FragKB: structural and literature annotation resource of conserved peptide fragments and residues.

Autor: Ashish V Tendulkar, Martin Krallinger, Victor de la Torre, Gonzalo López, Pramod P Wangikar, Alfonso Valencia

Publikováno v: PLoS ONE, Vol 5, Iss 3, p e9679 (2010)

BACKGROUND: FragKB (Fragment Knowledgebase) is a repository of clusters of structurally similar fragments from proteins. Fragments are annotated with information at the level of sequence, structure and function, integrating biological descriptions de

Externí odkaz: https://doaj.org/article/0387567336f7478abf14ccc879c58017

Fujitsu HIKARI, a Healthcare Decision Support System based on Biomedical Knowledge

Autor: Victor De La Torre, Blanca Reneses, Beatriz San Miguel, Juan Carlos Muria, Nuria Garcia-Santa, Boris Villazon-Terrazas, German Seara, Ángel Del Rey-Mejías

Publikováno v: International Journal of Privacy and Health Information Management. 6:26-49

Fujitsu HIKARI is an artificial intelligence solution to assist clinicians in medical decision making, developed in the context of a joint collaboration project between Fujitsu Laboratories of Europe and Hospital Clínico San Carlos. This decision su

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_________::997fc6b58db5119ff8f98a96c3500c7d
https://doi.org/10.4018/ijphim.2018070103

Scientific competency questions as the basis for semantically enriched open pharmacological space development

Autor: Emiliano Cuadrado Rodríguez, Gerhard F. Ecker, Christine Chichester, Manuel Pastor, Niklas Blomberg, Barbara Zdrazil, Lee Harland, Jordi Mestres, Olivier Taboureau, Antony J. Williams, Matthias Rarey, Steve Pettifer, Edgar Jacoby, Marta Pinto, Bryn Williams-Jones, Stefan Senger, Mabel Loza, Kamal Azzaoui, Victor De La Torre

Publikováno v: Recercat. Dipósit de la Recerca de Catalunya
instname
Azzaoui, K, Jacoby, E, Senger, S, Rodríguez, E C, Loza, M, Zdrazil, B, Pinto, M, Williams, A J, de la Torre, V, Mestres, J, Pastor, M, Taboureau, O, Rarey, M, Chichester, C, Pettifer, S, Blomberg, N, Harland, L, Williams-Jones, B & Ecker, G F 2013, ' Scientific competency questions as the basis for semantically enriched open pharmacological space development ', Drug Discovery Today, vol. 18, no. 17-18, pp. 843-852 . https://doi.org/10.1016/j.drudis.2013.05.008

Molecular information systems play an important part in modern data-driven drug discovery. They do not only support decision making but also enable new discoveries via association and inference. In this review, we outline the scientific requirements

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::b683dc9dc85e2d4169fb3a019e94ebe1
http://hdl.handle.net/10230/25218

Mutated genes, pathways and processes in tumours

Autor: Anaïs Baudot, Alfonso Valencia, Victor De La Torre

Publikováno v: EMBO Reports

Mutated genes, pathways and processes in tumours This analysis of genes mutated in cancers, drawn from small and large-scale genome studies, allows the authors to draw a map of pathways and processes altered by cancers, revealing both common and spec

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::6c8de5e538fc23b4bae0f2a688a82094
https://pubmed.ncbi.nlm.nih.gov/20847737

Tools and data services registry: a community effort to document bioinformatics resources

Autor: Callum Smith, Paolo Uva, Thomas Gatter, Peter Løngreen, Peter Juvan, Hans Ienasescu, Giuseppe Profiti, Aleksandra Nenadic, Kristoffer Rapacki, Chris Morris, Paola Roncaglia, Steffen Möller, Laura Emery, Søren Brunak, Maria Maddalena Sperotto, Heinz Stockinger, Kristian Davidsen, Federico Zambelli, Helen Parkinson, Olivia Doppelt-Azeroual, Luana Licata, Tatyana Goldberg, Andrea Schafferhans, Elisabeth Gasteiger, Emil Karol Rydza, Camille Laibe, Victor De La Torre, Marie Grosjean, Manuela Helmer-Citterich, Hervé Ménager, Radka Svobodová Vařeková, Rafael C. Jimenez, Martin Closter Jespersen, Anthony Bretaudeau, Jan Brezovsky, Tunca Doğan, Matúš Kalaš, Peter M. Rice, Ivan Mičetić, Rune Møllegaard Friborg, Maximilian Koch, Silvio C. E. Tosatto, Nick Juty, Björn Grüning, Gianmauro Cuccuru, Frederik Coppens, Gianni Cesareni, Jon Ison, Rabie Saidi, Sébastien Moretti, Rita Casadio, Gert Vriend, Guy Yachdav, Niall Beard, Timothy F. Booth, Michael Cornell, Piotr Jaroslaw Chmura, Veit Schwämmle, Karel Berka, Dan Bolser, Vassilios Ioannidis, Jing-Woei Li, Burkhard Rost, Gianluca Della Vedova, Fabien Mareuil, Hedi Peterson, Allegra Via, Paolo Romano, Christian Anthon

Publikováno v: Nucleic Acids Research, vol. 44, no. D1, pp. D38-D47
Nucleic Acids Research
Nucleic acids research 44 (2016): D38–D47. doi:10.1093/nar/gkv1116
info:cnr-pdr/source/autori:Ison, Jon; Rapacki, Kristoffer; Ménager, Hervé; Kala?, Matú?; Rydza, Emil; Chmura, Piotr; Anthon, Christian; Beard, Niall; Berka, Karel; Bolser, Dan; Booth, Tim; Bretaudeau, Anthony; Brezovsky, Jan; Casadio, Rita; Cesareni, Gianni; Coppens, Frederik; Cornell, Michael; Cuccuru, Gianmauro; Davidsen, Kristian; Della Vedova, Gianluca; Dogan, Tunca; Doppelt-Azeroual, Olivia; Emery, Laura; Gasteiger, Elisabeth; Gatter, Thomas; Goldberg, Tatyana; Grosjean, Marie; Gruüing, Björn; Helmer-Citterich, Manuela; Ienasescu, Hans; Ioannidis, Vassilios; Jespersen, Martin Closter; Jimenez, Rafael; Juty, Nick; Juvan, Peter; Koch, Maximilian; Laibe, Camille; Li, Jing Woei; Licata, Luana; Mareuil, Fabien; Mi?eti?, Ivan; Friborg, Rune Møllegaard; Moretti, Sebastien; Morris, Chris; Möller, Steffen; Nenadic, Aleksandra; Peterson, Hedi; Profiti, Giuseppe; Rice, Peter; Romano, Paolo; Roncaglia, Paola; Saidi, Rabie; Schafferhans, Andrea; Schwämmle, Veit; Smith, Callum; Sperotto, Maria Maddalena; Stockinger, Heinz; Var?ková, Radka Svobodová; Tosatto, Silvio C.E.; De La Torre, Victor; Uva, Paolo; Via, Allegra; Yachdav, Guy; Zambelli, Federico; Vriend, Gert; Rost, Burkhard; Parkinson, Helen; Løngreen, Peter; Brunak, Søren/titolo:Tools and data services registry: A community effort to document bioinformatics resources/doi:10.1093%2Fnar%2Fgkv1116/rivista:Nucleic acids research/anno:2016/pagina_da:D38/pagina_a:D47/intervallo_pagine:D38–D47/volume:44
Nucleic Acids Research, Oxford University Press, 2016, 44 (D1), pp.D38-47. ⟨10.1093/nar/gkv1116⟩
NUCLEIC ACIDS RESEARCH
Møllegaard Friborg, R, Jon Ison, Kristoffer Rapacki, Hervé Ménager, Matúš Kalaš, Emil Rydza, Piotr Chmura, Christian Anthon, Niall Beard, Karel Berka, Dan Bolser, Tim Booth, Anthony Bretaudeau, Jan Brezovsky, Rita Casadio, Gianni Cesareni, Frederik Coppens, Michael Cornell, Gianmauro Cuccuru, Kristian Davidsen, Gianluca Della Vedova, Tunca Dogan, Olivia Doppelt-Azeroual, Laura Emery, Elisabeth Gasteiger, Thomas Gatter, Tatyana Goldberg, Marie Grosjean, Björn Grüning, Manuela Helmer-Citterich, Hans Ienasescu, Vassilios Ioannidis, Martin Closter Jespersen, Rafael Jimenez, Nick Juty, Peter Juvan, Maximilian Koch, Camille Laibe, Jing-Woei Li, Luana Licata, Fabien Mareuil, Ivan Mičetić & Sebastien Moretti, Chris Morris, Steffen Möller, Aleksandra Nenadic, Hedi Peterson, Giuseppe Profiti, Peter Rice, Paolo Romano, Paola Roncaglia, Rabie Saidi, Andrea Schafferhans, Veit Schwämmle, Callum Smith, Maria Maddalena Sperotto, Heinz Stockinger, Radka Svobodová Vařeková, Silvio C.E. Tosatto, Victor de la Torre, Paolo Uva, Allegra Via, Guy Yachdav, Federico Zambelli, Gert Vriend, Burkhard Rost, Helen Parkinson, Peter Løngreen, Søren Brunak 2015, ' Tools and data services registry: a community effort to document bioinformatics resources ', Nucleic Acids Research, vol. 44, no. D1, pp. D38-D47 . https://doi.org/10.1093/nar/gkv1116
Ison, J, Rapacki, K, Ménager, H, Kalaš, M, Rydza, E, Chmura, P, Anthon, C, Beard, N, Berka, K, Bolser, D, Booth, T, Bretaudeau, A, Brezovsky, J, Casadio, R, Cesareni, G, Coppens, F, Cornell, M, Cuccuru, G, Davidsen, K, Vedova, G D, Dogan, T, Doppelt-Azeroual, O, Emery, L, Gasteiger, E, Gatter, T, Goldberg, T, Grosjean, M, Grüning, B, Helmer-Citterich, M, Ienasescu, H-I, Ioannidis, V, Jespersen, M C, Jimenez, R, Juty, N, Juvan, P, Koch, M, Laibe, C, Li, J-W, Licata, L, Mareuil, F, Mičetić, I, Friborg, R M, Moretti, S, Morris, C, Möller, S, Nenadic, A, Peterson, H, Profiti, G, Rice, P, Romano, P, Roncaglia, P, Saidi, R, Schafferhans, A, Schwämmle, V, Smith, C, Sperotto, M M, Stockinger, H, Vařeková, R S, Tosatto, S C E, de la Torre, V, Uva, P, Via, A, Yachdav, G, Zambelli, F, Vriend, G, Rost, B, Parkinson, H, Løngreen, P & Brunak, S 2016, ' Tools and data services registry : a community effort to document bioinformatics resources ', Nucleic Acids Research, vol. 44, no. D1, pp. D38-D47 . https://doi.org/10.1093/nar/gkv1116
Ison, J, Rapacki, K, Ménager, H, Kalaš, M, Rydza, E, Chmura, P, Anthon, C, Beard, N, Berka, K, Bolser, D, Booth, T, Bretaudeau, A, Brezovsky, J, Casadio, R, Cesareni, G, Coppens, F, Cornell, M, Cuccuru, G, Davidsen, K, Vedova, G D, Dogan, T, Doppelt-Azeroual, O, Emery, L, Gasteiger, E, Gatter, T, Goldberg, T, Grosjean, M, Grüning, B, Helmer-Citterich, M, Ienasescu, H, Ioannidis, V, Jespersen, M C, Jimenez, R, Juty, N, Juvan, P, Koch, M, Laibe, C, Li, J-W, Licata, L, Mareuil, F, Mičetić, I, Friborg, R M, Moretti, S, Morris, C, Möller, S, Nenadic, A, Peterson, H, Profiti, G, Rice, P, Romano, P, Roncaglia, P, Saidi, R, Schafferhans, A, Schwämmle, V, Smith, C, Sperotto, M M, Stockinger, H, Vařeková, R S, Tosatto, S C E, de la Torre, V, Uva, P, Via, A, Yachdav, G, Zambelli, F, Vriend, G, Rost, B, Parkinson, H, Løngreen, P & Brunak, S 2016, ' Tools and data services registry : a community effort to document bioinformatics resources ', Nucleic Acids Research, vol. 44, no. D1, pp. D38–D47 . https://doi.org/10.1093/nar/gkv1116
Nucleic Acids Research, 2016, 44 (D1), pp.D38-47. ⟨10.1093/nar/gkv1116⟩
Nucleic Acids Research, 44, D1, pp. D38-47
Nucleic Acids Research, 44, D38-47
Nucleic Acids Research D1 (44), D38-47. (2016)
Ison, J, Rapacki, K, Ménager, H, Kalaš, M, Rydza, E K, Chmura, P J, Anthon, C, Beard, N, Berka, K, Bolser, D, Booth, T, Bretaudeau, A, Brezovsky, J, Casadio, R, Cesareni, G, Coppens, F, Cornell, M, Cuccuru, G, Davidsen, K, Vedova, G D, Dogan, T, Doppelt-Azeroual, O, Emery, L, Gasteiger, E, Gatter, T, Goldberg, T, Grosjean, M, Grüning, B, Helmer-Citterich, M, Ienasescu, H, Ioannidis, V, Jespersen, M C, Jimenez, R, Juty, N, Juvan, P, Koch, M, Laibe, C, Li, J-W, Licata, L, Mareuil, F, Mičetić, I, Friborg, R M, Moretti, S, Morris, C, Möller, S, Nenadic, A, Peterson, H, Profiti, G, Rice, P, Romano, P, Roncaglia, P, Saidi, R, Schafferhans, A, Schwämmle, V, Smith, C, Sperotto, M M, Stockinger, H, Vařeková, R S, Tosatto, S C E, de la Torre, V, Uva, P, Via, A, Yachdav, G, Zambelli, F, Vriend, G, Rost, B, Parkinson, H, Løngreen, P & Brunak, S 2016, ' Tools and data services registry : a community effort to document bioinformatics resources ', Nucleic Acids Research, vol. 44, no. D1, gkv1116, pp. D38-D47 . https://doi.org/10.1093/nar/gkv1116

Contains fulltext : 171819.pdf (Publisher’s version ) (Open Access) Life sciences are yielding huge data sets that underpin scientific discoveries fundamental to improvement in human health, agriculture and the environment. In support of these disc

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::dd8457ae21de33144fc2f1f757586721