon Miller, Adam J. Schoenfeld, Isabella Del Priore, Jonathan Y. Kim, Lydia P. DeAngelo, Manyuan Liu, Arjun Bhutkar, Lindsay M. LaFave, Sai Ma, Carla P. Concepcion
Supplementary Figures related to Figures 1-6
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::4fc3d2abf491d2aed509bace98e32b78
https://doi.org/10.1158/2159-8290.22541081.v1
https://doi.org/10.1158/2159-8290.22541081.v1
Autor:
Tyler Jacks, Jason D. Buenrostro, Aviv Regev, Carla F. Kim, Charles M. Rudin, Natasha Rekhtman, Gregory J. Riely, Roderick T. Bronson, Manav Gupta, Kevin Meli, Francisco J. Sánchez-Rivera, Peter M.K. Westcott, Vinay K. Kartha, Manon Miller, Adam J. Schoenfeld, Isabella Del Priore, Jonathan Y. Kim, Lydia P. DeAngelo, Manyuan Liu, Arjun Bhutkar, Lindsay M. LaFave, Sai Ma, Carla P. Concepcion
Processed data for bulk RNA-seq of primary tumors isolated from KP, KPS-HET and KPS animals
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::7b34017cdb6d509327a6779c56532668
https://doi.org/10.1158/2159-8290.22541084
https://doi.org/10.1158/2159-8290.22541084
Autor:
Tyler Jacks, Jason D. Buenrostro, Aviv Regev, Carla F. Kim, Charles M. Rudin, Natasha Rekhtman, Gregory J. Riely, Roderick T. Bronson, Manav Gupta, Kevin Meli, Francisco J. Sánchez-Rivera, Peter M.K. Westcott, Vinay K. Kartha, Manon Miller, Adam J. Schoenfeld, Isabella Del Priore, Jonathan Y. Kim, Lydia P. DeAngelo, Manyuan Liu, Arjun Bhutkar, Lindsay M. LaFave, Sai Ma, Carla P. Concepcion
Processed data for bulk ATAC-seq of isogenic SMARCA4-WT and -KO cell lines
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::d74e81c89c1f111fdc821cff53ec855d
https://doi.org/10.1158/2159-8290.22541096.v1
https://doi.org/10.1158/2159-8290.22541096.v1
Autor:
Tyler Jacks, Jason D. Buenrostro, Aviv Regev, Carla F. Kim, Charles M. Rudin, Natasha Rekhtman, Gregory J. Riely, Roderick T. Bronson, Manav Gupta, Kevin Meli, Francisco J. Sánchez-Rivera, Peter M.K. Westcott, Vinay K. Kartha, Manon Miller, Adam J. Schoenfeld, Isabella Del Priore, Jonathan Y. Kim, Lydia P. DeAngelo, Manyuan Liu, Arjun Bhutkar, Lindsay M. LaFave, Sai Ma, Carla P. Concepcion
Mutations and copy number alterations in PDX models used in this study
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::2727f2c645d5056a98ef4b1e7ac249c5
https://doi.org/10.1158/2159-8290.22541078
https://doi.org/10.1158/2159-8290.22541078
Autor:
Tyler Jacks, Jason D. Buenrostro, Aviv Regev, Carla F. Kim, Charles M. Rudin, Natasha Rekhtman, Gregory J. Riely, Roderick T. Bronson, Manav Gupta, Kevin Meli, Francisco J. Sánchez-Rivera, Peter M.K. Westcott, Vinay K. Kartha, Manon Miller, Adam J. Schoenfeld, Isabella Del Priore, Jonathan Y. Kim, Lydia P. DeAngelo, Manyuan Liu, Arjun Bhutkar, Lindsay M. LaFave, Sai Ma, Carla P. Concepcion
Processed data for bulk RNA-seq of isogenic SMARCA4-WT and -KO cell lines
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::d52d8ecb56becd9d8e98ad0a4ad8581b
https://doi.org/10.1158/2159-8290.22541090
https://doi.org/10.1158/2159-8290.22541090
Autor:
Tyler Jacks, Jason D. Buenrostro, Aviv Regev, Carla F. Kim, Charles M. Rudin, Natasha Rekhtman, Gregory J. Riely, Roderick T. Bronson, Manav Gupta, Kevin Meli, Francisco J. Sánchez-Rivera, Peter M.K. Westcott, Vinay K. Kartha, Manon Miller, Adam J. Schoenfeld, Isabella Del Priore, Jonathan Y. Kim, Lydia P. DeAngelo, Manyuan Liu, Arjun Bhutkar, Lindsay M. LaFave, Sai Ma, Carla P. Concepcion
SMARCA4/BRG1 encodes for one of two mutually exclusive ATPases present in mammalian SWI/SNF chromatin remodeling complexes and is frequently mutated in human lung adenocarcinoma. However, the functional consequences of SMARCA4 mutation on tumor initi
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::53c444972f838f79de09a6a762799058
https://doi.org/10.1158/2159-8290.c.6549551.v1
https://doi.org/10.1158/2159-8290.c.6549551.v1
Autor:
Tyler Jacks, Jason D. Buenrostro, Aviv Regev, Carla F. Kim, Charles M. Rudin, Natasha Rekhtman, Gregory J. Riely, Roderick T. Bronson, Manav Gupta, Kevin Meli, Francisco J. Sánchez-Rivera, Peter M.K. Westcott, Vinay K. Kartha, Manon Miller, Adam J. Schoenfeld, Isabella Del Priore, Jonathan Y. Kim, Lydia P. DeAngelo, Manyuan Liu, Arjun Bhutkar, Lindsay M. LaFave, Sai Ma, Carla P. Concepcion
Processed data for CUT&RUN of isogenic SMARCA4-WT and -KO cell lines
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::1dbf27db74b4779f83dc7c5a53d81c15
https://doi.org/10.1158/2159-8290.22541093.v1
https://doi.org/10.1158/2159-8290.22541093.v1
Autor:
Xaralabos Varelas, Stefano Monti, Manish V. Bais, Maria Kukuruzinska, Vikki Noonan, Munirah Almershed, Trevor S. Packer, Vinay K. Kartha, Liye Zhang, Samantha E. Hiemer
Supplementary Table 1. RNAi used in the study.
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::1d8558278f1f3450d087c283d2d25a12
https://doi.org/10.1158/1541-7786.22515226.v1
https://doi.org/10.1158/1541-7786.22515226.v1