Zobrazeno 1 - 10
of 37
pro vyhledávání: '"Vinícius G Contessoto"'
Modeling Chikungunya control strategies and Mayaro potential outbreak in the city of Rio de Janeiro.
Autor:
Esteban Dodero-Rojas, Luiza G Ferreira, Vitor B P Leite, José N Onuchic, Vinícius G Contessoto
Publikováno v:
PLoS ONE, Vol 15, Iss 1, p e0222900 (2020)
Mosquito-borne diseases have become a significant health issue in many regions around the world. For tropical countries, diseases such as Dengue, Zika, and Chikungunya, became epidemic in the last decades. Health surveillance reports during this peri
Externí odkaz:
https://doaj.org/article/dcb865889b594b03ad8bad78acca202b
Autor:
Benjamin S. Ruben, Sumitabha Brahmachari, Vinícius G. Contessoto, Ryan R. Cheng, Antonio B. Oliveira Junior, Michele Di Pierro, José N. Onuchic
Publikováno v:
Biophysical Journal. 122:1633-1645
Micromechanical studies of mitotic chromosomes have revealed them to be remarkably extensible objects and informed early models of mitotic chromosome organization. We use a data-driven, coarsegrained polymer modeling approach, capable of generating e
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::0604331ddb37ee411b69537199138df3
https://doi.org/10.1016/j.bpj.2023.03.029
https://doi.org/10.1016/j.bpj.2023.03.029
Autor:
Paulo Henrique Borges Ferreira, Ronaldo Junio de Oliveira, Jorge Chahine, Vinícius G. Contessoto, Vitor B. P. Leite
Publikováno v:
Scopus
Repositório Institucional da UNESP
Universidade Estadual Paulista (UNESP)
instacron:UNESP
Repositório Institucional da UNESP
Universidade Estadual Paulista (UNESP)
instacron:UNESP
Made available in DSpace on 2022-05-01T09:47:32Z (GMT). No. of bitstreams: 0 Previous issue date: 2021-10-28 Molecular crowding is a ubiquitous phenomenon in biological systems, with significant consequences on protein folding and stability. Small co
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::07126a1289503a0376005a1188045eb5
https://doi.org/10.1021/acs.jpcb.1c07663
https://doi.org/10.1021/acs.jpcb.1c07663
Autor:
Ricardo Rodrigues de Melo, Josiane Aniele Scarpassa, Gabriel G. Slade, Letícia Maria Zanphorlin, Vitor B. P. Leite, Vinícius G. Contessoto, Felipe Cardoso Ramos, Amanda Silva de Sousa, Roberto Ruller, Vinícius M. de Oliveira
Publikováno v:
Web of Science
Repositório Institucional da UNESP
Universidade Estadual Paulista (UNESP)
instacron:UNESP
Biophys J
Repositório Institucional da UNESP
Universidade Estadual Paulista (UNESP)
instacron:UNESP
Biophys J
Made available in DSpace on 2021-06-25T15:07:21Z (GMT). No. of bitstreams: 0 Previous issue date: 2021-06-01 Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP) Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES) Con
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::e513174fb385e9faae376941cb126667
https://doi.org/10.1016/j.bpj.2021.03.036
https://doi.org/10.1016/j.bpj.2021.03.036
Autor:
Christopher Markosian, Daniela I. Staquicini, Prashant Dogra, Esteban Dodero-Rojas, Joseph H. Lubin, Fenny H.F. Tang, Tracey L. Smith, Vinícius G. Contessoto, Steven K. Libutti, Zhihui Wang, Vittorio Cristini, Sagar D. Khare, Paul C. Whitford, Stephen K. Burley, José N. Onuchic, Renata Pasqualini, Wadih Arap
Publikováno v:
Molecular Biology and Evolution. 39
Evaluation of immunogenic epitopes for universal vaccine development in the face of ongoing SARS-CoV-2 evolution remains a challenge. Herein, we investigate the genetic and structural conservation of an immunogenically relevant epitope (C662–C671)
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::ac5e1c4bd4b0159c18d771da585e9a1d
https://doi.org/10.1093/molbev/msac091
https://doi.org/10.1093/molbev/msac091
Autor:
Ryan R. Cheng, Arya Hajitaheri, Erez Lieberman Aiden, Esteban Dodero-Rojas, Matheus F. Mello, Vinícius G. Contessoto, José N. Onuchic, Peter G. Wolynes, Michele Di Pierro
Publikováno v:
Scopus
Repositório Institucional da UNESP
Universidade Estadual Paulista (UNESP)
instacron:UNESP
Nucleic Acids Research
Repositório Institucional da UNESP
Universidade Estadual Paulista (UNESP)
instacron:UNESP
Nucleic Acids Research
Made available in DSpace on 2021-06-25T10:15:21Z (GMT). No. of bitstreams: 0 Previous issue date: 2021-01-08 Welch Foundation National Science Foundation We introduce the Nucleome Data Bank (NDB), a web-based platform to simulate and analyze the thre
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::2ea3d12f47e421a07f1286fa79b28a57
https://doi.org/10.1093/nar/gkaa818
https://doi.org/10.1093/nar/gkaa818
Autor:
Vinícius G. Contessoto, Olga Dudchenko, Erez Lieberman Aiden, Peter G. Wolynes, José N. Onuchic, Michele Di Pierro
We use data-driven physical simulations to study the three-dimensional architecture of the Aedes aegypti genome. Hi-C maps exhibit both a broad diagonal and compart-mentalization with telomeres and centromeres clustering together. Physical modeling r
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::fc595c5612951fac1af32e9782de4d1f
https://doi.org/10.1101/2022.02.01.478655
https://doi.org/10.1101/2022.02.01.478655
Publikováno v:
Protein Folding ISBN: 9781071617151
Computational coarse-grained models play a fundamental role as a research tool in protein folding, and they are important in bridging theory and experiments. Folding mechanisms are generally discussed using the energy landscape framework, which is we
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::aee87d3950edb827e1537ce4a3ab4609
https://doi.org/10.1007/978-1-0716-1716-8_16
https://doi.org/10.1007/978-1-0716-1716-8_16
Publikováno v:
Methods in molecular biology (Clifton, N.J.). 2376
Computational coarse-grained models play a fundamental role as a research tool in protein folding, and they are important in bridging theory and experiments. Folding mechanisms are generally discussed using the energy landscape framework, which is we
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=pmid________::39d560e73786ee00366779f1d24218af
https://pubmed.ncbi.nlm.nih.gov/34845616
https://pubmed.ncbi.nlm.nih.gov/34845616
Autor:
Asem Hassan, Vinícius G. Contessoto, Antonio B. de Oliveira, Yang Wang, Esteban Dodero-Rojas, José N. Onuchic, Ailun Wang, Udayan Mohanty, Paul C. Whitford, Sandra Byju, Jeffrey K. Noel
Applying simulations with structure-based (Gō-like) models has proven to be an effective strategy for investigating the factors that control biomolecular dynamics. The common element of these models is that some (or all) of the intra/inter-molecular
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::ba964fb5a0649c340e10d5d19b54b671
https://doi.org/10.1101/2021.08.15.456423
https://doi.org/10.1101/2021.08.15.456423