Effect of soil sample preservation, compared to the effect of other environmental variables, on bacterial and eukaryotic diversity

Autor: Vesela A. Tzeneva, Peter Kuikman, Natalia Naumova, Jan Dolfing, Hauke Smidt, Joana Falcão Salles, Willem M. de Vos

Publikováno v: Research in Microbiology
Research in Microbiology, Elsevier, 2009, 160 (2), pp.89-98. ⟨10.1016/j.resmic.2008.12.001⟩
Research in Microbiology, 160(2), 89-98
Research in Microbiology 160 (2009) 2

Archived soil samples are a valuable source for retrospective ecological studies, and their recent analysis using molecular ecological approaches has drawn significant attention within the scientific community. However, the possibility of addressing

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::99727ea6ffbda6b651a36ef64b894891
https://doi.org/10.1016/j.resmic.2008.12.001

Occurence of methanogenesis during start-up of a full-scale synthesis gas-fed reactor treating sulfate and metal-rich wastewater

Autor: Alfons J. M. Stams, Vesela A. Tzeneva, Bernd H. G. W. van Houten, Hauke Smidt, Kees Roest, Henk Dijkman

Publikováno v: Water Research, 40(3), 553-560
Water Research 40 (2006) 3

The start-up of a full-scale synthesis gas-fed gas-lift reactor treating metal and sulfate-rich wastewater was investigated. Sludge from a pilot-scale reactor was used to seed the full-scale reactor. The main difference in design between the pilot- a

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::cd59cddf7ad74be920eadd5573c5bb47
https://doi.org/10.1016/j.watres.2005.12.004

Phenotypic and genomic diversity of Lactobacillus plantarum strains isolated from various environmental niches

Autor: Michiel Kleerebezem, Johan E. T. van Hylckama Vlieg, Vesela A. Tzeneva, Hoa T. K. Phan, Douwe Molenaar, Marjo J. C. Starrenburg, J. L. W. Rademaker, Roland J. Siezen, Michiel Wels, Anna Castioni

Publikováno v: Environmental Microbiology 12 (2010) 3
Environmental Microbiology, 12(3), 758-773
Environmental Microbiology, 12, 3, pp. 758-73
Environmental Microbiology, 12(3), 758-773. Wiley-Blackwell
Siezen, R J, Tzeneva, V A, Castioni, A, Wels, M, Phan, H T K, Rademaker, J L W, Starrenburg, M J C, Kleerebezem, M, Molenaar, D & van Hylckama Vlieg, J E T 2010, ' Phenotypic and genomic diversity of Lactobacillues plantarum strains isolated from various environmental niches. ', Environmental Microbiology, vol. 12, no. 3, pp. 758-773 . https://doi.org/10.1111/j.1462-2920.2009.02119.x
Environmental Microbiology, 12, 758-73

Item does not contain fulltext Lactobacillus plantarum is a ubiquitous microorganism that is able to colonize several ecological niches, including vegetables, meat, dairy substrates and the gastro-intestinal tract. An extensive phenotypic and genomic

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::3944d0a7242c5e99468c116b7a4d4789
https://research.wur.nl/en/publications/phenotypic-and-genomic-diversity-of-lactobacillus-plantarum-strai

16S rRNA targeted DGGE fingerprinting of microbial communities

Autor: Wilma Akkermans van Vliet, Willem M. de Vos, Vesela A. Tzeneva, Hauke Smidt, Hans G.H.J. Heilig, Antoon D. L. Akkermans

Publikováno v: Environmental Genomics. Humana Press
Environmental Genomics
Environmental Genomics ISBN: 9781588297778

The past decades have seen the staggering development of molecular microbial ecology as a discipline that uses the detection of so-called biomarkers to monitor microbial communities in environment samples. A variety of molecules can be used as biomar

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::114f8fb1f1905b29a99a4a8714f3c937
https://research.wur.nl/en/publications/16s-rrna-targeted-dgge-fingerprinting-of-microbial-communities

Development and application of a selective PCR-denaturing gradient gel electrophoresis approach to detect a recently cultivated Bacillus group predominant in soil

Autor: Vesela A. Tzeneva, Willem M. de Vos, Hauke Smidt, Antoon D. L. Akkermans, Youguo Li, Andreas Felske, Elaine E. Vaughan

Publikováno v: Applied and Environmental Microbiology 70 (2004) 10
Applied and Environmental Microbiology, 70(10), 5801-5809

The worldwide presence of a hitherto-nondescribed group of predominant soil microorganisms related to Bacillus benzoevorans was analyzed after development of two sets of selective primers targeting 16S rRNA genes in combination with denaturing gradie

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::997c796c987b7ffa81297cccc0e7861f
https://pubmed.ncbi.nlm.nih.gov/15466517