Deep sequencing reveals the complex and coordinated transcriptional regulation of genes related to grain quality in rice cultivars

Autor: An Gynheung, Ning Yuese, Nobuta Kan, Beló André, Sreerekha MV, Venu RC, Meyers Blake C, Wang Guo-Liang

Publikováno v: BMC Genomics, Vol 12, Iss 1, p 190 (2011)

Abstract Background Milling yield and eating quality are two important grain quality traits in rice. To identify the genes involved in these two traits, we performed a deep transcriptional analysis of developing seeds using both massively parallel si

Externí odkaz: https://doaj.org/article/3829a9c5fca74d5aa9dd673ecee49939

Deep and comparative analysis of the mycelium and appressorium transcriptomes of Magnaporthe grisea using MPSS, RL-SAGE, and oligoarray methods.

Autor: Gowda, Malali¹ mgowda@ncsu.edu, Venu, RC¹ reddyvari-channa.1@osu.edu, Raghupathy, Mohan B¹ mohanbabu_r@yahoo.com, Nobuta, Kan² nobuta@dbi.udel.edu, Li, Huameng¹ huameng@yahoo.com, Wing, Rod³ rwing@Ag.arizona.edu, Stahlberg, Eric⁴ eas@osc.edu, Couglan, Sean⁵ sjcoughlan@comcast.net, Haudenschild, Christian D⁶ chrish@solexa.com, Dean, Ralph⁷ radean2@ncsu.edu, Nahm, Baek-Hie⁸ bhnahm@gmail.com, Meyers, Blake C² meyers@dbi.udel.edu, Wang, Guo-Liang¹ wang.620@osu.edu

Publikováno v: BMC Genomics. 2006, Vol. 7, p1-15. 15p. 2 Diagrams, 5 Charts, 1 Graph.

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Identification of candidate genes associated with positive and negative heterosis in rice.

Autor: Venu RC; Dale Bumpers National Rice Research Center (DB NRRC), Agricultural Research Service, United States Department of Agriculture (USDA-ARS), Stuttgart, Arkansas, United States of America; Rice Research and Extension Center, University of Arkansas Division of Agriculture, Stuttgart, Arkansas, United States of America; Department of Plant Pathology, Ohio State University, Columbus, Ohio, United States of America., Ma J; Dale Bumpers National Rice Research Center (DB NRRC), Agricultural Research Service, United States Department of Agriculture (USDA-ARS), Stuttgart, Arkansas, United States of America; Rice Research and Extension Center, University of Arkansas Division of Agriculture, Stuttgart, Arkansas, United States of America., Jia Y; Dale Bumpers National Rice Research Center (DB NRRC), Agricultural Research Service, United States Department of Agriculture (USDA-ARS), Stuttgart, Arkansas, United States of America., Liu G; Dale Bumpers National Rice Research Center (DB NRRC), Agricultural Research Service, United States Department of Agriculture (USDA-ARS), Stuttgart, Arkansas, United States of America; Rice Research and Extension Center, University of Arkansas Division of Agriculture, Stuttgart, Arkansas, United States of America., Jia MH; Dale Bumpers National Rice Research Center (DB NRRC), Agricultural Research Service, United States Department of Agriculture (USDA-ARS), Stuttgart, Arkansas, United States of America., Nobuta K; Delaware Biotechnology Institute, University of Delaware, Newark, Delaware, United States of America., Sreerekha MV; Department of Plant Pathology, Ohio State University, Columbus, Ohio, United States of America., Moldenhauer K; Rice Research and Extension Center, University of Arkansas Division of Agriculture, Stuttgart, Arkansas, United States of America., McClung AM; Dale Bumpers National Rice Research Center (DB NRRC), Agricultural Research Service, United States Department of Agriculture (USDA-ARS), Stuttgart, Arkansas, United States of America., Meyers BC; Delaware Biotechnology Institute, University of Delaware, Newark, Delaware, United States of America., Wang GL; Department of Plant Pathology, Ohio State University, Columbus, Ohio, United States of America.

Publikováno v: PloS one [PLoS One] 2014 Apr 17; Vol. 9 (4), pp. e95178. Date of Electronic Publication: 2014 Apr 17 (Print Publication: 2014).

Identification and characterization of in planta-expressed secreted effector proteins from Magnaporthe oryzae that induce cell death in rice.

Autor: Chen S; State Laboratory for Biology of Plant Diseases and Insect Pests, Institute of Plant Protection, Chinese Academy of Agricultural Sciences, Beijing 100193, China., Songkumarn P, Venu RC, Gowda M, Bellizzi M, Hu J, Liu W, Ebbole D, Meyers B, Mitchell T, Wang GL

Publikováno v: Molecular plant-microbe interactions : MPMI [Mol Plant Microbe Interact] 2013 Feb; Vol. 26 (2), pp. 191-202.