The impact of cell states on heterochromatin dynamics.

Autor: Trouth A; Department of Biochemistry and Molecular Genetics, University of Colorado Anschutz Medical Campus, Aurora, CO 80045, U.S.A., Veronezi GMB; Department of Biochemistry and Molecular Genetics, University of Colorado Anschutz Medical Campus, Aurora, CO 80045, U.S.A., Ramachandran S; Department of Biochemistry and Molecular Genetics, University of Colorado Anschutz Medical Campus, Aurora, CO 80045, U.S.A.; RNA Bioscience Initiative, University of Colorado Anschutz Medical Campus, Aurora, CO 80045, U.S.A.

Publikováno v: The Biochemical journal [Biochem J] 2024 Nov 06; Vol. 481 (21), pp. 1519-1533.

An IDR-dependent mechanism for nuclear receptor control of Mediator interaction with RNA polymerase II.

Autor: Zhao H; Department of Biochemistry and Molecular Genetics, University of Colorado Anschutz Medical School, Aurora, CO 80045, USA., Li J; Department of Biochemistry and Molecular Genetics, University of Colorado Anschutz Medical School, Aurora, CO 80045, USA., Xiang Y; Center of Protein Engineering and Therapeutics, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA., Malik S; Laboratory of Biochemistry and Molecular Biology, Rockefeller University, New York, NY 10065, USA., Vartak SV; Lymphocyte Nuclear Biology, NIAMS, NIH, Bethesda, MD 20892, USA., Veronezi GMB; Department of Biochemistry and Molecular Genetics, University of Colorado Anschutz Medical School, Aurora, CO 80045, USA., Young N; Department of Biochemistry and Molecular Genetics, University of Colorado Anschutz Medical School, Aurora, CO 80045, USA., Riney M; Department of Biochemistry and Molecular Genetics, University of Colorado Anschutz Medical School, Aurora, CO 80045, USA., Kalchschmidt J; Lymphocyte Nuclear Biology, NIAMS, NIH, Bethesda, MD 20892, USA., Conte A; Lymphocyte Nuclear Biology, NIAMS, NIH, Bethesda, MD 20892, USA., Jung SK; Biodata Mining and Discovery Section, NIAMS, NIH, Bethesda, MD 20892, USA., Ramachandran S; Department of Biochemistry and Molecular Genetics, University of Colorado Anschutz Medical School, Aurora, CO 80045, USA; RNA Bioscience Initiative, University of Colorado Anschutz Medical School, Aurora, CO 80045, USA., Roeder RG; Laboratory of Biochemistry and Molecular Biology, Rockefeller University, New York, NY 10065, USA., Shi Y; Center of Protein Engineering and Therapeutics, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA., Casellas R; Lymphocyte Nuclear Biology, NIAMS, NIH, Bethesda, MD 20892, USA., Asturias FJ; Department of Biochemistry and Molecular Genetics, University of Colorado Anschutz Medical School, Aurora, CO 80045, USA. Electronic address: francisco.asturias@cuanschutz.edu.

Publikováno v: Molecular cell [Mol Cell] 2024 Jul 25; Vol. 84 (14), pp. 2648-2664.e10. Date of Electronic Publication: 2024 Jul 01.

Small RNA pathways in the nematode Ascaris in the absence of piRNAs.

Autor: Zagoskin MV; Department of Biochemistry and Molecular Genetics, University of Colorado School of Medicine, Aurora, CO, USA.; RNA Bioscience Initiative, University of Colorado School of Medicine, Aurora, CO, USA.; Department of Biochemistry and Cellular and Molecular Biology, University of Tennessee, Knoxville, TN, USA., Wang J; Department of Biochemistry and Molecular Genetics, University of Colorado School of Medicine, Aurora, CO, USA. jianbin.wang@utk.edu.; RNA Bioscience Initiative, University of Colorado School of Medicine, Aurora, CO, USA. jianbin.wang@utk.edu.; Department of Biochemistry and Cellular and Molecular Biology, University of Tennessee, Knoxville, TN, USA. jianbin.wang@utk.edu.; UT-ORNL Graduate School of Genome Science and Technology, University of Tennessee, Knoxville, TN, USA. jianbin.wang@utk.edu., Neff AT; Department of Biochemistry and Molecular Genetics, University of Colorado School of Medicine, Aurora, CO, USA., Veronezi GMB; Department of Biochemistry and Molecular Genetics, University of Colorado School of Medicine, Aurora, CO, USA., Davis RE; Department of Biochemistry and Molecular Genetics, University of Colorado School of Medicine, Aurora, CO, USA. richard.davis@cuanschutz.edu.; RNA Bioscience Initiative, University of Colorado School of Medicine, Aurora, CO, USA. richard.davis@cuanschutz.edu.

Publikováno v: Nature communications [Nat Commun] 2022 Feb 11; Vol. 13 (1), pp. 837. Date of Electronic Publication: 2022 Feb 11.

Sodium valproate and 5-aza-2'-deoxycytidine differentially modulate DNA demethylation in G1 phase-arrested and proliferative HeLa cells.

Autor: Rocha MA; Department of Structural and Functional Biology, Institute of Biology, University of Campinas (UNICAMP), 13083-862, Campinas, SP, Brazil., Veronezi GMB; Department of Structural and Functional Biology, Institute of Biology, University of Campinas (UNICAMP), 13083-862, Campinas, SP, Brazil., Felisbino MB; Department of Structural and Functional Biology, Institute of Biology, University of Campinas (UNICAMP), 13083-862, Campinas, SP, Brazil., Gatti MSV; Department of Genetics, Evolution, Microbiology and Immunology, Institute of Biology, University of Campinas (UNICAMP), 13083-862, Campinas, SP, Brazil., Tamashiro WMSC; Department of Genetics, Evolution, Microbiology and Immunology, Institute of Biology, University of Campinas (UNICAMP), 13083-862, Campinas, SP, Brazil., Mello MLS; Department of Structural and Functional Biology, Institute of Biology, University of Campinas (UNICAMP), 13083-862, Campinas, SP, Brazil. mlsmello@unicamp.br.

Publikováno v: Scientific reports [Sci Rep] 2019 Dec 03; Vol. 9 (1), pp. 18236. Date of Electronic Publication: 2019 Dec 03.