Zobrazeno 1 - 10
of 16
pro vyhledávání: '"Victor Jaravine"'
Publikováno v:
BMC Cancer, Vol 17, Iss 1, Pp 1-9 (2017)
Abstract Background Adoptive immunotherapy offers great potential for treating many types of cancer but its clinical application is hampered by cross-reactive T cell responses in healthy human tissues, representing serious safety risks for patients.
Externí odkaz:
https://doaj.org/article/8f851a44bf914073b2a4325d5f650372
Publikováno v:
PLoS ONE, Vol 8, Iss 7, p e68567 (2013)
Adequate digital resolution and signal sensitivity are two critical factors for protein structure determinations by solution NMR spectroscopy. The prime objective for obtaining high digital resolution is to resolve peak overlap, especially in NOESY s
Externí odkaz:
https://doaj.org/article/0c1ee625418e4504b8ed02c17e97ec2e
Publikováno v:
Computational Biology and Chemistry. 46:8-15
The quality of protein structures obtained by different experimental and ab-initio calculation methods varies considerably. The methods have been evolving over time by improving both experimental designs and computational techniques, and since the pr
Autor:
Gert Vriend, Hendrik R. A. Jonker, Nuno Loureiro-Ferreira, Geerten W. Vuister, Sjoerd J. Vries, Christophe Schmitz, Wim F. Vranken, Johan van der Zwan, Lucio Ferella, Stefano Dal Pra, Daniel Franke, John Ionides, Harald Schwalbe, Chris A. E. M. Spronk, Rolf Boelens, Simone Badoer, Dmitri I. Svergun, Alexey Kikhney, Marc van Dijk, Anurag Bagaria, Peter Güntert, Victor Jaravine, M. Mazzucato, Tsjerk A. Wassenaar, Ivano Bertini, Ernest D. Laue, Antonio Rosato, E. Frizziero, Simonas Jurkša, M. Verlato, Jurgen F. Doreleijers, Torsten Herrmann, Alexandre M. J. J. Bonvin, Gijs van der Schot, Rasmus H. Fogh, Andrea Giachetti
Publikováno v:
Journal of Grid Computing
ICT FP7 Publications Database
JOURNAL OF GRID COMPUTING, 10(4), 743-767. Springer Netherlands
Journal of Grid Computing, Springer Verlag, 2012, 10 (4), pp.743-767
Wassenaar, T A, van Dijk, M, Loureiro-Ferreira, N, van der Schot, G, de Vries, S J, Schmitz, C, van der Zwan, J, Boelens, R, Giachetti, A, Ferella, L, Rosato, A, Bertini, I, Herrmann, T, Jonker, H R A, Bagaria, A, Jaravine, V, Guntert, P, Schwalbe, H, Vranken, W F, Doreleijers, J F, Vriend, G, Vuister, G W, Franke, D, Kikhney, A, Svergun, D I, Fogh, R H, Ionides, J, Laue, E D, Spronk, C, Jurksa, S, Verlato, M, Badoer, S, Dal Pra, S, Mazzucato, M, Frizziero, E & Bonvin, A M J J 2012, ' WeNMR: Structural Biology on the Grid ', JOURNAL OF GRID COMPUTING, vol. 10, no. 4, pp. 743-767 . https://doi.org/10.1007/s10723-012-9246-z
ICT FP7 Publications Database
JOURNAL OF GRID COMPUTING, 10(4), 743-767. Springer Netherlands
Journal of Grid Computing, Springer Verlag, 2012, 10 (4), pp.743-767
Wassenaar, T A, van Dijk, M, Loureiro-Ferreira, N, van der Schot, G, de Vries, S J, Schmitz, C, van der Zwan, J, Boelens, R, Giachetti, A, Ferella, L, Rosato, A, Bertini, I, Herrmann, T, Jonker, H R A, Bagaria, A, Jaravine, V, Guntert, P, Schwalbe, H, Vranken, W F, Doreleijers, J F, Vriend, G, Vuister, G W, Franke, D, Kikhney, A, Svergun, D I, Fogh, R H, Ionides, J, Laue, E D, Spronk, C, Jurksa, S, Verlato, M, Badoer, S, Dal Pra, S, Mazzucato, M, Frizziero, E & Bonvin, A M J J 2012, ' WeNMR: Structural Biology on the Grid ', JOURNAL OF GRID COMPUTING, vol. 10, no. 4, pp. 743-767 . https://doi.org/10.1007/s10723-012-9246-z
International audience; The WeNMR (http://www.wenmr.eu) project is a European Union funded international effort to streamline and automate analysis of Nuclear Magnetic Resonance (NMR) and Small Angle X-Ray scattering (SAXS) imaging data for atomic an
Publikováno v:
Bioinformatics 33, 104-111 (2017)
Motivation Cross-reactivity (CR) or invocation of autoimmune side effects in various tissues has important safety implications in adoptive immunotherapy directed against selected antigens. The ability to predict CR (on-target and off-target toxicitie
Publikováno v:
Protein Science. 21:229-238
Large-scale initiatives for obtaining spatial protein structures by experimental or computational means have accentuated the need for the critical assessment of protein structure determination and prediction methods. These include blind test projects
Autor:
Vladislav Yu. Orekhov, Victor Jaravine
Publikováno v:
Progress in Nuclear Magnetic Resonance Spectroscopy. 59:271-292
Publikováno v:
Journal of the American Chemical Society. 130:3927-3936
An approach is described for joint interleaved recording, real-time processing, and analysis of NMR data sets. The method employs multidimensional decomposition to find common information in a set of conventional triple-resonance spectra recorded in
Publikováno v:
Nature Methods. 3:605-607
We introduce the recursive multidimensional decomposition (R-MDD) method to speed recording of high-resolution NMR spectra. The measurement time is logarithmically dependent on the sizes of indirect spectral dimensions. R-MDD has the sensitivity and
Autor:
Victor Jaravine, Vladimir V. Rogov, Natalia Yu. Rogova, Frank Löhr, Peter Güntert, Alexis Rozenknop, Ivan Dikic, Volker Dötsch, Suhas Tikole
Publikováno v:
ChemBioChem
Modified ubiquitin sequences, each completed with a His tag and a TEV cleavage site, were designed to enhance the expression of protein/peptide targets. With this new system we have been able to characterize several peptide-protein interactions by IT