Zobrazeno 1 - 10
of 23
pro vyhledávání: '"Veronika A. Herzog"'
Autor:
Pooja Bhat, Luis E. Cabrera-Quio, Veronika A. Herzog, Nina Fasching, Andrea Pauli, Stefan L. Ameres
Publikováno v:
Cell Reports, Vol 42, Iss 2, Pp 112070- (2023)
Summary: The maternal-to-zygotic transition (MZT) is a key developmental process in metazoan embryos that involves the activation of zygotic transcription (ZGA) and degradation of maternal transcripts. We employed metabolic mRNA sequencing (SLAMseq)
Externí odkaz:
https://doaj.org/article/ec36637bfce24c3eb1f076ea8b1bdba9
Autor:
Tobias Neumann, Veronika A. Herzog, Matthias Muhar, Arndt von Haeseler, Johannes Zuber, Stefan L. Ameres, Philipp Rescheneder
Publikováno v:
BMC Bioinformatics, Vol 20, Iss 1, Pp 1-16 (2019)
Abstract Background Methods to read out naturally occurring or experimentally introduced nucleic acid modifications are emerging as powerful tools to study dynamic cellular processes. The recovery, quantification and interpretation of such events in
Externí odkaz:
https://doaj.org/article/39292a6c04f248eeb835ced54223a359
Autor:
Pooja Bhat, Luis E. Cabrera-Quio, Veronika A. Herzog, Nina Fasching, Andrea Pauli, Stefan L. Ameres
Publikováno v:
bioRxiv
The maternal-to-zygotic transition (MZT) is a key developmental process in metazoan embryos that involves the activation of zygotic transcription (ZGA) and degradation of maternal transcripts. We employed metabolic mRNA sequencing (SLAMseq) to deconv
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::9959a5e575ee111b7f579ced53fd6d95
https://doi.org/10.1101/2022.06.01.494399
https://doi.org/10.1101/2022.06.01.494399
Publikováno v:
Methods in Molecular Biology ISBN: 9781071618509
Gene expression is controlled at multiple levels, including RNA transcription and turnover. But determining the relative contributions of RNA biogenesis and decay to the steady-state abundance of cellular transcripts remains challenging because conve
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::e71275fc565bede13b1b840cb5753d63
https://doi.org/10.1007/978-1-0716-1851-6_17
https://doi.org/10.1007/978-1-0716-1851-6_17
Publikováno v:
Methods in molecular biology (Clifton, N.J.). 2404
Gene expression is controlled at multiple levels, including RNA transcription and turnover. But determining the relative contributions of RNA biogenesis and decay to the steady-state abundance of cellular transcripts remains challenging because conve
Publikováno v:
Methods Enzymol
Methods in Enzymology ISBN: 9780128235737
mRNA 3' End Processing and Metabolism
Methods in Enzymology
Methods in Enzymology-mRNA 3' End Processing and Metabolism
Methods in Enzymology ISBN: 9780128235737
mRNA 3' End Processing and Metabolism
Methods in Enzymology
Methods in Enzymology-mRNA 3' End Processing and Metabolism
Alternative cleavage and polyadenylation generates mRNA 3' isoforms in a cell type-specific manner. Due to finite available RNA sequencing data of organisms with vast cell type complexity, currently available gene annotation resources are incomplete,
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::bed0a0761b084eecf6fb9b1ae646e1d9
https://europepmc.org/articles/PMC7611212/
https://europepmc.org/articles/PMC7611212/
Autor:
Klara Weipoltshammer, Sarah Stummer, Katrin Friederike Leesch, Andreas Beyer, Fabian Titz-Teixeira, Andrea Pauli, Anastasia Chugunova, Michelle Huth, Christian Schoefer, Laurenz Holcik, Andreas Lackner, Elena Galimberti, Julia Ramesmayer, Stefan L. Ameres, Merrit Romeike, Martin Leeb, Veronika A. Herzog, Marius Garmhausen, Laura Santini, Robert Sehlke, Christa Bücker, Arndt von Haeseler, Austin Smith
Cell fate transitions depend on balanced rewiring of transcription and translation programmes to mediate ordered developmental progression. Components of the nonsense-mediated mRNA decay (NMD) pathway have been implicated in regulating embryonic stem
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::cb5ff0b018de232b8a4f45497db98e7d
https://doi.org/10.1101/2020.07.07.180133
https://doi.org/10.1101/2020.07.07.180133
Publikováno v:
Methods in Molecular Biology ISBN: 9781493998210
Methods Mol Biol
Methods Mol Biol
The varying rates at which mRNAs decay are tightly coordinated with transcriptional changes to shape gene expression during development and disease. But currently available RNA sequencing approaches lack the temporal information to determine the rela
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::762fb5dfe9f3240210cfb377cf13138d
https://doi.org/10.1007/978-1-4939-9822-7_9
https://doi.org/10.1007/978-1-4939-9822-7_9
Autor:
Philipp Rescheneder, Veronika A. Herzog, Thomas R Burkard, Wiebke Wlotzka, Pooja Bhat, Arndt von Haeseler, Stefan L. Ameres, Brian Reichholf, Johannes Zuber, Tobias Neumann
Publikováno v:
Nature methods
Gene expression profiling by high-throughput sequencing reveals qualitative and quantitative changes in RNA species at steady-state but obscures the intracellular dynamics of RNA transcription, processing and decay. We developed thiol(SH)-linked alky
Autor:
Johannes Zuber, Tobias Neumann, Veronika A. Herzog, Katharina Gapp, Wayo Matsushima, Stefan L. Ameres, Eric A. Miska
Analysis of cell-type-specific transcriptomes is vital for understanding the biology of tissues and organs in the context of multicellular organisms. In this Protocol Extension, we combine a previously developed cell-type-specific metabolic RNA label
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::c6ce75deb4fc0d4d74661a3c3ce42871
https://europepmc.org/articles/PMC6997029/
https://europepmc.org/articles/PMC6997029/